Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq12 86.0 6e-12 >seq12 Length=1121147 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| ||||||| || | || || | |||||||| | Sbjct 44484 ATGCAAATCTTCGTTAAAACTCTAACCGGGAAGACCATAACCCTAGAAGTCGAGAGCTCT 44425 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| ||||| | || || || || || || ||||| || || ||||||||| Sbjct 44424 GATACCATCGACAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATTCCCCCCGATCAG 44365 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || || ||||| | || |||||| ||| | || || | |||| | |||| ||||| Sbjct 44364 CAGAGGCTCATCTTCGCCGGCAAGCAATTGGAGGACGGCAGAACCCTAGGCGACTACAAC 44305 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || || ||||| || |||| || || | ||||||| || || Sbjct 44304 ATCCAGAAGGAATCAACTCTTCACTTGGTTCTGCGATTGAGGGGTGG 44258 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/233 (68%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 25170 ACAA-CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAA 25228 |||| |||||| || || || ||||| ||||||| || | ||||| |||| || || Sbjct 45174 ACAATCATGCAGGTCTTCGTCAAAACCCTAACCGGCAAGACAATCACTCTCGAGGTGGAG 45115 Query 25229 GCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCC 25288 | || || ||||| | || || || || || || ||||| || || ||| Sbjct 45114 AGCTCTGACACAATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGAATTCCCCCC 45055 Query 25289 GATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGAT 25348 |||||||| || ||||| | || |||||| ||| | || || | |||| | |||| Sbjct 45054 GATCAGCAGAGGCTCATCTTCGCCGGCAAGCAATTGGAGGACGGCAGAACCCTAGGCGAC 44995 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || || || ||||| || |||| || || | ||||||| || || Sbjct 44994 TACAACATCCAGAAGGAATCAACTCTTCACTTGGTTCTGCGATTGAGGGGTGG 44942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445048978116480