Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3 113 1e-19 seq6 102 2e-16 seq4 102 2e-16 seq1 100 6e-16 seq7 98.7 2e-15 seq5 98.7 2e-15 seq2 98.7 2e-15 >seq3 Length=27368013 Score = 113 bits (124), Expect = 1e-19 Identities = 583/908 (64%), Gaps = 39/908 (4%) Strand=Plus/Plus Query 229750 TTCTCTGCGTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCA 229809 |||| | |||||| |||||||| || || || ||||| |||||||||||||| | ||| Sbjct 26802953 TTCTGTATGTTCCCGATCCAATACCCGGAAATCTGGGAGATGTACAAGAAGGCCGAGGCC 26803012 Query 229810 ACTTTCTGGACCACTGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAAA 229869 | ||||||||| | ||||| ||| ||| | ||| | | | ||| |||| Sbjct 26803013 TCCTTCTGGACCGCCGAGGAGGTTGATCTCTGCCAGGACCTACGCCATTGG-----GAAA 26803067 Query 229870 CTCAA-----TGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCT 229924 ||| | || ||| ||| || ||||||| ||| | || | || ||||| | || Sbjct 26803068 CTCTAACCCCTGGCGA-GAAG--CACTTCATCACCCACGTGCTCGCCTTCTTCGCTGCCT 26803124 Query 229925 CCGATGGTATTGTGATGGAAAATCT-GCAGACCAACTTTAGTGT-GGAAGTAACGGTTCC 229982 | || || || || |||| ||||| || | || || || |||||| ||| | Sbjct 26803125 CTGACGGCATCGTTTTGGAGAATCTTGCCGG--AAGGTTCATGAAGGAAGTCCAGGTCTC 26803182 Query 229983 AGAGGCACGGCAATTTTATGCTTACCAAACATTCAACGAATCTATCCATTCTGAACAATA 230042 ||||| || || || | | ||| | || ||| ||||| || || || Sbjct 26803183 CGAGGCTCGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTA 26803242 Query 230043 TGCTCTGCTTATCGACGCGCTTATTTCCGACGAGCAAGAACGGAACGAGCTTTTTGATGC 230102 || ||| | || | || ||| | | || |||| ||||||| | || Sbjct 26803243 CAGCCTCCTTCTGGAGACCTACATCAAGGACTCGGACGAGAAGAACAGGCTTTTTCACGC 26803302 Query 230103 CATTGAAAACAT-CCCGGCGGTTCAT-AACAAGGCAAAGTGGGCTCAGAAATGGCTAGAA 230160 ||| || | ||| ||| ||| ||| || ||||| ||||||| | ||| | || Sbjct 26803303 CATCGATACCATTCCCTGCG--TCACGAAGAAGGCCCAGTGGGCCCTACGCTGGATCGA- 26803359 Query 230161 CCTGGTAA--ATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGT 230218 | | | | ||||||||| ||||| |||| |||| | || || ||||| || | | Sbjct 26803360 -CGGCTCAGAATCGTTTGCGGAGCGGATCGTGGCCTTTGCTTGCGTGGAAGGGATATTCT 26803418 Query 230219 TTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCT-- 230276 | || || ||||| ||||| || |||||||| ||| || | ||||| || || Sbjct 26803419 TCTCGGGCAGTTTTTGCGCGATATTTTGGCTAAAGAAGCGCGGGTTAATGCCGGGACTGA 26803478 Query 230277 CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCT 230336 || ||| | |||||||| ||| || || |||||| | || | |||| || ||| Sbjct 26803479 CGTTCT--CAAACGAGTTAATCTCGCGAGATGAGGGTTTGCACTGCGACTTCG-CGTGCT 26803535 Query 230337 TA-TGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGA--CG-GTCAAACAAATCATTA 230392 | |||| || ||| ||| ||||| |||| || || || ||||| Sbjct 26803536 TGCTGTACTCGCTGCTGAGGAAGAAGCTGAG---CGAGGATCGAGTGAAGTCGATCATAC 26803592 Query 230393 CAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTG 230452 | | || || || | || | |||||| | || || || | || || |||| || || Sbjct 26803593 GAAACGCGGTGGAGATAGAGAGAGAGTTCGTGTGCGAAGCCTTACCGTG-CGCCCTAGTG 26803651 Query 230453 GC-ATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 | ||||||| || || ||| | ||||||||||| ||||| || || | | | | | Sbjct 26803652 GGGATGAACGGCGATCTGATGAGCCAGTACATCGAGTTCGTGGCGGATAGGCTGCTGGGT 26803711 Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571 | ||||| ||| ||| | ||||| ||||||| || | | |||||||| || Sbjct 26803712 GAGCTTGGGTACTCGAAGATTTACAATGTGCAGAACCCGTTCGATTGGATGGAGCTGATC 26803771 Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631 || || ||||||||||| |||||||| ||| | || | || || |||| | || Sbjct 26803772 AGCCTGCAGGGGAAGACCAATTTCTTCGAGAAGAGGGTTGGGGAGTACCAGAAGGCTTCA 26803831 Query 230632 GTGATGAA 230639 |||||||| Sbjct 26803832 GTGATGAA 26803839 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 27056499 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 27056558 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 27056559 CCCCACGGTGGGC 27056571 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 4348329 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4348388 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4348389 CCCACGGTGGGC 4348400 >seq6 Length=30767194 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 6645230 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 6645171 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 6645170 GCCCCACGGTGGGC 6645157 >seq4 Length=25843236 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 24320810 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 24320869 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 24320870 GCCCCACGGTGGGC 24320883 >seq1 Length=47851208 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 23075603 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 23075544 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 23075543 CCCCACGGTGGGC 23075531 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 23075787 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 23075728 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 23075727 CCCCACGGTGGGC 23075715 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 3619203 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3619262 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3619263 CCCACGGTGGGC 3619274 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 5809752 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 5809811 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5809812 CCCACGGTGGGC 5809823 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 31682527 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 31682468 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 31682467 CCCACGGTGGGC 31682456 Score = 84.2 bits (92), Expect = 5e-11 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 165714 GTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCA 165773 |||||||||||| |||||||||| || | |||| || |||||||||||||||||||||| Sbjct 23075964 GTCTAGCTCAGTTGGTAGAGCGCAAGG-TCTTAACCTTGTGGTCGTGGGTTCGAGCCCCA 23075906 Query 165774 CGATGGGC 165781 || ||||| Sbjct 23075905 CGGTGGGC 23075898 >seq7 Length=22388614 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 9128009 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 9128068 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9128069 CCCACGGTGGGC 9128080 >seq5 Length=18496696 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 6291735 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 6291676 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6291675 CCCACGGTGGGC 6291664 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 9409612 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 9409553 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9409552 CCCACGGTGGGC 9409541 >seq2 Length=30405870 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 21701298 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 21701239 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 21701238 CCCACGGTGGGC 21701227 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 25738921 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 25738980 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 25738981 CCCACGGTGGGC 25738992 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771 ||||||| ||||||||||||||||| || || |||| || |||||| ||||||||||||| Sbjct 21678795 CCGTCTAACTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCATGGGTTCGAGCCC 21678736 Query 165772 CACGATGGGC 165781 || | ||||| Sbjct 21678735 CATGGTGGGC 21678726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821397752960