Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 seq4 82.4 7e-11 >seq2 Length=30405870 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | || || ||||||||||| ||||| || || ||| | | Sbjct 22653687 ATGCAGATCTTTGTTAAGACCTTGACGGGCAAGACCATCACTCTTGATGTGGAGAGCTCT 22653628 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| ||| ||| ||||| ||||| | || || ||| Sbjct 22653627 GATACCATAGGCAATGTGAAGGCAAAGATTCAAGATAAGGAAGGGATCCCACCTGACCAA 22653568 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||||| ||||| ||||| || || || || || ||| || ||| |||| ||||| ||| Sbjct 22653567 CAAAGGCTTATTTTTGCAGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCAGATTATAAT 22653508 Query 29142 ATTCAGAAGGAATCTACT 29159 || ||||||||||||||| Sbjct 22653507 ATCCAGAAGGAATCTACT 22653490 >seq4 Length=25843236 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| ||||| | ||||| |||| || ||||||||||| ||| |||| | | Sbjct 12721890 ATGCAGATATTTGTGAAAACTCTGACCGGGAAAACCATTACTCTGGAAGTGGAAAGCTCT 12721949 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || ||||| ||||| || || || ||| | ||| ||| || Sbjct 12721950 GATACTATTGATAATGTTAAGGCCAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 12722009 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| ||||| || || || ||| | || | || || ||||| Sbjct 12722010 CAGAGGTTGATCTTTGCAGGCAAGCAGCTCGAGGATGGAAGGACCCTTGCTGACTACAAC 12722069 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 ||||| ||||| || ||||| ||| ||||| | ||| | || || ||| Sbjct 12722070 ATTCAAAAGGAGTCCACTCTGCACTTGGTGCTTCGACTGCGTGGTGGG 12722117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428334997693760