Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02]
192 sequences; 227,569,171 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq7 109 8e-19
seq4 95.1 2e-14
seq2 89.7 8e-13
seq6 84.2 3e-11
>seq7
Length=22388614
Score = 109 bits (120), Expect = 8e-19
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107
||||| || || || || || |||| || | || || || || || |||||||||
Sbjct 12116138 GTTCCTCCCCTCAGCCTCAAAACCAGGTGAAGCGTTGACTCCTTCTGGATGTTATAATCT 12116197
Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167
| |||||||| || ||| || ||||| || ||||||||||||||||| |||||||| |||
Sbjct 12116198 GCAAGAGTTCGGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTGATCAGGA 12116257
Query 146168 GGAATTCCTTCTTTATCTTG 146187
|| || ||||| ||||| ||
Sbjct 12116258 GGGATGCCTTCCTTATCCTG 12116277
>seq4
Length=25843236
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107
||||| || || || || || ||||| || | | || || || || |||||||||
Sbjct 7555406 GTTCCTCCCCTCAGCCTCAAAACCAAGTGAAGCATCGACTCCTTTTGGATGTTATAATCT 7555465
Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167
| |||||||| | ||| || ||||| || |||||||||||||||| ||| || || |||
Sbjct 7555466 GCAAGAGTTCGACCATCTTCCAATTGCTTACCAGCAAAAATCAATCGTTGTTGGTCAGGA 7555525
Query 146168 GGAATTCCTTCTTTATCTTG 146187
|| || ||||| ||||| ||
Sbjct 7555526 GGGATGCCTTCCTTATCCTG 7555545
>seq2
Length=30405870
Score = 89.7 bits (98), Expect = 8e-13
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| | ||| | | || | ||| ||||||||||| || |||||||||||||
Sbjct 22653459 TTCCACCACGAAGGCGAAGGACAAGATGCAAAGTAGATTCCTTCTGGATATTATAATCTG 22653518
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| ||| |||| ||| || | || ||||| |||||||| | ||||| || || || |
Sbjct 22653519 CCAAAGTCCTGCCATCCTCAAGCTGCTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGTG 22653578
Query 146169 GAATTCCTTCTTTATCTTG 146187
| || ||||| ||||||||
Sbjct 22653579 GGATCCCTTCCTTATCTTG 22653597
Score = 86.0 bits (94), Expect = 9e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155
||||||||||| | ||| || || | ||| |||| || |||||||||||||| | ||
Sbjct 22653734 ATATTATAATCAGCAAGGGTCCTACCATCCTCTAGCTGCTTTCCAGCAAAAATAAGCCTC 22653793
Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
||||| || ||||| ||||||| |||||||||
Sbjct 22653794 TGCTGGTCAGGAGGGATTCCTTGTTTATCTTG 22653825
>seq6
Length=30767194
Score = 84.2 bits (92), Expect = 3e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 146074 ATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTG 146133
||| || || ||||| || || ||||||| | ||| || || | ||| |||| ||
Sbjct 19728819 ATGCAAGGTGGATTCCTTCTGGATGCTATAATCAGCAAGGGTCCTACCATCCTCTAGCTG 19728760
Query 146134 TTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|||||||||||||| | || ||||| || ||||| |||||||||||||||||
Sbjct 19728759 CTTTCCAGCAAAAATAAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTATCTTG 19728706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743524615536640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |