Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq4 116 3e-21 seq6 98.7 8e-16 >seq4 Length=25843236 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| || |||||| ||||| ||||||||| || | | || ||| Sbjct 12760852 ACCAAGTGCAGGGTCGACTCCTTTTGAATATTGTAGTCGGCAAGGGTCCTTCCATCCTCC 12760911 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || |||||||||| ||| ||||| ||||| | ||||||||||||| Sbjct 12760912 AGCTGCTTGCCTGCAAATATCAACCTCTGCTGGTCTGGAGGGATACCCTCCTTGTCCTGG 12760971 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | || | ||||| |||| ||||||||||| Sbjct 12760972 ATTTTGGCCTTCACATTGTCAATAGTATCTGAGCTTTCCACTTCCAAAGTAATCGTCTTC 12761031 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||| ||||||||||||||||| Sbjct 12761032 CCAGTCAAAGTTTTCACAAAGATTTGCAT 12761060 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| ||||||||| ||||||||||| || || | || ||| Sbjct 1214373 ACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCC 1214432 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| || || ||||||| || ||||| || || | ||||||||||||| Sbjct 1214433 AGCTGCTTTCCTGCAAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGG 1214492 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| | ||| ||||||| || || ||||| Sbjct 1214493 ATCTTCGCCTTGACATTGTCAATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTT 1214552 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| ||||||||||| || ||||| Sbjct 1214553 CCCGTCAGGGTCTTCACAAAAATCTGCAT 1214581 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||| || || | | || || || || || ||||| || Sbjct 12722309 CTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCGAGCTGCTTACCGGCAAA 12722250 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || ||| ||||| ||||| | |||||||||||| ||| || ||| || Sbjct 12722249 GATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATT 12722190 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||| || ||||||||||| || || |||||||| |||||||||||||| Sbjct 12722189 ATCAATTGTATCCGAACTCTCCACCTCCAACGTTATGGTCTTGCCAGTCAGAGTCTTCAC 12722130 Query 45325 AAAGATTTGCAT 45336 |||||| ||||| Sbjct 12722129 AAAGATCTGCAT 12722118 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||| || || | |||| ||||| || || ||||| || Sbjct 12760641 CTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCGTCCTCCAGCTGCTTACCGGCAAA 12760700 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || ||| ||||| ||||| | ||||||||||| ||| || || || Sbjct 12760701 GATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGAATCTTGGCTTTCACATT 12760760 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | || || ||||||||||| || |||||||| || |||||||||||||| Sbjct 12760761 ATCAATGGTATCAGAACTCTCCACCTCCAAAGTTATCGTCTTCCCAGTCAGAGTCTTCAC 12760820 Query 45325 AAAGATTTGCAT 45336 |||||| ||||| Sbjct 12760821 AAAGATCTGCAT 12760832 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| ||||||||||| || |||| | || || Sbjct 12707429 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCATCCTCG 12707370 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| || || || | || ||| ||||| || || | |||||||||||| Sbjct 12707369 AGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGG 12707310 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | | ||| | || || |||| ||| || ||||| Sbjct 12707309 ATCTTTGCCTTGACATTGTCAATGGTATCCGAGCTTTCAACTTCCAAGGTGATTGTCTTC 12707250 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| |||||||||||||| Sbjct 12707249 CCGGTAAGGGTCTTGACAAAGATTTGCAT 12707221 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||||||| || |||| | || || Sbjct 12707657 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTCA 12707598 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || || | || ||| ||||| || || | |||||||||||| Sbjct 12707597 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 12707538 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | | ||| | || || |||| ||| || ||||| Sbjct 12707537 ATCTTTGCCTTGACATTGTCAATGGTATCCGAGCTTTCAACTTCCAAGGTGATTGTCTTC 12707478 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| |||||||||||||| Sbjct 12707477 CCAGTAAGGGTCTTGACAAAGATTTGCAT 12707449 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||||||| || |||| | || || Sbjct 12721414 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTCA 12721355 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| || || || | || ||| ||||| || || | |||||||||||| Sbjct 12721354 AGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 12721295 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | ||| | || || |||| ||| || ||||| Sbjct 12721294 ATCTTTGCCTTGACATTGTCAATAGTATCCGAGCTTTCAACTTCCAAGGTGATTGTCTTC 12721235 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| |||||||||||||| Sbjct 12721234 CCGGTAAGGGTCTTGACAAAGATTTGCAT 12721206 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||| |||||||| || || |||| ||||| || || || || || Sbjct 1214162 CTCCTTCTGAATATTGTAGTCAGCCAAAGTACGGCCGTCCTCCAGCTGCTTCCCTGCAAA 1214221 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||||| ||| ||||| || || | |||||||||||| || || ||| || Sbjct 1214222 GATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 1214281 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||||| | ||| ||||||| || || ||||| || ||||| |||||||| Sbjct 1214282 GTCAATGGTGTCCGAGCTCTCGACCTCCAAAGTGATAGTCTTTCCGGTCAGGGTCTTCAC 1214341 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 1214342 GAAGATCTGCAT 1214353 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| ||||||||| ||||||||||| || || | || || Sbjct 1214601 ACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCG 1214660 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| |||| || ||| ||||| || || | |||||||| || | Sbjct 1214661 AGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGA 1214720 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | | | || | || ||||||| ||| || |||||| Sbjct 1214721 ATCTTAGCCTTAACGTTGTCAATGGTATCGGAGCTTTCGACCTCCAGGGTGATGGTCTTG 1214780 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||| ||||| Sbjct 1214781 CCGGTGAGGGTCTTGACGAAGATCTGCAT 1214809 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||| |||||| ||| | | || |||| || || || || || Sbjct 1213934 CTCCTTCTGGATGTTATAGTCGGCCAGAGTCCTTCCATCCTCCAACTGCTTACCAGCAAA 1213993 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||||| ||| ||||| || || | ||| ||||| ||| || || |||||| Sbjct 1213994 GATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTATCCTGGATCTTGGCCTTAACATT 1214053 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | ||||| | ||||||||||| || || ||||| || |||| |||||||| Sbjct 1214054 GTCGATTGTGTCCGAGCTCTCCACCTCCAACGTGATGGTCTTTCCAGTCAAGGTCTTCAC 1214113 Query 45325 AAAGATTTGCAT 45336 |||||| ||||| Sbjct 1214114 AAAGATCTGCAT 1214125 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | ||| | | |||| |||||| || ||||| || ||||| || ||| Sbjct 12761062 CCACCACGCAACCGAAGCACCAGGTGCAGAGTTGATTCCTTTTGGATGTTATAATCGGCA 12761121 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || || ||||| || || ||||| || | || ||| || || || || Sbjct 12761122 AGGGTGCGGCCATCCTCAAGTTGCTTACCAGCGAAGATTAGCCTCTGCTGATCAGGGGGA 12761181 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||| ||| ||||||| ||| || | | | | ||| | || ||| Sbjct 12761182 ATGCCTTCCTTATCCTGAATTTTTGCCTTTACATTATCTATGGTATCCGAGCTTTCAACC 12761241 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| |||||||| || || || ||||| |||||||||||||| Sbjct 12761242 TCCAAGGTTATCGTCTTCCCAGTTAGTGTCTTGACAAAGATTTGCAT 12761288 >seq6 Length=30767194 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||||| | |||||||||| || ||||| || || ||||||||| Sbjct 23848192 CCACCTCTCAATCGGAGAACCAAGTGCAAAGTCGATTCCTTTTGGATATTGTAGTCGGCA 23848133 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| |||| |||| ||| || |||||||| ||||||| ||| ||||| || || Sbjct 23848132 AGGGTGCGGCCGTCCTCCAATTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGG 23848073 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||||||||| ||||| ||| || | | | | || | ||| || Sbjct 23848072 ATGCCCTCCTTGTCTTGGATTTTGGCCTTCACGTTGTCGATGGTATCAGAGCTCTCGACT 23848013 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | ||| || ||||| || || || || || || ||||| ||||| Sbjct 23848012 TCTAAGGTTATGGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 23847966 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| || | |||||||||| || ||||| || |||||||||||| Sbjct 23848420 CCACCTCTCAGTCGGAGAACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGGCG 23848361 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || |||| |||| ||| |||||||| || ||||||| ||| ||||| || || Sbjct 23848360 AGGGTTCGGCCGTCCTCCAATTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGTGGG 23848301 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||||||||| || || ||| || | | | | || | ||| || Sbjct 23848300 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTATCAGAGCTCTCGACT 23848241 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | ||| || ||||| || || || || || || ||||||||||| Sbjct 23848240 TCTAGGGTTATGGTCTTCCCGGTTAGGGTTTTGACGAAGATTTGCAT 23848194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074275524032