Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 168 1e-36 >seq3 Length=27368013 Score = 168 bits (186), Expect = 1e-36 Identities = 579/873 (66%), Gaps = 51/873 (6%) Strand=Plus/Plus Query 125016 GACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGAT 125075 || || ||||| |||||||| ||||| |||||||||| ||||| | ||| ||||| ||| Sbjct 26802980 GAAATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGTTGAT 26803039 Query 125076 CTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG----TT 125131 || | | ||||||| | ||||||| |||| | || ||| |||||| || Sbjct 26803040 CTCTGCCAGGACCTACGCCATTGGGAAACTC---TAACCC---CTG-GCGAGAAGCACTT 26803092 Query 125132 TATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTT 125191 || | ||| | | |||||||| || | ||| || || ||||| || ||||| | Sbjct 26803093 CATCACCCACGTGCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTTTTGGAGAATCT--T 26803150 Query 125192 GAC--ACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGTGCTTT-TACGGATTC 125246 | | | | ||| | ||| | | ||| || | |||| ||| || || ||||| ||| Sbjct 26803151 GCCGGAAGGTTCA-TGAAG-GAAGTCCAGGTCTCCGAGGC-TCGCGCCTTCTACGGCTTC 26803207 Query 125247 CAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATT 125306 || ||| || |||||| | ||||| || |||||| || | || | ||||| Sbjct 26803208 CAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTGGAGACCTACATC 26803267 Query 125307 CGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTAT-ACG 125365 || || | || ||| ||| ||| |||| ||||| || | || | | ||| Sbjct 26803268 AAGGACTCGGACGAGAAGAACAGGCTTTTTCACGCCATCGATACCATTCCCTGCGTCACG 26803327 Query 125366 TAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACG-ACAAGTCTTCGTACGCCGACA 125424 || ||||| || |||| | || |||||||| | | | || |||| || || Sbjct 26803328 -AAGAAGGCCCAGTGGGCCCTACGCTGGATCGACGGCTCAGAA----TCGTTTGCGGAGC 26803382 Query 125425 GACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCT 125484 | | ||||| || || ||| || || || ||||| ||||| |||||| || || | Sbjct 26803383 GGATCGTGGCCTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGCAGTTTTTGCGCGATAT 26803442 Query 125485 TTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTC 125544 ||||||| ||||||||||| | ||||| ||||||||| | |||||||| || || | Sbjct 26803443 TTTGGCTAAAGAAGCGCGGGTTAATGCCGGGACTGACGTTCTCAAACGAGTTAATCTCGC 26803502 Query 125545 GAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT-TTCGCAACT-ATCTGCGTCC 125602 |||| ||||| | ||||| ||||| || | |||| |||| || | | Sbjct 26803503 GAGATGAGGGTTTGCACTGCGACTTCGCGTGCTTGCTGTACTCGCTGCTGAGGAAGAAGC 26803562 Query 125603 CGAGTGCAGATCCAGCGATGAAAAGGTC-ATCA-ACATTGTAACCGATGCCGTGAGGATA 125660 ||| | |||| || |||| ||| |||| || | ||| || ||| |||| Sbjct 26803563 TGAGCGAGGATCGAG---TGAA---GTCGATCATAC---GAAAC----GCGGTGGAGATA 26803609 Query 125661 GAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTA 125720 || |||||| | |||| || ||||| | | | | || |||||| || | || Sbjct 26803610 GAGAGAGAGTTCGTGTGCGAAGCCTTACCGTGCGCCCTAGTGGGGATGAACGGCGATCTG 26803669 Query 125721 ATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG-TTGATTGGCCGCAA 125779 ||| || ||||||| ||||| ||||| ||| | || ||| ||| ||| | || || Sbjct 26803670 ATGAGCCAGTACATCGAGTTCGTGGCGGATAGGCTGCTGGGTGAGCTTGGGTACTCG-AA 26803728 Query 125780 GATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA--CTAGAGGGTAAG 125837 ||||||||| | |||| || || |||| ||| ||| |||| || |||| ||| Sbjct 26803729 GATTTACAATGTGCAGAACCCGTTCGATTGGATG--GAGCTGATCAGCCTGCAGGGGAAG 26803786 Query 125838 ACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 ||||| || |||||||||| ||| | |||||| Sbjct 26803787 ACCAATTTCTTCGAGAAGAGGGTTGGGGAGTAC 26803819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057421457920