Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 9e-15 seq6 82.4 5e-11 >seq4 Length=25843236 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTC-ATCGT 43970 |||||| || || || ||| ||||||||||| || ||| || | | || ||| | Sbjct 12760851 CACCAAGTGCAGGGTCGACTCCTTTTGAATATTGTAGTCGGC-AAGGGTCCTTCCATCCT 12760909 Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030 ||| || || |||||||||||||||| |||||||| |||| | ||| || || || Sbjct 12760910 CCAGCTGCTTGCCTGCAAATATCAACCTCTGCTGGTCTGGAGGGATACCCTCCTTGTCCT 12760969 Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090 ||||| || || | ||| |||||||| ||||| || | ||||| || | Sbjct 12760970 GGATTTTGGCCTTCACATTGTCAATAGTATCTGAGCTTTCCACTTCCAAAGTAATCGTCT 12761029 Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || || ||||| |||||||| |||||||| Sbjct 12761030 TCCCAGTCAAAGTTTTCACAAAGATTTGCAT 12761060 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTC-ATCGT 43970 |||||| || || ||| ||| |||||||| ||||| || || | | || ||| | Sbjct 12721871 CACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCAGC-AAGGGTCCTTCCATCCT 12721813 Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030 | | || || |||||||| ||||||| |||||||| | || | ||| || || || Sbjct 12721812 CGAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCT 12721753 Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090 ||||| || || || ||| |||||| | ||||| || | ||||| |||| Sbjct 12721752 GGATTTTGGCCTTAACATTATCAATAGTATCAGAGCTTTCCACTTCCAGAGTAATGGTTT 12721693 Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | ||||| | ||| ||||||||||| ||||| Sbjct 12721692 TCCCGGTCAGAGTTTTCACAAATATCTGCAT 12721662 >seq6 Length=30767194 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTG-ACGCTCATCGTCCAATTGTTTTCCTGCAA 43988 |||||| || ||||||||||| | || | ||| |||| || | ||||| || |||| Sbjct 23849069 CTCTTTCTGGATATTATAATC-TGCAAGGGTACGACCATCCTCAAGCTGTTTCCCGGCAA 23849011 Query 43989 ATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCA 44048 | ||||||| ||||||||| | || | || || || ||| ||| || |||||| Sbjct 23849010 AGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCTTGAATCTTAGCTTTGACAT 23848951 Query 44049 TAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCA 44108 | ||| ||| || | ||| || || | ||||| || || || || | ||||||| Sbjct 23848950 TGTCAATAGTGTCAGAGCTCTCAACCTCCAGAGTAATGGTCTTCCCAGTCAGGGTCTTCA 23848891 Query 44109 CAAATATTTGCATG 44122 |||| || |||||| Sbjct 23848890 CAAAAATCTGCATG 23848877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354776769820416