Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 4e-14 >seq4 Length=25843236 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 ||||| || |||||| |||||||||||||| | ||| || | | ||||||||||||| Sbjct 12760630 TGAAGGGTAGACTCCTTCTGAATGTTGTAATCTG-CAAGAGTCCTCCCGTCCTCCAGCTG 12760688 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||||||| | | || | | |||||| ||| || | | |||||||| ||| || Sbjct 12760689 CTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGAATCTT 12760748 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 || | | | |||||||| | | |||| ||| | ||||| || || || || Sbjct 12760749 GGCTTTCACATTATCAATGGTATCAGAACTCTCCACCTCCAAAGTTATCGTCTTCCCAGT 12760808 Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727 ||||| |||||||| ||||||||| Sbjct 12760809 CAGAGTCTTCACAAAGATCTGCATC 12760833 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || |||| || | ||| || || || ||| ||||||||||||||| || ||||| Sbjct 12721889 ACCACCACGCAGCCGGAGCACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCAGC 12721830 Query 48559 CAATTGTCGCTCG-TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 || ||| || ||||| |||||||| || | | || || | |||||| || | Sbjct 12721829 -AAGGGTCCTTCCATCCTCGAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGG 12721771 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677 | | || ||||||||| ||||| ||| | | | || ||||| | ||| Sbjct 12721770 GAATACCCTCCTTGTCCTGGATTTTGGCCTTAACATTATCAATAGTATCAGAGCTTTCCA 12721711 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || |||||||| ||||| |||||||||||||| |||||||| Sbjct 12721710 CTTCCAGAGTAATGGTTTTCCCGGTCAGAGTTTTCACAAATATCTGCAT 12721662 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TCCT 48575 ||| || || || ||| |||||||||||||||||| ||||| || ||| || |||| Sbjct 12722099 CACCAAGTGCAGAGTGGACTCCTTTTGAATGTTGTAGTCAGC-AAGGGTCCTTCCATCCT 12722041 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 | |||||||| || | | || || | |||||| || || | || ||||||||| Sbjct 12722040 CGAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCCT 12721981 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||||| ||| | | | || ||||| | ||| || | || ||||||| Sbjct 12721980 GGATTTTGGCCTTAACATTATCAATAGTATCAGAGCTTTCCACTTCCAGAGTAATGGTTT 12721921 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | ||||| |||||||||||||| |||||||| Sbjct 12721920 TCCCGGTCAGAGTTTTCACAAATATCTGCAT 12721890 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCG-CTCGTCCTCCAGCTG 48582 ||||| || |||||| |||||||||||||| || || ||| | | ||||| ||||| Sbjct 12722320 TGAAGGGTAGACTCCTTCTGAATGTTGTAATCTGC-AAGAGTCCTCCCATCCTCGAGCTG 12722262 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||||||| | | || | | |||||| || || | | ||||||||| ||| || Sbjct 12722261 CTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTT 12722202 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | || ||||| | | |||| ||| | |||||||| || || || Sbjct 12722201 GGCCTTCACATTATCAATTGTATCCGAACTCTCCACCTCCAACGTTATGGTCTTGCCAGT 12722142 Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727 ||||| |||||||| ||||||||| Sbjct 12722141 CAGAGTCTTCACAAAGATCTGCATC 12722117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250214272192