Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq7 114 7e-21 seq3 109 3e-19 seq8 107 1e-18 seq5 105 3e-18 seq4 102 4e-17 seq1 100 1e-16 seq6 95.1 6e-15 >seq7 Length=22388614 Score = 114 bits (126), Expect = 7e-21 Identities = 77/87 (89%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| |||||||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 17273680 AAAAACACAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 17273739 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| |||| |||||||||| ||||| Sbjct 17273740 GCTCTAACCAGCTGAGCTAATAGGCCG 17273766 Score = 104 bits (114), Expect = 1e-17 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 11445 AAAAATCAAATT-GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| ||||| |||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 14840385 AAAAAGAAAATTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 14840444 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||| |||||||||| |||| Sbjct 14840445 GCTCTAACCAGCTGAGCTAATAGGCC 14840470 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 7655085 AAAGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 7655026 Query 11512 CAACTGAGCTAATGGGCC 11529 || |||||||||| |||| Sbjct 7655025 CAGCTGAGCTAATAGGCC 7655008 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 || |||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 15910593 AAGTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 15910534 Query 11512 CAACTGAGCTAATGGGCC 11529 || |||||||||| |||| Sbjct 15910533 CAGCTGAGCTAATAGGCC 15910516 >seq3 Length=27368013 Score = 109 bits (120), Expect = 3e-19 Identities = 80/94 (85%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||| | || |||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 23973158 AACAAAACAAAAAGTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 23973099 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 |||||||| |||| |||||||||| |||||| || Sbjct 23973098 GACGCTCTAACCAGCTGAGCTAATAGGCCGTTGA 23973065 >seq8 Length=22573980 Score = 107 bits (118), Expect = 1e-18 Identities = 78/91 (86%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 |||| | |||| | | ||||||||| | | |||||||| ||||||||||||||||||| Sbjct 7067759 TTAACACAAAACAATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGC 7067818 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| ||||||||||||||| |||| Sbjct 7067819 ACGACGCTCTAACCAACTGAGCTAATAGGCC 7067849 Score = 107 bits (118), Expect = 1e-18 Identities = 76/88 (86%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| | ||| ||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 13883066 AAAAGAAGAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 13883125 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||| |||| |||||||||| |||||| Sbjct 13883126 GCTCTAACCAGCTGAGCTAATAGGCCGT 13883153 Score = 102 bits (112), Expect = 4e-17 Identities = 80/96 (83%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAA---ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 |||||| ||||| || | ||||||||| | | |||||||| |||||||||||||| Sbjct 13896003 AATTAACCAAAAAAGAAGAGAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTA 13896062 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||| |||| |||||||||| |||| Sbjct 13896063 TTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC 13896098 Score = 102 bits (112), Expect = 4e-17 Identities = 80/96 (83%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAA---ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 |||||| ||||| || | ||||||||| | | |||||||| |||||||||||||| Sbjct 13906350 AATTAACCAAAAAAGAAGAGAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTA 13906409 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||| |||| |||||||||| |||| Sbjct 13906410 TTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC 13906445 Score = 100 bits (110), Expect = 1e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 14349911 AAGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 14349970 Query 11513 AACTGAGCTAATGGGCC 11529 | |||||||||| |||| Sbjct 14349971 AGCTGAGCTAATAGGCC 14349987 Score = 96.9 bits (106), Expect = 2e-15 Identities = 75/89 (84%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 11443 TAAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||| ||| |||| ||||| ||| | | |||||||| ||||||||||||||||||||| Sbjct 7069766 TAAACAATAAAATAATGGCCTATGTAGGTCTCGAACCTACGACCTTCGCGTTATTAGCAC 7069825 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||| |||||||||| |||| Sbjct 7069826 GACGCTCTAGCCAGCTGAGCTAATAGGCC 7069854 >seq5 Length=18496696 Score = 105 bits (116), Expect = 3e-18 Identities = 77/89 (87%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| || ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 16687172 AATAAAAAAATAA--TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 16687115 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||| |||||||||| |||| Sbjct 16687114 GACGCTCTAACCAGCTGAGCTAATAGGCC 16687086 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 15856849 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 15856790 Query 11512 CAACTGAGCTAATGGGCC 11529 || |||||||||| |||| Sbjct 15856789 CAGCTGAGCTAATAGGCC 15856772 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| | Sbjct 16650968 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 16650909 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 16650908 TGAGCTAATAGGCC 16650895 >seq4 Length=25843236 Score = 102 bits (112), Expect = 4e-17 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| | Sbjct 270750 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 270809 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||| ||||| Sbjct 270810 TGAGCTAATAGGCCG 270824 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 492663 AAAGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 492604 Query 11512 CAACTGAGCTAATGGGCC 11529 || |||||||||| |||| Sbjct 492603 CAGCTGAGCTAATAGGCC 492586 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| | Sbjct 3244883 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 3244824 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 3244823 TGAGCTAATAGGCC 3244810 >seq1 Length=47851208 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| | Sbjct 35185423 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 35185364 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 35185363 TGAGCTAATAGGCC 35185350 >seq6 Length=30767194 Score = 95.1 bits (104), Expect = 6e-15 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||| ||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 5952488 TGGCCTATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 5952547 Query 11516 TGAGCTAATGGGCC 11529 || |||||| |||| Sbjct 5952548 TGCGCTAATAGGCC 5952561 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261490588110592