Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq192 497 2e-135 seq2 407 2e-108 seq6 93.3 7e-14 >seq192 Length=157790 Score = 497 bits (550), Expect = 2e-135 Identities = 678/944 (72%), Gaps = 2/944 (0%) Strand=Plus/Minus Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGCTTTATCG 211669 |||| |||||||||||| | |||||||| | | | | ||||| | ||||| Sbjct 1318 TTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTA 1259 Query 211670 TAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTT 211729 | || ||||| || |||||||| || ||||| || || || |||||||| || |||| | Sbjct 1258 TTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGAT 1199 Query 211730 CATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCG 211789 | || | ||||| ||||| || || |||||||| || |||| | || || || | Sbjct 1198 CTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAG 1139 Query 211790 GTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTG 211849 |||| ||||| || || || |||||||| || | ||||||| ||| | ||||| |||| Sbjct 1138 GTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTG 1079 Query 211850 GTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGAC 211909 ||||||| | | | | | |||||| | | || | | |||||||| | Sbjct 1078 GTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTG 1019 Query 211910 AGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCAC 211969 ||||||||||| | |||| | |||||||| |||||||| |||||| |||||||| | Sbjct 1018 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTC 959 Query 211970 CTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAG 212029 |||| |||| ||| ||||| ||| | | || ||| | ||||| || || || | Sbjct 958 CTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTG 899 Query 212030 ACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAAC 212089 |||||||||| |||| || || || || |||||||||||| | ||||||||||| || | Sbjct 898 ACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGC 839 Query 212090 ATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCAT 212149 | |||||||||||||||||||| || ||| ||| || || ||| | ||||| || | Sbjct 838 ACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCC 779 Query 212150 TATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTT 212209 ||||| ||||||||| || || | || || ||| | ||| | |||||||| | Sbjct 778 TATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAA 719 Query 212210 TAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTG 212269 || || || | ||||||| ||||| ||||| ||||| || ||||| ||||| | Sbjct 718 ATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAG 659 Query 212270 CTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAA 212329 | || ||||| || || || || | |||||||| ||||| |||||||| | Sbjct 658 CCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTT 599 Query 212330 GTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTA 212389 |||||| |||||||| || | |||||||| | || | ||||| ||| || | |||| Sbjct 598 CTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTA 539 Query 212390 TCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCAT 212449 || |||| ||||| |||||| ||||||| || || ||||| ||||| || |||||| | Sbjct 538 TCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGAT-AGT 480 Query 212450 CA-GGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAA 212508 || ||| || || |||||||| |||| || ||||| | || ||||||||||||||| Sbjct 479 CAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAA 420 Query 212509 GTTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 |||||||| ||| | ||||| || || ||||| || || |||| Sbjct 419 GTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATCTAGC 376 >seq2 Length=30405870 Score = 407 bits (450), Expect = 2e-108 Identities = 663/948 (70%), Gaps = 10/948 (1%) Strand=Plus/Plus Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGCT----TT 211665 |||| |||||||||||| | |||||||| | || | | | ||||| | || || Sbjct 16144611 TTGGATGGTTTGGTGTTTTGATGATCCCTACT-TTATTGA--CCACAACTT-CTGTACTT 16144666 Query 211666 ATCGTAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCT 211725 || | | ||||| || |||||||| || ||||| || || || ||| |||| || || Sbjct 16144667 ATTATTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCT 16144726 Query 211726 GGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCA 211785 || || || | ||||| ||||| || || |||||||| || |||| | || || Sbjct 16144727 GGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCT 16144786 Query 211786 ATCGGTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAAT 211845 || ||| | ||||| || || || |||||||| || | ||||||| ||| | ||||| Sbjct 16144787 ATAGGTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAAC 16144846 Query 211846 GGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGA 211905 ||||||||||| | | | | | |||||| | || | | |||||||| Sbjct 16144847 GGTGGTCCTTATGAACTAATTGTTCTACACTTCTCACTTGGTGTAGCTTGCTACATGGGT 16144906 Query 211906 AGACAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCA 211965 | ||||||| || | |||| | |||| ||| |||||||| |||||| |||||| Sbjct 16144907 CGTGAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCA 16144966 Query 211966 GCACCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTC 212025 || ||||| |||| ||| ||||| ||| | | || ||| | ||||| || || Sbjct 16144967 GCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTT 16145026 Query 212026 TCAGACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCA 212085 || |||| ||| | |||| || || || || |||||||||||| | ||||||||||| Sbjct 16145027 TCTGACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCT 16145086 Query 212086 GAACATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGA 212145 | || |||||||||||||||||||| || ||| ||| | || ||| | ||||| || Sbjct 16145087 AAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGC 16145146 Query 212146 GCATTATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACT 212205 | ||||| ||||||||| || || | || || || | ||| | ||||||| Sbjct 16145147 TCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATA 16145206 Query 212206 GGTTTAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATC 212265 || || || | ||||||| ||||| ||||| ||||| || ||||| ||| Sbjct 16145207 AAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATC 16145266 Query 212266 GTTGCTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGC 212325 | || || ||||| || || || || | |||||||| ||||| |||||||| Sbjct 16145267 ATAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCT 16145326 Query 212326 AGAAGTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATG 212385 | |||||| |||||||| || | |||||||| | || | ||||| ||| || | Sbjct 16145327 TGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTA 16145386 Query 212386 GGTATCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGAT 212445 |||||| | || ||||| |||||| ||||||| || || ||||| ||||| || |||||| Sbjct 16145387 GGTATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGAT 16145446 Query 212446 GCATCAGGTAAG-GTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTAT 212504 ||||| | || || |||||||| |||| || ||||| | | ||||||||||| Sbjct 16145447 AG-TCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTAT 16145505 Query 212505 GGAAGTTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 |||||||||||| ||| | ||||| || || ||||| || || |||| Sbjct 16145506 GGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGC 16145553 >seq6 Length=30767194 Score = 93.3 bits (102), Expect = 7e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 212406 CAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAG-GTTGTTC 212464 ||| || ||||| || || ||||| ||||| || |||||| ||||| | || || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAG-TCAGGGTCGTGTAATTA 16007611 Query 212465 CTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAA 212524 |||||||| |||| || ||||| || |||||||||||||| |||||||| ||| | | Sbjct 16007610 ATACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTA 16007551 Query 212525 ATGCACACAACTTCCCACTTGACTTAGCATCTG 212557 |||| || || |||| || || |||| |||| Sbjct 16007550 ATGCTCATAATTTCCATCTAGATGTAGCTTCTG 16007518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807553261867520