Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3 170 2e-37 seq6 113 6e-20 seq8 91.5 2e-13 >seq3 Length=27368013 Score = 170 bits (188), Expect = 2e-37 Identities = 396/588 (67%), Gaps = 8/588 (1%) Strand=Plus/Minus Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355 ||| ||| || ||||| |||||||||| |||||| |||| |||| ||||| || | Sbjct 26803541 ACAGCAAGCACGCGAAGTCGCAGTGCAAACCCTCATCTCGCGAGATTAACTCGTTTGAGA 26803482 Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT-CCA 33414 |||| ||||| ||||||| || ||||| || ||||||||||| | || || | || Sbjct 26803481 ACGTCAGTCCCGGCATTAACCCGCGCTTCTTTAGCCAAAATATCG-CGCAAAAACTGCCC 26803423 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT- 33473 || ||||| || ||||| || ||||||||| | | || | |||| || || || Sbjct 26803422 GAGAAGAATATCCCTTCCACGCAAGCAAAGGCCACGA-TC-CGCTCCGCAAACGATTCTG 26803365 Query 33474 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33532 | | | ||||| | | ||||| | ||||||||| | || || || || || || | Sbjct 26803364 AGCCGTCGATCCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGA 26803305 Query 33533 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33592 |||| | ||| || ||| || || | || || | || || || | | || | Sbjct 26803304 TGGCGTGAAAAAGCCTGTTCTTCTCGTCCGAGTCCTTGATGTAGGTCTCCAGAAGGAGGC 26803245 Query 33593 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 33652 | ||||| || || || ||||| || ||||| ||||| || |||||||| | ||||| Sbjct 26803244 TGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGAGCCT 26803185 Query 33653 CGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAA-ATTTTCATTCACTATTCCGTCA 33711 ||| | ||| ||||| | || | | ||||| ||| ||| || || || |||||| Sbjct 26803184 CGGAGACCTGGACTTC-CTTCATGAACCTTCCGGCAAGATTCTCCAAAACGATGCCGTCA 26803126 Query 33712 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA 33771 ||| || || || || | || || | || || | || ||| | || ||||| | Sbjct 26803125 GAGGCAGCGAAGAAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCAGGGGTTAGAGTT 26803066 Query 33772 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCT 33831 | ||||| | || | | | ||| || || || | ||||| || || ||||| Sbjct 26803065 TCCCAATGGCGTAGGTCCTGGCAGAGATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCG 26803006 Query 33832 GCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATA 33879 ||||| || ||||| | |||||| || |||||||| ||||| ||| Sbjct 26803005 GCCTTCTTGTACATCTCCCAGATTTCCGGGTATTGGATCGGGAACATA 26802958 >seq6 Length=30767194 Score = 113 bits (124), Expect = 6e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 63362 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63421 || |||| ||| || ||||| | || | ||| || | |||| |||||| ||||||||| Sbjct 14680454 CCTTTTGCCTCCCCCTTGATCAACATAACGAGCTGTATCATTAAAAACTCGCAACATTGG 14680513 Query 63422 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATT 63481 || ||| || || ||| | ||||| || || |||||||| || |||||||||| || Sbjct 14680514 AACAATGCCATTGGATGTCCCATTTGTTCCACGAATATAGCTGCCTGTGGCACGAATGTT 14680573 Query 63482 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63541 || || | ||| ||||| || ||| ||| ||| | || ||| || || || Sbjct 14680574 GTGAACAGAGACACCAATTCCTCCAGCCGATTTGCTGATAACAGCACATTCCTTCAAAGT 14680633 Query 63542 GTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63593 ||||| || || || ||||||||||| ||||| || || || |||||| Sbjct 14680634 ATCATAAATGCCTTCAATGCTATCATCTTTCATGCAAACGAGGAAGCAGCTA 14680685 >seq8 Length=22573980 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 |||||| |||| || | ||| |||| ||| || | ||||| | || | | || Sbjct 3580290 AGTTCCTCCATTGAAAAGGGTCGGAGTAGCATGAATGAACCAACGCTGGGACATCAAATG 3580231 Query 63671 GTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTA 63729 ||| || | | ||| || || || || | ||| || || || || | || | ||| | Sbjct 3580230 GTAGGTTTGGAGAGCAGACTCGATGTCATCCTTG-TGTATACCAACAGAAACCCTCATCA 3580172 Query 63730 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63789 |||||||||| || ||||| || ||||| | |||| || || | |||||| | || | Sbjct 3580171 ACATGTGCTGCGGCCTTTCCACAATCTTCTCATTTACCTTTAAAAGGTAGGACCTCTCTA 3580112 Query 63790 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838 ||||||||||||||| |||| || |||||||| ||| ||||| || Sbjct 3580111 GAGTTTTAAAACCAAAGTAGTCATAATCAAAGTCTCTTTCATAAATGAT 3580063 Score = 89.7 bits (98), Expect = 6e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 63147 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63206 ||||||||||||| | || |||||| |||| ||||| | ||| ||||| | || Sbjct 3581169 TCTCCCCAAACATCAGCTAAGCCAGGAGCCTCATTTGGACAAAACAAAGACCATTGCCCA 3581110 Query 63207 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 63266 ||| | | |||| || ||| ||||||||||||||||| ||||| ||||||||||| Sbjct 3581109 TCACCTTGGACTCTTTCCATGAAGAGATCAGGAATCCAGAGAGCATAAAATAGATCTCGA 3581050 Query 63267 GTTCTATGTTCCTC 63280 | | |||||| || Sbjct 3581049 GCCCGATGTTCTTC 3581036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945704926720