Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3 158 2e-33 seq6 131 2e-25 seq8 95.1 2e-14 >seq3 Length=27368013 Score = 158 bits (174), Expect = 2e-33 Identities = 391/587 (67%), Gaps = 6/587 (1%) Strand=Plus/Minus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| ||| || ||||| |||||||| | |||||| |||| ||||| ||||| || | Sbjct 26803541 ACAGCAAGCACGCGAAGTCGCAGTGCAAACCCTCATCTCGCGAGATTAACTCGTTTGAGA 26803482 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCA 32771 |||| ||||| ||||||| || ||||| || ||||||||||| | |||||| | || Sbjct 26803481 ACGTCAGTCCCGGCATTAACCCGCGCTTCTTTAGCCAAAATATCG-CGCAAAAACTGCCC 26803423 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT- 32830 || ||||| || ||||| || |||||||| | | || | |||| || || || Sbjct 26803422 GAGAAGAATATCCCTTCCACGCAAGCAAAGGCCACGA-TC-CGCTCCGCAAACGATTCTG 26803365 Query 32831 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 32889 | | | ||||| | | ||||| | ||||||||| | || || || || || || | Sbjct 26803364 AGCCGTCGATCCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGA 26803305 Query 32890 TAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGAC 32949 | || | ||| || ||| || || | || || | || || || | | || | Sbjct 26803304 TGGCGTGAAAAAGCCTGTTCTTCTCGTCCGAGTCCTTGATGTAGGTCTCCAGAAGGAGGC 26803245 Query 32950 TATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCT 33009 | ||||| || || || ||||| || ||||| || || || ||||||||| | ||||| Sbjct 26803244 TGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGAGCCT 26803185 Query 33010 CGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 33069 ||| | ||| ||||| | || | | | || | ||| || || || |||||| Sbjct 26803184 CGGAGACCTGGACTTCCTTCATGAACCTTCCGGCAAGATTCTCCAAAACGATGCCGTCAG 26803125 Query 33070 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTAT 33129 ||| || || || || | || || | || || | || ||| | || ||||| | | Sbjct 26803124 AGGCAGCGAAGAAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCAGGGGTTAGAGTTT 26803065 Query 33130 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 33189 ||||| | || | | | ||| || || || | ||||| || || ||||| | Sbjct 26803064 CCCAATGGCGTAGGTCCTGGCAGAGATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGG 26803005 Query 33190 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 33236 |||| || ||||| | |||||| || | ||||| || || || ||| Sbjct 26803004 CCTTCTTGTACATCTCCCAGATTTCCGGGTATTGGATCGGGAACATA 26802958 >seq6 Length=30767194 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 63217 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63276 || |||| ||| || ||||| | || | ||| || | |||| |||||| ||||||||| Sbjct 14680454 CCTTTTGCCTCCCCCTTGATCAACATAACGAGCTGTATCATTAAAAACTCGCAACATTGG 14680513 Query 63277 AATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT 63336 || ||| ||||||||||| ||||| || || |||||||| || |||||||||| || Sbjct 14680514 AACAATGCCATTGGATGTCCCATTTGTTCCACGAATATAGCTGCCTGTGGCACGAATGTT 14680573 Query 63337 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63396 || || | ||| ||||| || ||| ||| ||| | || ||| || || || Sbjct 14680574 GTGAACAGAGACACCAATTCCTCCAGCCGATTTGCTGATAACAGCACATTCCTTCAAAGT 14680633 Query 63397 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 63448 |||||| ||||| || || |||||||| ||||| || || || |||||| Sbjct 14680634 ATCATAAATGCCTTCAATGCTATCATCTTTCATGCAAACGAGGAAGCAGCTA 14680685 >seq8 Length=22573980 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 |||||| |||| || | ||| |||| ||| ||| | ||||| | || | | || Sbjct 3580290 AGTTCCTCCATTGAAAAGGGTCGGAGTAGCATGAATGAACCAACGCTGGGACATCAAATG 3580231 Query 63526 GTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTA 63584 ||| || | | ||| || || || || | ||| || || || || | || | ||| | Sbjct 3580230 GTAGGTTTGGAGAGCAGACTCGATGTCATCCTTG-TGTATACCAACAGAAACCCTCATCA 3580172 Query 63585 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644 |||||||||| || ||||| || ||||| | |||| || || | |||||| | || | Sbjct 3580171 ACATGTGCTGCGGCCTTTCCACAATCTTCTCATTTACCTTTAAAAGGTAGGACCTCTCTA 3580112 Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693 ||||||||||||||| |||| || |||||||| ||| ||||| || Sbjct 3580111 GAGTTTTAAAACCAAAGTAGTCATAATCAAAGTCTCTTTCATAAATGAT 3580063 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 63002 TCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63061 ||||||||||||| | | |||||| |||| ||||| | ||| ||||| | || Sbjct 3581169 TCTCCCCAAACATCAGCTAAGCCAGGAGCCTCATTTGGACAAAACAAAGACCATTGCCCA 3581110 Query 63062 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 63121 ||| | | |||| || ||| ||||||||||||||||| ||||| ||||||||||| Sbjct 3581109 TCACCTTGGACTCTTTCCATGAAGAGATCAGGAATCCAGAGAGCATAAAATAGATCTCGA 3581050 Query 63122 GTTCTATGTTCCTC 63135 | | |||||| || Sbjct 3581049 GCCCGATGTTCTTC 3581036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630479283200