Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 152 6e-32 seq1 93.3 5e-14 seq8 91.5 2e-13 seq7 87.8 2e-12 seq5 87.8 2e-12 seq2 86.0 7e-12 seq4 82.4 9e-11 >seq3 Length=27368013 Score = 152 bits (168), Expect = 6e-32 Identities = 389/589 (66%), Gaps = 5/589 (1%) Strand=Plus/Minus Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 ||||| |||||||| |||||| || ||||| || ||||| || || ||||| || Sbjct 26803543 GTACAGCAAGCACGCGAAGTCGCAGTGCAAACCCTCATCTCGCGAGATTAACTCGTTTGA 26803484 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 ||| || | || || | | || || ||||| ||||||||||| | |||||| || Sbjct 26803483 GAACGTCAGTCCCGGCATTAACCCGCGCTTCTTTAGCCAAAATATCGCGCAAAAACTGCC 26803424 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 || || ||||| ||||||||| ||||| ||||| || || || ||||| | | || Sbjct 26803423 CGAGAAGAATATCCCTTCCACGCAAGCAAAGGCCACGATCCGCTCCGCAAACGATTCTGA 26803364 Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321 | | |||||| || ||||| | ||| || ||| | | || || | || || Sbjct 26803363 ---GCCGTCGATCCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATC 26803307 Query 93322 GATAGCGTTAAATAG-GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACA 93380 ||| |||| ||| || | ||| ||||||||| || ||||| || || | | | Sbjct 26803306 GATGGCGTGAAAAAGCCTGTTCT-TCTCGTCCGAGTCCTTGATGTAGGTCTCCAGAAGGA 26803248 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 | ||||| || || |||| ||||| || || || ||||| |||||||| | || Sbjct 26803247 GGCTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGAG 26803188 Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500 | || | || ||| ||||| | || || | | ||||| || || || || | Sbjct 26803187 CCTCGGAGACCTGGACTTCCTTCATGAACCTTCCGGCAAGATTCTCCAAAACGATGCCGT 26803128 Query 93501 CGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCT 93560 | || || || || || || | | || | || || || ||||| || | || Sbjct 26803127 CAGAGGCAGCGAAGAAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCAGGGGTTAGAG 26803068 Query 93561 TATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTT 93620 | ||||||| | ||| || | | ||||| || || ||| | ||||| || || || | Sbjct 26803067 TTTCCCAATGGCGTAGGTCCTGGCAGAGATCAACCTCCTCGGCGGTCCAGAAGGAGGCCT 26803008 Query 93621 CTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669 | || || |||||||| ||||| || || | ||||| || || || || Sbjct 26803007 CGGCCTTCTTGTACATCTCCCAGATTTCCGGGTATTGGATCGGGAACAT 26802959 >seq1 Length=47851208 Score = 93.3 bits (102), Expect = 5e-14 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGG 126319 || ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | Sbjct 34965053 TATAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAG 34965112 Query 126320 AGCGTGGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||||||| || ||||| ||||||| || || Sbjct 34965113 GGCGTGGGTTCAAATCCCACTTCTGACAATTTCTT 34965147 Score = 91.5 bits (100), Expect = 2e-13 Identities = 84/104 (81%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||| | || || | ||| Sbjct 41927235 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCG 41927176 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTAT-TATTGGAATTTTT 126366 ||||||| || ||||| ||||||| | || |||| | ||||| Sbjct 41927175 TGGGTTCAAATCCCACTTCTGACAATTCATGTATTCTATTTTTT 41927132 Score = 89.7 bits (98), Expect = 6e-13 Identities = 83/104 (80%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 44268296 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGC 44268237 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 |||||||| || ||||| |||||| | ||| | | |||||| Sbjct 44268236 GTGGGTTCAAATCCCACTTCTGACA---TTTTACTTGTATTTTT 44268196 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/94 (81%), Gaps = 6/94 (6%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 33469674 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAGG 33469731 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||||||| || ||||| |||||| ||| || Sbjct 33469732 GCGTGGGTTCAAATCCCACTTCTGACATATTTTT 33469765 >seq8 Length=22573980 Score = 91.5 bits (100), Expect = 2e-13 Identities = 73/87 (84%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGA 126320 ||||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | Sbjct 8426957 ACAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGG 8426898 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 8426897 GCGTGGGTTCAAATCCCACTTCTGACA 8426871 >seq7 Length=22388614 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 13224482 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 13224539 Query 126328 TTCGAACCCCACACCTGACAAATTA 126352 ||| || |||||| ||| ||||||| Sbjct 13224540 TTCAAATCCCACAGCTGTCAAATTA 13224564 >seq5 Length=18496696 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||| | || || | || Sbjct 11489827 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGC 11489768 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 |||||||| || ||||| |||||| Sbjct 11489767 GTGGGTTCAAATCCCACTTCTGACA 11489743 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 14864979 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 14864922 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTT 126369 ||| || |||||| ||| | ||| || |||| ||||| || Sbjct 14864921 TTCAAATCCCACAGCTGTC--ATTCTTTTTGGTGTTTTTTTT 14864882 >seq2 Length=30405870 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCT--CGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||| | || || | ||| Sbjct 28818316 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCG 28818257 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || ||||| |||||| Sbjct 28818256 TGGGTTCAAATCCCACTTCTGACA 28818233 Score = 82.4 bits (90), Expect = 9e-11 Identities = 77/96 (80%), Gaps = 8/96 (8%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC----GGGAG 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| |||| | | | Sbjct 22302437 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGAAAGAGGG 22302494 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||| || ||||| ||||| |||| |||| Sbjct 22302495 CGTGGGTTCAAATCCCACTTCTGAC--ATTACTATT 22302528 Score = 82.4 bits (90), Expect = 9e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 29686574 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 29686517 Query 126325 GGGTTCGAACCCCACACCTGACAA 126348 |||||| || |||||| ||| ||| Sbjct 29686516 GGGTTCAAATCCCACAGCTGTCAA 29686493 Score = 82.4 bits (90), Expect = 9e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 29686745 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 29686688 Query 126325 GGGTTCGAACCCCACACCTGACAA 126348 |||||| || |||||| ||| ||| Sbjct 29686687 GGGTTCAAATCCCACAGCTGTCAA 29686664 >seq4 Length=25843236 Score = 82.4 bits (90), Expect = 9e-11 Identities = 78/98 (80%), Gaps = 4/98 (4%) Strand=Plus/Plus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCTCGGGAG 126321 |||||||| ||||||||||||||||||||||||| | ||| ||||| ||| | | | Sbjct 3819787 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGAAAGAGGG 3819846 Query 126322 CGTGGGTTCGAACCCCACACCTGACA--AATTATTATT 126357 ||||||||| || ||||| |||||| |||| || || Sbjct 3819847 CGTGGGTTCAAATCCCACTTCTGACATCAATTTTTTTT 3819884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859463534080