Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq4 104 2e-17 seq6 89.7 4e-13 seq2 87.8 2e-12 seq1 87.8 2e-12 >seq4 Length=25843236 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || || || || || |||||||||||| Sbjct 12707222 ATACCACCACGGAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCG 12707163 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| ||||| || || ||||| |||| || | ||| ||||| || Sbjct 12707162 GCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGG 12707103 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| ||| | | |||| |||||| | | ||| Sbjct 12707102 GGAATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCAATGGTGTCAGAGCTTTCA 12707043 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || ||||| || ||||||||||| Sbjct 12707042 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTTTTCACGAAAATCTGCAT 12706993 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || || || || || |||||||||||| Sbjct 12721207 ATACCACCACGGAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCG 12721148 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| ||||| || || ||||| |||| || | ||| ||||| || Sbjct 12721147 GCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGG 12721088 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| ||| | | |||| |||||| | | ||| Sbjct 12721087 GGAATGCCTTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATGGTGTCAGAGCTTTCA 12721028 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || ||||| || || |||||||| Sbjct 12721027 ACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 12720978 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||||||||| || | | || | || | ||||| || || |||||||||||||| Sbjct 12760605 ACCGCCACGGAGACGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCTGC 12760664 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| | || || || || ||||| || ||||||| | ||| ||||||||||| Sbjct 12760665 AAGAGTCCTCCCGTCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGAGG 12760724 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 |||||| || ||||| |||||| ||| | | |||| ||| || | || || Sbjct 12760725 AATGCCCTCCTTGTCTTGAATCTTGGCTTTCACATTATCAATGGTATCAGAACTCTCCAC 12760784 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | ||| || || |||||||| || ||||| |||||||| Sbjct 12760785 CTCCAAAGTTATCGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCAT 12760832 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| ||||| ||||| |||||| | || || ||| |||||||| |||||| Sbjct 12761092 GTTGATTCCTTTTGGATGTTATAATCGGCAAGGGTGCGGCCATCCTCAAGTTGCTTACCA 12761151 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || | ||| || || || ||||||||||| || || ||| ||| ||| Sbjct 12761152 GCGAAGATTAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTATCCTGAATTTTTGCCTTT 12761211 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||| || | | ||| || |||| ||| | ||| || || || || || Sbjct 12761212 ACATTATCTATGGTATCCGAGCTTTCAACCTCCAAGGTTATCGTCTTCCCAGTTAGTGTC 12761271 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| || ||||| Sbjct 12761272 TTGACAAAGATTTGCAT 12761288 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||| | || ||||||||||| ||||| || || Sbjct 12721663 ATACCACCACGCAGCCGGAGCACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCA 12721604 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| ||||| || ||||| || ||||||| | ||| ||||| || Sbjct 12721603 GCAAGGGTGCGTCCATCCTCAAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGG 12721544 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | |||| ||| || | | ||| Sbjct 12721543 GGAATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTATCCGAGCTTTCA 12721484 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || || || || || || ||||| || ||||| Sbjct 12721483 ACTTCCAAGGTGATTGTCTTCCCAGTAAGGGTCTTAACAAAGATTTGCAT 12721434 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||| | || || || || || |||||||| || Sbjct 1215036 ATACCACCACGCAGACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCT 1215095 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| || || || || || || ||| ||||||||||||| ||||| ||| Sbjct 1215096 GCGAGGGTACGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGA 1215155 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | |||||| | || || Sbjct 1215156 GGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGATGACTCC 1215215 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || |||||||| || ||||| || || || ||||| Sbjct 1215216 ACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGAAGATTTGCAT 1215265 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || |||||||||||||| | ||| | ||| || || || ||||| Sbjct 12722314 GTAGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCGAGCTGCTTACCG 12722255 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||| ||||| ||||||||||| || ||||| |||||| || Sbjct 12722254 GCAAAGATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTC 12722195 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | || || |||| || | || ||||| |||||||| Sbjct 12722194 ACATTATCAATTGTATCCGAACTCTCCACCTCCAACGTTATGGTCTTGCCAGTCAGAGTC 12722135 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 12722134 TTCACAAAGATCTGCAT 12722118 >seq6 Length=30767194 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/234 (69%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 114151 AAAT-ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAA 114209 |||| ||| ||||| || | | || | ||| | ||||| ||||| || || || ||| Sbjct 23849110 AAATCACCACCACGCAGACGAAGGACAAGATGGAGAGTAGACTCTTTCTGGATATTATAA 23849051 Query 114210 TCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCC 114269 || | |||||| ||| ||||| ||||| || || |||| | | ||| |||||| Sbjct 23849050 TCTGCAAGGGTACGACCATCCTCAAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCC 23848991 Query 114270 GGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGAT 114329 || || || || || ||||| |||||| ||| | | |||| ||||| | | Sbjct 23848990 GGTGGGATCCCCTCCTTGTCTTGAATCTTAGCTTTGACATTGTCAATAGTGTCAGAGCTC 23848931 Query 114330 TCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || |||| || | || || || ||||| || || ||||||||||||||| Sbjct 23848930 TCAACCTCCAGAGTAATGGTCTTCCCAGTCAGGGTCTTCACAAAAATCTGCATG 23848877 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || | || ||| || || | || || || ||||| ||||||||||| Sbjct 23848651 ATACCACCTCTCAGACGCAGAACCAAGTGCAAAGTTGACTCCTTTTGGATGTTGTAATCC 23848592 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | | || || | ||| ||||| ||| |||| || | ||| || || || Sbjct 23848591 GCAAGGGTTCTACCGTCCTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGG 23848532 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| ||| |||| | ||| Sbjct 23848531 GGGATACCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCAATGGTATCGGAGCTCTCG 23848472 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| ||||| || ||||| || ||||||||||| Sbjct 23848471 ACCTCCAGAGTAATTGTTTTCCCGGTTAGGGTTTTGACGAAAATCTGCAT 23848422 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || || | || | ||| | || || ||||| || ||||||||||| Sbjct 23848879 ATGCCACCACGAAGCCTGAGCACCAGATGAAGAGTCGACTCTTTCTGGATGTTGTAATCC 23848820 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | ||| || | ||| || ||||| |||| || | ||| || || ||| Sbjct 23848819 GCCAGAGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGA 23848760 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| || | | |||| || || | | ||| Sbjct 23848759 GGAATGCCTTCCTTGTCCTGAATCTTCGCCTTCACATTGTCAATCGTATCAGAGCTCTCG 23848700 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || || || || || || || |||||||| Sbjct 23848699 ACCTCCAAAGTTATTGTCTTCCCTGTAAGGGTCTTCACGAATATCTGCAT 23848650 >seq2 Length=30405870 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | |||| || | ||||| ||||| || ||||| ||||| Sbjct 22653232 ACCCCCACGAAGACGAAGTACTAGGTGCAGGGTAGACTCTTTCTGGATGTTATAATCAGC 22653291 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||||| || |||||||| || ||||| | ||||| | ||| || |||||||| Sbjct 22653292 CAGGGTACGTCCGTCCTCAAGTTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCCGGAGG 22653351 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || || |||||||| || || ||| | | |||| || |||| || || Sbjct 22653352 GATACCCTCTTTGTCTTGGATTTTAGCTTTCACATTGTCAATTGTATCGGAACCCTCAAC 22653411 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || |||||||||| |||||||||||||| Sbjct 22653412 ATCAAGAGTGATTGTCTTCCCCGTCAGAGTTTCAACAAAAATCTGCAT 22653459 >seq1 Length=47851208 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || |||||||||||| | || || || || || || || || Sbjct 26252850 GTCGATTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTGCCG 26252909 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| ||||| || |||||||| || ||||| ||||| || Sbjct 26252910 GCGAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTC 26252969 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||| || | ||| ||||| || | ||| | || || || || || ||| Sbjct 26252970 ACATTGTCGATGGTATCAGAGGACTCGACCTCTAGGGTAATGGTCTTACCCGTTAGGGTT 26253029 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 26253030 TTCACGAAGATCTGCATG 26253047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133416885504