Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 282 8e-71 >seq3 Length=27368013 Score = 282 bits (312), Expect = 8e-71 Identities = 593/869 (68%), Gaps = 20/869 (2%) Strand=Plus/Plus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| | ||| ||| |||||| |||||||||||||| || |||| ||||||||| Sbjct 26802967 GATCCAATACCCGGAAATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGC 26803026 Query 42344 CGAGGAGATTGACCTGGCCAAGGAC--ACGGCCGGCTGGGAGTCACTGTCTGAGAACGAA 42401 ||||||| |||| || | ||||| ||| | ||||| | || | ||| Sbjct 26803027 CGAGGAGGTTGATCTCTGCCAGGACCTACGCCAT--TGGGAAACTCTAACCCCTGGCGAG 26803084 Query 42402 AAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAG 42461 ||| ||| ||| || | || ||||||||||| |||||||||||||| || ||| Sbjct 26803085 AAGCACTTCATCACCCACGTGCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTTTTGGAG 26803144 Query 42462 AACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGC 42521 || || ||| ||||||||||| || || ||| || ||||| ||| |||||||||| Sbjct 26803145 AATCTTGCCGGAAGGTTCATGAAGGAAGTCCAGGTCTCCGAGGCTCGCGCCTTCTACGGC 26803204 Query 42522 TTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTAC 42581 |||||||| ||||| |||||| | ||||| ||| ||||| | || || | || ||| Sbjct 26803205 TTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTGGAGACCTAC 26803264 Query 42582 ATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATC 42641 ||| ||| | | |||| ||| |||| || | ||||| || || || |||||| || Sbjct 26803265 ATCAAGGACTCGGACGAGAAGAACAGGCTTTTTCACGCCATCGATACCATTCCCTGCGTC 26803324 Query 42642 AAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAG 42701 | ||||||||| | ||||| || ||||||||| | | || | |||| | ||| Sbjct 26803325 ACGAAGAAGGCCCAGTGGGCCCTACGCTGGATCGACGGCTCAGA---ATCGTTTGCGGAG 26803381 Query 42702 AGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATC 42761 || | || |||||| | ||| || || || |||||||||||| || | | || Sbjct 26803382 CGGATCGTGGCCTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGCAGTTTTTGCGCGATA 26803441 Query 42762 TTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGC 42821 || ||||| ||| || | || ||||| ||||| || ||||| ||||| | ||| Sbjct 26803442 TTTTGGCTAAAGAAGCGCGGGTTAATGCCGGGACTGACGTTCTCAAACGAGTTAATCTCG 26803501 Query 42822 AGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCAC 42881 | || ||||| |||| | ||||| || ||| | |||| |||| | || ||| | Sbjct 26803502 CGAGATGAGGGTTTGCACTGCGACTTCGCGTGCTTGCTGTACTCG---CTGCTGAGGAAG 26803558 Query 42882 AAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACG-GAGGCCGTGGAGATCGAGAAGGA 42940 |||| |||| || || | | ||||| ||| | || |||||||| |||| || Sbjct 26803559 AAGCTGAGCGAGGATCGAGTGAAGTCGATCAT-ACGAAACGCGGTGGAGATAGAGAGAGA 26803617 Query 42941 GTTCCT-CACGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGC 42998 |||| | || || || ||||| |||| || || |||||| ||| || ||| || Sbjct 26803618 GTTCGTGTGCGAAG--CCTTACCGTGCGCCCTAGTGGGGATGAACGGCGATCTGATGAGC 26803675 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAG-ATGGGT-CTCAGCCGCCTCT 43056 |||||||| ||| ||| || || || ||| | || ||||| ||| | | | | Sbjct 26803676 CAGTACATCGAGTTCGTGGCGGATAGGCTGCTGGGTGAGCTTGGGTACTC-GAAG-ATTT 26803733 Query 43057 ACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACT 43116 |||| || | ||| ||||| | |||||| ||| || |||| |||||||| | Sbjct 26803734 ACAATGTGCAGAACCCGTTCGATTGGATGGAGCTGATCAGCCTGCAGGGGAAGACCAATT 26803793 Query 43117 TTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 | ||||||||| | || | || |||||| Sbjct 26803794 TCTTCGAGAAGAGGGTTGGGGAGTACCAG 26803822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336933585920