Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq192 655 0.0 seq2 560 1e-154 seq6 93.3 5e-14 seq1 93.3 5e-14 >seq192 Length=157790 Score = 655 bits (726), Expect = 0.0 Identities = 746/995 (75%), Gaps = 6/995 (1%) Strand=Plus/Plus Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588 ||| ||||||| || || |||||||| || || |||||||| || ||||| |||||||| Sbjct 367 TCAACAGCAGCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATA 426 Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCA 7648 ||||| ||| ||||| | | || ||||| || || | |||||||| |||| |||| Sbjct 427 CCAAGGTTAGCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 486 Query 7649 ATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGA 7708 | | || || ||||| || ||||| || | |||||| ||||| ||||| | ||| | | Sbjct 487 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAA 546 Query 7709 GCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAG 7768 || || |||||||| || || || ||||| || || |||||||| || | ||||| || Sbjct 547 GCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 606 Query 7769 TTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATG 7828 |||||||| ||| ||||||||||||| || ||||| || || ||||| || ||||| Sbjct 607 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 666 Query 7829 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTG 7888 || ||||| ||||| ||||||||||| | ||||| | || || ||| || ||| Sbjct 667 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 726 Query 7889 GTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCA 7948 ||||| | | || | ||||||||| | || |||||||| |||||||| || || || Sbjct 727 GTTTCCCTGATCAAACTAGAGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGCCG 786 Query 7949 CCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCT 8008 || || |||||||| ||||| | |||||| || |||||||| |||||||||||||| ||| Sbjct 787 CCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCGGCT 846 Query 8009 TGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAA 8068 ||||| |||| |||| ||||||| ||||| ||||| || || |||||| ||||||| || Sbjct 847 TGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAAAAG 906 Query 8069 GAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAG 8128 |||||||| | ||||| | | ||| ||||||| || || ||||| ||||| || Sbjct 907 CTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 966 Query 8129 TATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCC 8188 ||||| ||| ||||| || |||||||| |||||| || ||||||||||||||||||| Sbjct 967 TATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 1026 Query 8189 ATGTATGCATAG--ATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGT 8246 ||||| ||| || | ||| | | |||||| | | || |||| |||||||||||| Sbjct 1027 ATGTA-GCA-AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGT 1084 Query 8247 TGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAG 8306 |||| | ||| ||||||| ||||| |||||||| || || || ||||| | ||| |||| Sbjct 1085 TGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATAG 1144 Query 8307 CGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAG 8366 | ||| | ||||| || |||||||| || || ||||| ||||| | | || |||| Sbjct 1145 CTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAG 1204 Query 8367 CGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGA 8426 || |||||||| || || ||||| || || ||||| ||||| | |||||| | || | Sbjct 1205 AAACAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATAA 1264 Query 8427 A-ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATAC 8485 | ||| | || || | | | ||||| ||||||| ||||| ||||| || | || Sbjct 1265 ATACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAA 1323 Query 8486 AGACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 ||||| || | ||| ||||| ||||||||| || Sbjct 1324 AGACGGTTTTCAGTGCTGGTTATCCAGTTACAAAA 1358 Score = 533 bits (590), Expect = 2e-146 Identities = 728/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | || | || || ||||| |||| || ||||||||| || ||||| Sbjct 35245 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 35186 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| ||||| | |||||| || || || || || ||||| ||||| ||| Sbjct 35185 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAAAGTC 35126 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || ||||| |||||||| || | ||| Sbjct 35125 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCACGTAGG 35066 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 ||||| || ||||| | | |||| | |||| | ||| | || || ||||| Sbjct 35065 TTAAGGGCCAGACCGACTACTCCAAGAGCACTCATCCACAAACCGGTTACTGGTACAAAT 35006 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 | |||||||||||||| |||||| |||||| || || | |||||||| || ||||| Sbjct 35005 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGACCAA 34946 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622 || || ||||| |||||||| ||||| || || || |||| || || | ||| || | Sbjct 34945 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGG 34886 Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 || ||||||| |||||||||||||| |||||||| ||||| |||||||| |||||| Sbjct 34885 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACGGTAGCACCATGAATA 34826 Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742 || || | || || | || || | || || || |||||||||||||| ||||| | Sbjct 34825 GCGCATAACAGAGCAGCGCCCAACACCCCAGCAACTCCCATCATATGAAATGGGTTCAAT 34766 Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802 ||||| || || || || || | ||||| | ||| || ||||| ||||| |||||||| Sbjct 34765 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCTGCTACACCAAAA 34706 Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862 |||||||| ||||||| ||||| || || ||||| || || || ||||| ||||| Sbjct 34705 CTGGGCGCAAAAAACCAACCAGACTGACCTAGCGGATAAATTAGGAATACAGAAACAAAA 34646 Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921 |||||||| ||||| || || ||||||||||| || || || | | || ||| || || Sbjct 34645 ACAGCAATTGGACCGGAGAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGATCGAGC 34587 Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981 | ||||| || || | ||| |||||||| || | || || ||||| || || ||||| Sbjct 34586 AAGTTCAAATTGACGTAACATAAAACCTATTAGTCCGAAAGCGCCGTGTAGAGCAACAAA 34527 Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041 || ||| || || || | ||| ||| || |||||||| || ||||| |||||||| Sbjct 34526 AGTCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCA 34467 Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101 ||| | | | || || | | | | ||| ||||| || || || || || | ||| Sbjct 34466 TAGTAACAACAAAGAGTGCGCTAAACTATTAGCCGGAGTGGAAACTGCGGCGGTTAAGAA 34407 Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161 ||||| || || | ||| ||| || | || || || ||||| || || || || Sbjct 34406 GTTACAGCCTTCCAAATAGGAACTTGCTAATCCATGGGTATACCATGAAGTTACAAAGGT 34347 Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221 ||| || |||| |||||| || | || | || ||| ||| || || | || || || Sbjct 34346 TGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGGCCAGA 34287 Query 7222 CCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275 |||||| ||||||||||| | || | | | ||||||||| | | |||||| Sbjct 34286 CCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 34233 >seq2 Length=30405870 Score = 560 bits (620), Expect = 1e-154 Identities = 725/995 (73%), Gaps = 6/995 (1%) Strand=Plus/Minus Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588 ||| ||||||| || || |||||||| || ||||||||||| || ||||| |||||||| Sbjct 16145562 TCAACAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 16145503 Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCA 7648 ||||| | | ||||| | | || ||||| || || | |||||||| |||| |||| Sbjct 16145502 CCAAGGTTAACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 16145443 Query 7649 ATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGA 7708 | | || || ||||| || ||||| || | |||||| ||||| || || | ||| | | Sbjct 16145442 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTAAA 16145383 Query 7709 GCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAG 7768 | || |||||||| || || || ||||| || || |||||||| || | |||| || Sbjct 16145382 GTGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAGAA 16145323 Query 7769 TTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATG 7828 |||||||| ||| ||||||||||||| || ||||| || || ||||| || | ||| Sbjct 16145322 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGATA 16145263 Query 7829 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTG 7888 || ||||| ||||| ||||||||||| | ||||| | || || ||| | || Sbjct 16145262 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATG 16145203 Query 7889 GTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCA 7948 ||||| | | || | || |||||| | || |||||||| |||||||| || || || Sbjct 16145202 GTTTCCCTGATCAAACTAGGGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGCCG 16145143 Query 7949 CCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCT 8008 || || ||||| || |||| | |||||| || |||||||| ||||||||||||| ||| Sbjct 16145142 CCGAATACACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAGCT 16145083 Query 8009 TGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAA 8068 ||||| |||| |||| ||||||| ||||| ||||| || || | ||| ||||||| || Sbjct 16145082 TGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAAAAG 16145023 Query 8069 GAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAG 8128 |||||||| | ||||| | | ||| ||||||| || || ||||| ||||| || Sbjct 16145022 CTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 16144963 Query 8129 TATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCC 8188 ||||| ||| ||||| || ||| |||| |||||| || || ||||||||||||||| Sbjct 16144962 TATGCAACAGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACGACCC 16144903 Query 8189 ATGTATGCATAG--ATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGT 8246 ||||| ||| || | ||| | |||||| | | || |||| |||||||||||| Sbjct 16144902 ATGTA-GCA-AGCTACACCAAGTGAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGT 16144845 Query 8247 TGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAG 8306 |||| | ||| ||||||| ||||| |||||||| || || || ||||| | ||| |||| Sbjct 16144844 TGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCTATAG 16144785 Query 8307 CGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAG 8366 | ||| | ||||| || |||||||| || || ||||| ||||| | | || |||| Sbjct 16144784 CTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAG 16144725 Query 8367 CGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGA 8426 || |||| ||| || || ||||| || || ||||| ||||| | ||||| | || | Sbjct 16144724 AAACAGGTTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATAATAA 16144665 Query 8427 -AACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATAC 8485 ||| | || | | | | ||||| ||||||| ||||| ||||| || | || Sbjct 16144664 GTACAGA-AGTTGTGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAA 16144606 Query 8486 AGACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 |||| || | ||| ||||| ||||||||| || Sbjct 16144605 AGACAGTTTTCAGTGCTGGTTATCCAGTTACAAAA 16144571 >seq6 Length=30767194 Score = 93.3 bits (102), Expect = 5e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588 ||| ||| ||| | || ||| |||| || ||||||||||| || ||||| || ||||| Sbjct 16007514 TCAACAGAAGCTACATCTAGATGGAAATTATGAGCATTACGTTCATGCATAACGTCCATA 16007573 Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCA 7648 ||||| ||| |||| | | || ||||| || || | |||||||| |||| |||| Sbjct 16007574 CCAAGGTTAGCGTGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 16007633 Query 7649 ATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTG 7684 | | || || ||||| || ||||| ||||| ||| Sbjct 16007634 ACTACAGATTGATTGAAATTAAAACCATTGAGTTTG 16007669 >seq1 Length=47851208 Score = 93.3 bits (102), Expect = 5e-14 Identities = 164/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 10210 AGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACACAGGTC 10269 || || || ||||||| |||||| |||| ||| | ||||||| ||||| || Sbjct 46743648 AGCTCCTCTTCTTTGTGGGTCTCAAGCACAACATCAGATGAAGGATAAGCCACACAAGTA 46743589 Query 10270 AGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTGATCTACC 10329 || | || ||| |||| ||||| |||||||||||||| ||||| || ||||| Sbjct 46743588 AGGACAAATCCACCATCAATCTGTTCATCATCAAGGAAGCTCTGATCTGACTGGTCTACA 46743529 Query 10330 GTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAGTAGTTG 10389 || | | |||||| ||||| || || | |||||| | ||| |||||| Sbjct 46743528 CCCCCTTCCACAACTTTGCCAGCACATGAAGAGCAAGAACCAGCCCTGCAAGAGTAGGGT 46743469 Query 10390 AGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGATCGTCAGCACACTCAAA 10448 ||||| || || || || || ||||| || |||||||| ||| || | |||||||| Sbjct 46743468 AGGTCGATACCGGCCTCCTCCGCAGCGTCAAGAATGTAAACATCATCCGGGCACTCAAA 46743410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622123306900480