Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 190 3e-43 >seq3 Length=27368013 Score = 190 bits (210), Expect = 3e-43 Identities = 553/839 (66%), Gaps = 23/839 (3%) Strand=Plus/Minus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||||||||| || |||||||| |||| || | || ||||| | |||| |||| Sbjct 26803805 TCTTCTCGAAGAAATTGGTCTTCCCCTGCAGGCTGATCAGCTCCATCCAATCGAACGGGT 26803746 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 ||| ||| | || ||||| | || || | |||||| ||| || ||||| || | Sbjct 26803745 TCTGCACATTGTAAATCTTCGAGTACCCAAGCTCACCCAGCAGCCTATCCGCCACGAACT 26803686 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC-CTAACGGGGAGCGCTTCC 159826 ||||||| | |||| | || | ||| ||||||| || | |||| || ||||| Sbjct 26803685 CGATGTACTGGCTCATCAGATCGCCGTTCATCCCCACTAGGGCGCACGGTAAG-GCTTCG 26803627 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGC-TTCGGTCACAATCTGCGAGACACGTTCGTA 159885 ||| ||||| |||| ||||| ||||| || || | ||| | || || || | Sbjct 26803626 CACACGAACTCTCTCTCTATCTCCACCGCGTTTCGT-ATGATCGACTTCACTCGATCCTC 26803568 Query 159886 CCCCGGCTTG---CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAG 159942 | | |||| | || | || |||| | |||||| ||||||||||||| Sbjct 26803567 GCTCAGCTTCTTCCTCAGCAGCGAGT------ACAGCAAGCACGCGAAGTCGCAGTGCAA 26803514 Query 159943 TCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGG 160002 ||||| || || ||||| |||||||| || | | || |||||||| | ||| ||| Sbjct 26803513 ACCCTCATCTCGCGAGATTAACTCGTTTGAGAACGTCAGTCCCGGCATTAACCCGCGCTT 26803454 Query 160003 TTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCAA 160061 || |||||||| || | ||||||| | | | | || || ||||| |||||| |||| Sbjct 26803453 CTTTAGCCAAAATATCG-CGCAAAAACTGCCCGAGAAGAATATCCCTTCCACGCAAGCAA 26803395 Query 160062 ACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATT 160121 | ||||||| || ||| |||| || | | | | | | |||| | | |||||| | Sbjct 26803394 AGGCCACGATCCGCTCCGCAAACGA---TTCTGAGCCGTCGATCCAGCGTAGGGCCCACT 26803338 Query 160122 CAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCT 160181 |||||||| | || ||| || ||| |||| ||||| ||| | |||| || ||| | Sbjct 26803337 GGGCCTTCTTCGTGACGCAGGGAATGGTATCGATGGCGTGAAAAAGCCTGTTCTTCTCGT 26803278 Query 160182 TCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGA 160241 | |||||||| || | | || |||||| || | ||| | || |||| Sbjct 26803277 CCGAGTCCTTGATGTAGGTCTCCAGAAGGAGGCTGTACATCTCGGAGTGGATGTTCTCGA 26803218 Query 160242 TGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC-CAGATACTGCACCTCCTGTGTGAAC 160300 |||| ||||| ||| |||||| ||||| ||| ||| || |||| ||||| Sbjct 26803217 TGGCGATCTGGAAGCCGTAGAAGGCGCGAGCCTCGGAGA-CCTGGACTTCCTTCATGAAC 26803159 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 ||| | ||||| | ||| | ||||| | ||| || ||||| || | |||||| Sbjct 26803158 CTTCCGGCAAGATTCTCCAAAACGATGCCGTCAGAGGCAGCGAAGAAGGCGAGCACGTGG 26803099 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 | |||||| || ||||| | | | || ||||||| || | ||| ||| Sbjct 26803098 GTGATGAAGTGCTTCTCGCCAGGGGTTAG---AGTTTCCCAATGGCGTAGGTCCTGGCAG 26803042 Query 160421 AAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 | ||||||||| || ||| |||| || |||| || | |||||||| ||||||| Sbjct 26803041 AGATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGAT 26802983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153291627520