Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3 131 2e-25 seq1 96.9 4e-15 >seq3 Length=27368013 Score = 131 bits (144), Expect = 2e-25 Identities = 309/461 (67%), Gaps = 12/461 (3%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 ||||| || || | | || || || || | |||| ||||| || | | |||||| Sbjct 9413063 TCAAGAATGTCTGCCCTGTTAGTCGCTGCAACCACAATGATACCAGTGTTGCCCTCAAAA 9413004 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| |||||||||||||| |||| |||||||| | ||||||||| | | | Sbjct 9413003 CCATCCATTTCTGTCAAAAGCTGATTAAGGGTTTGTTCTCTTTCATCATT---TCCCCCA 9412947 Query 16038 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 ||| |||| | | |||| ||| || |||||||| ||||||| || || ||||| Sbjct 9412946 CCAATTCCAGTTCCTCTTTGCCGTCCAACAGCATCAATTTCATCAACAAATACAATGCAA 9412887 Query 16095 GGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 16152 ||| ||| || || |||| ||| ||||| || || || || || ||||||| Sbjct 9412886 GGTGCATTCTCTTTGGC--CTTCTTAAAAAGATCACGAACTCGGGAAGCACCAACACCAA 9412829 Query 16153 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 16211 ||||||| || ||||| | | | | | || | || || || ||| || |||||| Sbjct 9412828 CAAACATTTCAACAAACTCAGAACCTG-AGATGGAGAAAAATGGAACACCAGCTTCACCA 9412770 Query 16212 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 16271 ||||| || || | |||||||| || || ||||| ||| | || || | ||| Sbjct 9412769 GCAATTGCCTTTGCTAACAGAGTCTTTCCAGTTCCTGGAGGACCAACAAGAAGAACCCCT 9412710 Query 16272 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATC 16331 ||||| || ||| || | | |||||||| | ||| | || ||||||| | Sbjct 9412709 TTAGGAATTCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAAGAATTCCACAACC 9412650 Query 16332 TCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 || | || || | ||||| | || | ||| ||||||| Sbjct 9412649 TCCACAAAATCCTGCTTGGCTTCATCTACCCCAGCAACATC 9412609 >seq1 Length=47851208 Score = 96.9 bits (106), Expect = 4e-15 Identities = 253/381 (66%), Gaps = 9/381 (2%) Strand=Plus/Plus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| ||||||||||| ||||| ||||| ||||| || || |||| ||||||||| | Sbjct 32999678 AAAGCCATCCATCTCCGTCAACAGCTGATTAATGGTCTGCTCCCTCTCATCATTCCC--A 32999735 Query 16034 CATACC--ACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 | | || ||| || | | ||| | ||||| ||||||||||| |||||||| || ||| Sbjct 32999736 CCTCCCATACCTGCTCCTCTCTGCCTCCCCACTGCATCAATCTCGTCAATGAACACAATG 32999795 Query 16092 CATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTGGCGCCCACAC 16149 || || ||||| | || || || | ||||| || | | || ||||| | Sbjct 32999796 CACGG--CGCTTTCGACTTGGCCTTCTCGAACAAGTCCCGCACTCTCGACGCACCCACTC 32999853 Query 16150 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCAC 16209 | ||||||| ||||| || | || || | || || || || || || || | Sbjct 32999854 CCACAAACAATTCCACGAACTCTGAAGCTGCGCAAGAGAAAAACGGCACCCCAGCCTCGC 32999913 Query 16210 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCAC 16269 | || | ||| || || ||||| ||||| || ||||| || |||| | | || | Sbjct 32999914 CGGCCACGGCCCGAGCCAGAAGGGTCTTGCCGGTACCAGGTGGACCCACCAAAAGACAGC 32999973 Query 16270 CTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAA 16329 || ||| || ||||| ||| || ||| | || || | ||| | ||||| || | Sbjct 32999974 CTTTTGGGATTTTGGCTCCAAGGGCAGTGTACTTATCTGGGTTCTTCAAGAAATCAACCA 33000033 Query 16330 TCTCTTCCAATT-CATCTTTG 16349 ||| | || || || ||||| Sbjct 33000034 CCTCCTGCAGTTCCAGCTTTG 33000054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740910218240