Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 131 2e-25 seq1 89.7 6e-13 >seq3 Length=27368013 Score = 131 bits (144), Expect = 2e-25 Identities = 309/461 (67%), Gaps = 12/461 (3%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || || | | || ||||| || | |||| ||||| || | |||||| Sbjct 9413063 TCAAGAATGTCTGCCCTGTTAGTCGCTGCAACCACAATGATACCAGTGTTGCCCTCAAAA 9413004 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||| || |||| |||||||| | ||||||||| | | | Sbjct 9413003 CCATCCATTTCTGTCAAAAGCTGATTAAGGGTTTGTTCTCTTTCATCATT---TCCCCCA 9412947 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | | |||| ||| || |||||||| ||||||| || ||||| || Sbjct 9412946 CCAATTCCAGTTCCTCTTTGCCGTCCAACAGCATCAATTTCATCAACAAATACAATGCAA 9412887 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 ||| ||| || ||| | | ||| ||||| ||||| | || || ||||||||| Sbjct 9412886 GGTGCATTCTCTTTGGCCTTCTTAAAAAGATCACGAACTCGGGAAGCACCAACACCAACA 9412827 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 ||||| || ||||| | | | | | || | || || || ||| || |||||| || Sbjct 9412826 AACATTTCAACAAACTCAGAACCTG-AGATGGAGAAAAATGGAACACCAGCTTCACCAGC 9412768 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCG 9580 ||| || || | |||||||| || || ||||| ||| | || | | ||||| Sbjct 9412767 AATTGCCTTTGCTAACAGAGTCTTTCCAGTTCCTGGAGGACCAACAAGAA--GAACCCCT 9412710 Query 9581 T--GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATC 9638 | ||||| || ||| || | | |||||||| | ||| | || ||||||| | Sbjct 9412709 TTAGGAATTCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAAGAATTCCACAACC 9412650 Query 9639 TCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679 || | || || | ||||| | || | ||| ||||||| Sbjct 9412649 TCCACAAAATCCTGCTTGGCTTCATCTACCCCAGCAACATC 9412609 >seq1 Length=47851208 Score = 89.7 bits (98), Expect = 6e-13 Identities = 190/279 (68%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9340 ||| ||||||||||| ||||| || || ||||| || || |||| ||||||||| | Sbjct 32999678 AAAGCCATCCATCTCCGTCAACAGCTGATTAATGGTCTGCTCCCTCTCATCATTCCC--A 32999735 Query 9341 CATACC--ACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 | | || ||| || | | ||| | ||||| ||||||||||| |||||||| ||||| Sbjct 32999736 CCTCCCATACCTGCTCCTCTCTGCCTCCCCACTGCATCAATCTCGTCAATGAACACAATG 32999795 Query 9399 CATGGTTGATTTTCGC-GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACC 9457 || || | ||| | ||| | || || | || || || || || ||||| || Sbjct 32999796 CACGG-CGCTTTCGACTTGGCCTTCTCGAACAAGTCCCGCACTCTCGACGCACCCACTCC 32999854 Query 9458 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 9517 ||||||| ||||| || | || || | || || || || || || || || Sbjct 32999855 CACAAACAATTCCACGAACTCTGAAGCTGCGCAAGAGAAAAACGGCACCCCAGCCTCGCC 32999914 Query 9518 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 || | ||| || || ||||| ||||| || ||||| || Sbjct 32999915 GGCCACGGCCCGAGCCAGAAGGGTCTTGCCGGTACCAGG 32999953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979384046080