Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq192 600 1e-166 seq2 522 3e-143 seq6 98.7 1e-15 >seq192 Length=157790 Score = 600 bits (664), Expect = 1e-166 Identities = 738/1003 (74%), Gaps = 4/1003 (0%) Strand=Plus/Minus Query 179739 TGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 179798 |||| | ||| || | ||| ||||| || | ||||| || || | || ||||| Sbjct 1367 TGGGGTCGCTTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 1308 Query 179799 GGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCAT 179857 || ||| ||||||| || ||| | ||| | |||||| |||| || || | || ||||| Sbjct 1307 GGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCAT 1249 Query 179858 CGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 179917 ||||| || || || || || ||||| || |||||||| || |||| || | | || Sbjct 1248 TGCTGCACCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTA 1189 Query 179918 TGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTT 179977 ||| ||||| || || |||||||| || ||||| | || || || ||| | ||||| Sbjct 1188 TGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTT 1129 Query 179978 CTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCA 180037 || || || |||||||| || || |||| || ||| | || ||||||||||||| | Sbjct 1128 TTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGA 1069 Query 180038 ACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACT 180097 ||| | || | |||||| | |||| | | |||||||||||||||||||||||| Sbjct 1068 ACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACT 1009 Query 180098 TTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCTG 180156 | || || ||||||||||||| ||||| ||| || |||||||| ||||| || || | Sbjct 1008 TAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAG 950 Query 180157 CAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGC 180216 | || ||||||| ||| | | ||||| | |||||||| || ||||||| |||| Sbjct 949 CTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGC 890 Query 180217 CCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCC 180276 |||| || || || || || ||||||| |||| |||| |||||||| ||||||||||||| Sbjct 889 CCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCC 830 Query 180277 TGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCG 180336 | |||||||| || |||||| | || ||||| ||||| |||||||| || || ||| | Sbjct 829 TTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTG 770 Query 180337 CAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCC 180396 | ||||| || || |||| |||||| || | | |||||||| |||| ||| || Sbjct 769 CTATGCATGGGTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTG 710 Query 180397 AGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATG 180456 || | ||||||| || |||||||| ||||| ||||| || ||||| || || |||| Sbjct 709 CTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATG 650 Query 180457 GATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACT 180516 | || || || || |||||||||| ||||| |||||||| || ||||| | || | Sbjct 649 GTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATT 590 Query 180517 TCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCA 180576 ||||||| || || |||||||| || || |||||||| || || | || | ||||| | Sbjct 589 TCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTA 530 Query 180577 TGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTG 180636 |||| |||||| | || ||||| || ||||| || || | ||||| |||| ||||||| Sbjct 529 TGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTG 470 Query 180637 TGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACG 180696 | | || |||||||| || | | ||||||||| || ||||||||||||||||| | Sbjct 469 TAATTAATACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATG 410 Query 180697 AGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGCTGCTGA 180739 | |||||||| || || ||||| || || || || |||| ||| Sbjct 409 AACGTAATGCCCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 367 Score = 572 bits (634), Expect = 2e-158 Identities = 737/1014 (73%), Gaps = 2/1014 (0%) Strand=Plus/Plus Query 181424 TTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 181483 ||||| || | ||||||||| | | |||||||| || ||||| || |||||||| Sbjct 34233 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGC 34292 Query 181484 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTTTT 181543 ||| | || ||||| ||| ||| | || | ||||| ||| |||| || || || ||| Sbjct 34293 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 34352 Query 181544 GTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGGTGCTAATTTCCTT 181603 || || || ||||| ||||| ||||| || |||||| | || || ||| ||| | Sbjct 34353 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTA 34412 Query 181604 ACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 181663 || || || || || || || ||| | | | | || ||| | | |||| |||||| Sbjct 34413 ACCGCCGCAGTTTCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGT 34472 Query 181664 CCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTGTG 181723 |||||||| || || ||||| || ||| ||| | || || || ||| ||||||| Sbjct 34473 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTT 34532 Query 181724 GCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG- 181782 || || ||||| || |||| || || ||||||||| | | ||||||||||||||||| Sbjct 34533 GCTCTACACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 34592 Query 181783 TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGT 181842 ||| || | | ||||| || ||||| || || || |||||||| |||||||| || || Sbjct 34593 TCTGTTCA-ATTGCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGT 34651 Query 181843 CTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGG 181902 |||||||| || || ||||| || || || || ||||||| |||||||| ||||| || Sbjct 34652 TTCTGTATTCCTAATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGG 34711 Query 181903 TGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 181962 ||| || || || || || ||| | ||||| |||| || |||||||||||||| | || Sbjct 34712 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 34771 Query 181963 TCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCA 182022 || || ||||||||||| |||||||| | |||| | || | | | || ||||| Sbjct 34772 CCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCA 34831 Query 182023 CGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAGC 182082 |||| ||||| || |||||| | | | |||| ||||| |||||||| ||| || Sbjct 34832 TGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 34891 Query 182083 ATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTC 182142 || | ||||||||| |||||||| ||||||||||| || || |||||||| ||||| Sbjct 34892 TTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 34951 Query 182143 TCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGT 182202 || ||||| || |||| ||| |||||| | ||||| |||||||||||| | ||||| Sbjct 34952 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 35011 Query 182203 TCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCG 182262 || || | ||| | |||| ||| | | || | | ||||| || || ||||| || Sbjct 35012 ACCAGTAACCGGTTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTACG 35071 Query 182263 TGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTT 182322 ||| |||||||| || || || |||||| | ||| | ||||| || || || ||||| || Sbjct 35072 TGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTT 35131 Query 182323 CTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATCA 182382 |||||| || || |||||||| || |||||| | ||||| ||| | || | ||||| Sbjct 35132 CTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 35191 Query 182383 ACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436 || ||||| ||| || | ||||||||||| || ||||| | || ||||| || Sbjct 35192 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 35245 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 110888 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 110829 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 110828 CCTACTTGGGGAG 110816 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 132699 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 132758 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 132759 CCTACTTGGGGAG 132771 >seq2 Length=30405870 Score = 522 bits (578), Expect = 3e-143 Identities = 722/1004 (72%), Gaps = 6/1004 (1%) Strand=Plus/Plus Query 179739 TGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 179798 |||| | ||| || | ||| ||||| || | ||| | || || | || ||||| Sbjct 16144562 TGGGGTTGCTTTTGTAACTGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTT 16144621 Query 179799 GGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTG--CTTCATCGTCGCCTTCA 179856 || ||| ||||||| || ||| | ||| | ||||| |||| ||| || | | |||| Sbjct 16144622 GGTGTTTTGATGATCCCTACTTTATTGACCACAACT-TCTGTACTT-ATTATTACTTTCA 16144679 Query 179857 TCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGT 179916 | ||||| || || || || || ||||| || ||| |||| || |||| || | | | Sbjct 16144680 TTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTT 16144739 Query 179917 ATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 179976 |||| ||||| || || |||||||| || ||||| | || || || ||| | |||| Sbjct 16144740 ATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACT 16144799 Query 179977 TCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCC 180036 | || || || |||||||| || || |||| || ||| | || ||||||||||||| Sbjct 16144800 TTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATG 16144859 Query 180037 AACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAAC 180096 |||| | || | |||||| |||| | | ||||||||||||||||||||| Sbjct 16144860 AACTAATTGTTCTACACTTCTCACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAGA 16144919 Query 180097 TTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCT 180155 || || || |||||| |||||| ||||| ||| || |||||||| ||||| || || Sbjct 16144920 TTAGTTTCCGTCTGGGTAGGCGCCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCA 16144978 Query 180156 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATG 180215 || || ||||||| ||| | | ||||| | |||||||| || ||||||| |||| Sbjct 16144979 GCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATG 16145038 Query 180216 CCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATC 180275 |||| || || || || || ||||||| |||| |||| |||||||| ||||||||||| Sbjct 16145039 TCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATC 16145098 Query 180276 CTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCC 180335 || |||||||| || |||||| | || | ||| ||||| |||||||| || || ||| Sbjct 16145099 CTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGT 16145158 Query 180336 GCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCC 180395 || ||||| || || |||| ||| || || | | ||||||| ||| ||| || Sbjct 16145159 GCTATGCATGGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCT 16145218 Query 180396 CAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACAT 180455 || | ||||||| || |||||||| ||||| ||||| || ||| | || || ||| Sbjct 16145219 GCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCAT 16145278 Query 180456 GGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCAC 180515 || || || || || |||||||||| ||||| |||||||| || |||| | || Sbjct 16145279 GGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACAT 16145338 Query 180516 TTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACC 180575 |||||||| || || |||||||| || || |||||||| || | | || | || || Sbjct 16145339 TTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACT 16145398 Query 180576 ATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGT 180635 ||||| |||||| | || ||||| || ||||| || || | ||||| |||| |||||| Sbjct 16145399 ATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGT 16145458 Query 180636 GTGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCAC 180695 || | || |||||||| || | | ||||||| | || ||||||||||||||||| Sbjct 16145459 GTAATTAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCAT 16145518 Query 180696 GAGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGCTGCTGA 180739 || ||||||||||| || ||||| || || || || |||| ||| Sbjct 16145519 GAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 16817655 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCTAAT 16817714 Query 141314 CCTACCTGGGG 141324 ||||| ||||| Sbjct 16817715 CCTACTTGGGG 16817725 >seq6 Length=30767194 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 180584 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAA 180643 ||| ||||| ||||| || ||||| || || | ||||| |||| |||||||| | || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 180644 CACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAA 180703 |||||||| || | | |||| |||| || |||||||| |||||||| || ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 180704 TGCTCACAACTTCC 180717 |||||| || |||| Sbjct 16007549 TGCTCATAATTTCC 16007536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610395335047680