Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq192 517 1e-141 seq2 432 4e-116 seq1 113 5e-20 >seq192 Length=157790 Score = 517 bits (572), Expect = 1e-141 Identities = 688/953 (72%), Gaps = 2/953 (0%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| || ||| | || ||| | | ||| || || Sbjct 1318 TTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATT 1260 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 |||| |||||||| |||||||| || ||||| || || || | ||||| || | || Sbjct 1259 ATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGA 1200 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||||| | ||||| ||||| || || |||||||| || |||| | || ||||| Sbjct 1199 TCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATA 1140 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| ||||| || |||||||| || | |||||||||||||| || || ||| Sbjct 1139 GGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGT 1080 Query 169681 GGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGA 169740 ||||||||| | | | | | |||||| | ||||| | | |||||||| | Sbjct 1079 GGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGT 1020 Query 169741 CAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 169800 |||||||||| | | | | || ||||| |||||||| ||||||||| || || Sbjct 1019 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCT 960 Query 169801 CCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCT 169860 || || | ||||| ||||| ||||| |||| ||| ||||||| || || ||| Sbjct 959 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCT 900 Query 169861 GATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAG 169920 || |||||||| ||||| ||||| |||||||||||||| ||| | || |||||||| ||| Sbjct 899 GACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAG 840 Query 169921 CATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCT 169980 || ||||| || ||||| || || |||||| ||| ||||| || | ||||| || || Sbjct 839 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCC 780 Query 169981 TTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAG 170040 ||||| || |||||||| || | || || || | | ||||| ||||| ||||| Sbjct 779 CTATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAA 720 Query 170041 CAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTA 170100 | || || || | ||||| | ||||| ||||| |||||||| || || || ||| Sbjct 719 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTA 660 Query 170101 GCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGA 170160 || || || ||||| ||||| || | |||||||| |||||| |||||||| || | Sbjct 659 GCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGT 600 Query 170161 AGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGT 170220 | |||| ||||||||||| | || ||||| ||| || | ||||| ||| || | ||| Sbjct 599 TCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGT 540 Query 170221 ATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCT 170280 ||| |||| ||||| |||||||| |||||||| || || || ||||| || |||||| | Sbjct 539 ATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGT 480 Query 170281 AACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAA 170340 | || | | || |||| |||| || | ||| | || ||| | ||||||||| Sbjct 479 CAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAA 420 Query 170341 GTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCATCTGCTGA 170393 |||||||||||| | ||||| || || ||||| ||||| ||||| ||| ||| Sbjct 419 GTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 367 Score = 390 bits (432), Expect = 1e-103 Identities = 713/1043 (68%), Gaps = 31/1043 (3%) Strand=Plus/Plus Query 170529 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGGTCTGGT 170588 |||||| || | || ||||||||| ||| || || || || || |||| |||||||| Sbjct 34233 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGC 34292 Query 170589 CTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACTACCTTC 170648 || || || | |||||||| || | | | || ||||||||| ||| || ||||| Sbjct 34293 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 34352 Query 170649 GTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAACTTCCTA 170708 || || ||||||||||| ||||| | || || ||| | || || ||||||||| || Sbjct 34353 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTA 34412 Query 170709 ACAGCAGCAGTTTCCACACCTGGCGACGCAATGGGT---CATAGTCTT--CTGTTCCTTT 170763 || || ||||||||||| || ||| ||| | | | | |||| |||| || | Sbjct 34413 ACCGCCGCAGTTTCCACTCC-GGC----TAATAGTTTAGCGCACTCTTTGTTGTTACTAT 34467 Query 170764 GGGGACCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAACT 170823 |||| |||||||||||||| ||| |||||||| ||| | || ||| | |||| | Sbjct 34468 GGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTT 34527 Query 170824 TTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCAGACAATTTGAGATCG 170883 |||| || |||| || | || ||||| |||||||| ||| | | |||||||| | | Sbjct 34528 TTGTTGCTCTACACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTG 34587 Query 170884 CAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCT 170943 | || ||| | ||||||| || ||| |||||||||| | | || || || | Sbjct 34588 CTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTT 34647 Query 170944 TCACTAGCATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCAT 171003 | | | || || || ||||| ||||||||| ||||||| || || || | Sbjct 34648 TTGTTTCTGTATTCCTAATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTT 34707 Query 171004 TCGGTGTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACAT 171063 | ||||| ||||| || ||||| | ||| | || | ||||| || || || |||| Sbjct 34708 TTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACAT 34767 Query 171064 TGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCA 171123 |||| |||||||| |||||||| ||||| || | | || | || | ||||| || | Sbjct 34768 TGAACCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTA 34827 Query 171124 TTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGATAATA 171183 |||||||||| || || | || || || | ||||| || |||| Sbjct 34828 TTCATGGTGCTACCGTAGAAAATACTTTATTTGAAG------------ATGGTGAT---- 34871 Query 171184 AAATTCAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACAGTA 171243 | |||| ||||||||||| ||| | || || || | ||||||||||| | Sbjct 34872 -GGTGCAAA----TACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAA 34926 Query 171244 TGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAGAT 171303 || | || || ||| | || ||||| || || ||||| ||||||| || || ||| | | Sbjct 34927 TGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTT 34986 Query 171304 TTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAGGTA 171363 ||||| ||| ||||||| || || || || | ||| |||||| || | || Sbjct 34987 GGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTGTGGATGAGTGCTCTTGGAG 35046 Query 171364 TCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAG 171423 | || ||||| || |||||||| | || || || || || ||||| || || | |||| Sbjct 35047 TAGTCGGTCTGGCCCTTAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAG 35106 Query 171424 CAGAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGA 171483 | ||||| || || || |||||||||||||| || ||||| || | || |||||||| Sbjct 35107 CGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTC 35166 Query 171484 GAGCATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTGT 171543 | || |||||| | | || || || ||||| ||| | ||||||| || || || Sbjct 35167 GTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTC 35226 Query 171544 TACCAAGAGGTAACGCACTTTAA 171566 |||| | || ||||| |||||| Sbjct 35227 TACCCCGTGGAAACGCTCTTTAA 35249 >seq2 Length=30405870 Score = 432 bits (478), Expect = 4e-116 Identities = 669/953 (70%), Gaps = 2/953 (0%) Strand=Plus/Plus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGTT-TCATC 169500 |||| |||||||||||| | ||||| || ||| | || || | | ||| | || Sbjct 16144611 TTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCACAACTTC-TGTACTTATT 16144669 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 || | |||||||| |||||||| || ||||| || || || | |||| || | || Sbjct 16144670 ATTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGA 16144729 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||||| | ||||| ||||| || || |||||||| || |||| | || ||||| Sbjct 16144730 TCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATA 16144789 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| ||||| || |||||||| || | |||||||||||||| || || ||| Sbjct 16144790 GGTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGT 16144849 Query 169681 GGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGA 169740 ||||||||| | | | | | |||||| ||||| | | |||||||| | Sbjct 16144850 GGTCCTTATGAACTAATTGTTCTACACTTCTCACTTGGTGTAGCTTGCTACATGGGTCGT 16144909 Query 169741 CAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 169800 ||||||| | | | | | || | ||| |||||||| ||||||||| || || Sbjct 16144910 GAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCT 16144969 Query 169801 CCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCT 169860 || || | ||||| ||||| ||||| |||| ||| ||||||| || || ||| Sbjct 16144970 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCT 16145029 Query 169861 GATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAG 169920 || | ||| | ||||| ||||| |||||||||||||| ||| | || |||||||| || Sbjct 16145030 GACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAG 16145089 Query 169921 CATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCT 169980 || ||||| || ||||| || || |||||| ||| | ||| || | ||||| || || Sbjct 16145090 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCC 16145149 Query 169981 TTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAG 170040 ||||| || |||||||| || | || || | | | ||||| ||||| | | | Sbjct 16145150 CTATTCAGTGCTATGCATGGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAA 16145209 Query 170041 CAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTA 170100 | || || || | ||||| | ||||| ||||| |||||||| || || || || Sbjct 16145210 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATA 16145269 Query 170101 GCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGA 170160 || || || ||||| ||||| || | |||||||| |||||| |||||||| || | Sbjct 16145270 GCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGT 16145329 Query 170161 AGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGT 170220 | |||| ||||||||||| | || ||||| ||| || | ||||| ||| || | ||| Sbjct 16145330 TCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGT 16145389 Query 170221 ATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCT 170280 ||| | || ||||| |||||||| |||||||| || || || ||||| || |||||| | Sbjct 16145390 ATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGT 16145449 Query 170281 AACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAA 170340 | || | | || |||| |||| || | ||| | | ||| | ||||||||| Sbjct 16145450 CAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAA 16145509 Query 170341 GTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCATCTGCTGA 170393 |||||||||||| | ||||| || || ||||| ||||| ||||| ||| ||| Sbjct 16145510 GTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq1 Length=47851208 Score = 113 bits (124), Expect = 5e-20 Identities = 163/228 (71%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 ||||||| ||| || | || ||||||||| |||| ||||| ||||||||||||||| Sbjct 35961737 GATATTGTTGTTGGCTCTGCACAGAGGTTTGGTGTTCCAATGGGTTATGGAGGTCCTCAT 35961796 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAG-- 153864 || |||||| | || || | | |||| ||||| | ||| || || |||||| | | Sbjct 35961797 GCAGCATTCCTGGCCACCTCCCAAGAGTACAAGAGGATGATGCCGGGAAGAATTATTGGT 35961856 Query 153865 GTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGC 153924 || ||| || ||| | ||| || || | | || | ||||| || |||| Sbjct 35961857 GTTAGT--GTTGATTCTTCAGGGAAGCCTGCGCTGCGTATGGCGATGCAGACAAGGGAGC 35961914 Query 153925 AGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGG 153972 | ||||||||||| ||||| || ||||| ||||| ||||| ||||||| Sbjct 35961915 AACATATCAGGAGGGACAAGGCTACCAGCAACATTTGCACTGCTCAGG 35961962 Score = 93.3 bits (102), Expect = 5e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 154989 CAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACAT 155048 ||||| || || ||| ||| || | ||| || ||||| || ||||| || | || Sbjct 35964201 CAGGTTGGTCTGACAAGCCCAGGTTGGATTGGAGCTGATGTTTGCCATCTCAATCTCCAC 35964260 Query 155049 AAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||||| || ||||||||||||||||| ||||||||| | |||||||| ||||| Sbjct 35964261 AAAACATTTTGCATTCCACATGGAGGTGGTGGTCCTGGCATGGGTCCTATTGGTGT 35964316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211409889280