Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq192 594 6e-165 seq2 513 2e-140 seq6 105 8e-18 >seq192 Length=157790 Score = 594 bits (658), Expect = 6e-165 Identities = 720/974 (74%), Gaps = 6/974 (1%) Strand=Plus/Minus Query 167884 ACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 167943 ||| | ||||| || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 1337 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 1278 Query 167944 GCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCAT 168002 |||||| ||||| || || | || ||| | ||||| || || || || || || || || Sbjct 1277 GCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTAT 1219 Query 168003 CCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGT 168062 |||||||| || |||| || | | ||||| ||||| || || |||||||| || | Sbjct 1218 TCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTAT 1159 Query 168063 CCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCATCTGGGAAGCAGCATCACTCGA 168122 ||| | ||| ||||| || | ||||| || || || |||||||| || || | || Sbjct 1158 TCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGA 1099 Query 168123 TGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAGTCTTTCACTTCCTCATCGGTAT 168182 ||| ||||| || ||||||||||||| ||||| | || | |||||| | | ||| | Sbjct 1098 TGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGT 1039 Query 168183 --CTATGCATACATGGGACGTGAATGGGAACTTTCATATCGTTTAGGTATGCGTCCATGG 168240 || ||| |||||||| ||||| ||||||||| | ||| | |||||||| || ||| Sbjct 1038 AGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGG 981 Query 168241 ATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTGTATCCT 168300 || ||||||||| || || || || || || || | ||| || ||| | | ||||| Sbjct 980 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCA 921 Query 168301 TTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTAC 168360 | |||||||| || || ||||| | ||||| || |||||||| || || ||||||| | Sbjct 920 ATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTC 861 Query 168361 ATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTT 168420 ||| | || |||||||| |||||||| || || ||||| || || || ||| | ||||| Sbjct 860 ATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTA 801 Query 168421 GCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCT 168480 ||||| ||||| || ||| | || ||||||||||| || ||||| || ||| | Sbjct 800 GCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGT 741 Query 168481 CTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAA 168540 | | || || || || |||| ||||| || | ||||||| ||||| ||||| Sbjct 740 TTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAG 681 Query 168541 GAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATAC 168600 |||||||| || || |||||||||||||||||||| || || || |||||||||||||| Sbjct 680 GAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATAT 621 Query 168601 GCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGC 168660 ||| |||||||| || || || || || |||||||| ||||| |||||||| || || Sbjct 620 GCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGT 561 Query 168661 ATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTC 168720 |||||||| ||||| | || || ||| ||||| |||||| | || ||||| || ||| Sbjct 560 ATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTC 501 Query 168721 AACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTGAAC 168780 || || || | ||||| ||||||||||||| | || || ||||| ||| || | ||| Sbjct 500 AATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAAC 441 Query 168781 CGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGAT 168840 |||||| || |||||||||||||||||||| ||||| || || || ||||| || ||| Sbjct 440 CGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGAT 381 Query 168841 CTTGCTGCTGCTGA 168854 || ||||||| ||| Sbjct 380 CTAGCTGCTGTTGA 367 Score = 540 bits (598), Expect = 1e-148 Identities = 730/1016 (72%), Gaps = 6/1016 (1%) Strand=Plus/Plus Query 169307 TTCGATGTTCTCGATGACTGGCTCAAACGCGACCGCTTTGTATTCATTGGTTGGTCTGGT 169366 || ||| || | ||||||||| | | |||||||| || || | ||||||||||| Sbjct 34233 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGC 34292 Query 169367 CTACTTCTTCTTCCCACTGCCTATCTTGCTATTGGAGGGTGGCTCACTGGTACAGCGTTT 169426 ||| | || |||| ||||||| | ||| | || || ||| |||| |||||| | ||| Sbjct 34293 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 34352 Query 169427 GTTACTTCCTGGTACACCCACGGACTCGC---TTCCAGTTACTTAGAAGGCGCTAACTTC 169483 || ||||| ||||| ||||| ||| | || |||| || || |||||| ||||||| Sbjct 34353 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCC---TATTTGGAAGGCTGTAACTTC 34409 Query 169484 CTCACTGCTGCTGTCAGTACACCTGCTGACGCTATGGGACACTCACTGCTCTTGCTATGG 169543 | || || || || || || ||| | | | | ||||| || | || |||||| Sbjct 34410 TTAACCGCCGCAGTTTCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGG 34469 Query 169544 GGTCCAGAAGCACAAGGCGATTTCGTTCGCTGGTGTCAATTGGGTGGTCTCTGGAACTTT 169603 ||||| ||||||||||| ||||| ||| ||||||||||| || ||||| |||| ||| Sbjct 34470 GGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTT 34529 Query 169604 GTAGCACTTCATGGTGCATTTGCATTGATTGGTTTCATGCTTAGGCAGTTTGAATTGGCA 169663 || || || || || || || | | | || ||||| ||| | | || |||||| | || Sbjct 34530 GTTGCTCTACACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCT 34589 Query 169664 CGTCTTATTGGCATCCGTCCTTATAATGCTATTGCATTCTCTGGTCCTATTGCTGTATTT 169723 || | || | || ||||||||||| || |||||||| ||||| |||||||| ||| Sbjct 34590 CGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTT 34649 Query 169724 GTCAGTGTCTTTCTTATCTACCCACTTGGACAGTCCTCATGGTTCTTTGCTCCCTCCTTT 169783 || ||| || || || || || || || ||||| ||||| ||||| ||| ||| Sbjct 34650 GTTTCTGTATTCCTAATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTT 34709 Query 169784 GGAGTATCAGCAATCTTCAGGTTCCTGTTGTTCCTGCAAGGATTCCACAACTGGACGTTG 169843 || ||| |||| || || | ||| | | || | ||||| || || || ||||| ||| Sbjct 34710 GGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTG 34769 Query 169844 AATCCATTCCACATGATGGGTGTAGCAGGAATCTTGGGCGGAGCATTGCTTTCTGCTATC 169903 || ||||| || |||||||| || || || | ||||||| || || | | ||||| Sbjct 34770 AACCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATT 34829 Query 169904 CATGGTGTTACAGTAGAGAACACATTGTATGAAGACGGTGAGCAGGCAAATACTTTCAAG 169963 ||||||| ||| ||||| || || || | |||||| ||||| |||||||| ||| Sbjct 34830 CATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGT 34889 Query 169964 GCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 170023 || ||| | | || || | ||||| |||||||| |||||||| || |||||||| ||| Sbjct 34890 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGG 34949 Query 170024 TCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGTTGGCTTCATTTTTTCATGTTGTTT 170083 || || ||||| || |||| ||||| || || |||||| | ||||| || ||||| ||| Sbjct 34950 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 35009 Query 170084 GTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTT 170143 || || || | ||| | |||| || |||| | | || || || || || || Sbjct 35010 GTACCAGTAACCGGTTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTA 35069 Query 170144 CGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACC 170203 ||||| || || ||||| |||||| ||| | ||||| |||||||| ||||||||||| Sbjct 35070 CGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACT 35129 Query 170204 TTCTACACCAAAAACATCCTATTGAATGAAGGACTTCGTGCATGGTTGGCACCTGCTGAT 170263 |||||||||||||| || || || || ||||| ||||||| ||| |||| || ||| Sbjct 35130 TTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGAT 35189 Query 170264 CAACCACATGAAAACTTCATCTTCCCAGAAGAAGTTCTTCCGAGAGGTAACGCACT 170319 || || ||||||||| | || ||||| || || ||||| || | || ||||| || Sbjct 35190 CAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 35245 >seq2 Length=30405870 Score = 513 bits (568), Expect = 2e-140 Identities = 703/974 (72%), Gaps = 6/974 (1%) Strand=Plus/Plus Query 167884 ACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCA 167943 ||| | ||| | || || | || ||||| || || ||||||| || ||| | ||| | Sbjct 16144592 ACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACC 16144651 Query 167944 GCAACTATCTGTT-TCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCAT 168002 ||||| ||||| | || | | ||| | ||||| || || || || || || || || Sbjct 16144652 ACAACT-TCTGTACTTATTATTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTAT 16144710 Query 168003 CCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGT 168062 ||| |||| || |||| || | | ||||| ||||| || || |||||||| || | Sbjct 16144711 TCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTAT 16144770 Query 168063 CCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCATCTGGGAAGCAGCATCACTCGA 168122 ||| | ||| ||||| || | ||||| || || || |||||||| || || | || Sbjct 16144771 TCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGA 16144830 Query 168123 TGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAGTCTTTCACTTC-CTCATCG-GT 168180 ||| ||||| || ||||||||||||| ||||| | || | |||||| | | | | || Sbjct 16144831 TGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTCACTTGGTGT 16144890 Query 168181 ATCTATGCATACATGGGACGTGAATGGGAACTTTCATATCGTTTAGGTATGCGTCCATGG 168240 | || ||| |||||||| ||||| ||||| || | ||| | |||| ||| || ||| Sbjct 16144891 AGCT-TGC-TACATGGGTCGTGAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGG 16144948 Query 168241 ATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTGTATCCT 168300 || ||||||||| || || || || || || || | ||| || ||| | | ||||| Sbjct 16144949 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCA 16145008 Query 168301 TTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTAC 168360 | |||||||| || || ||||| | |||| | || |||||||| || || ||||||| | Sbjct 16145009 ATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTC 16145068 Query 168361 ATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTT 168420 ||| | || ||||||||| ||||||| || || ||||| || || || ||| | |||| Sbjct 16145069 ATGATTGTATTCCAAGCTAAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGCA 16145128 Query 168421 GCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCT 168480 || || ||||| || ||| | || ||||||||||| || ||||| || || | Sbjct 16145129 GCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCCCTAGT 16145188 Query 168481 CTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAA 168540 | | || || || | ||| ||||| || | ||||||| ||||| ||||| Sbjct 16145189 TTGATCAGGGAAACCATAAAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAG 16145248 Query 168541 GAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATAC 168600 |||||||| || || ||| |||||||||||||||| || || || |||||||||||||| Sbjct 16145249 GAAGAAACCTATAATATCATAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATAT 16145308 Query 168601 GCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGC 168660 ||| |||||||| || | || || || |||||||| ||||| |||||||| || || Sbjct 16145309 GCTAGTTTCAACAATTCTTGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGT 16145368 Query 168661 ATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTC 168720 |||||||| ||| | | || || || ||||| |||||| | || ||||| || ||| Sbjct 16145369 ATCTGGTTTACCACTTTAGGTATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTC 16145428 Query 168721 AACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTGAAC 168780 || || || | ||||| ||||||||||||| | || || ||||| ||| || | ||| Sbjct 16145429 AATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAAC 16145488 Query 168781 CGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGAT 168840 |||| | || |||||||||||||||||||| ||||| || || || ||||| || ||| Sbjct 16145489 CGCGTTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGAT 16145548 Query 168841 CTTGCTGCTGCTGA 168854 || ||||||| ||| Sbjct 16145549 CTAGCTGCTGTTGA 16145562 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 168520 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 168579 |||||||| |||| ||||| |||||||| || || |||||||||||||||||||| || Sbjct 26097516 GGTTACAAATTCGATCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTT 26097575 Query 168580 GGTCGTTTGATCTT 168593 || || |||||||| Sbjct 26097576 GGCCGATTGATCTT 26097589 >seq6 Length=30767194 Score = 105 bits (116), Expect = 8e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 168699 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 168758 ||| || || ||||| || ||||| || || | ||||| ||||||||||||| | || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 168759 CACCTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAA 168818 || ||||| ||| || | |||| |||| || |||||||| ||||||||||| ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 168819 CGCACACAACTTCCCACTCGATCTTGCTGCTGCTGA 168854 || || || |||| || ||| | ||| ||| ||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 Score = 93.3 bits (102), Expect = 5e-14 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 168520 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 168579 ||||||| ||||| ||||| |||||||| || || || ||||||||||||||||| || Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 168580 GGTCGTTTGATCTTCCAATACGCT 168603 || || |||||||||||||| ||| Sbjct 12498377 GGCCGATTGATCTTCCAATATGCT 12498354 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 168520 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 168579 ||||||| ||||| ||||| |||||||| || | || ||||||||||||||||| || Sbjct 12498661 GGTTACATATTCGGTCAAGAGGAAGAAACCTATTATATTGTAGCCGCTCATGGTTATTTT 12498602 Query 168580 GGTCGTTTGATCTTCCAATACGCTTCA 168606 || || |||||||||||||| ||| || Sbjct 12498601 GGCCGATTGATCTTCCAATATGCTACA 12498575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574472221263360