Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq192 670 0.0 seq2 583 1e-161 seq6 105 7e-18 >seq192 Length=157790 Score = 670 bits (742), Expect = 0.0 Identities = 733/968 (76%), Gaps = 6/968 (1%) Strand=Plus/Minus Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871 ||||| || || |||| ||||| || ||| ||||||||||||| | | | ||||| Sbjct 1331 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1272 Query 163872 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930 ||||| || || | || ||| | ||||| || || || || || |||||||||||||| Sbjct 1271 -TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGA 1213 Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 163990 ||||||| | || || | | ||||| ||||| || || |||||||| || |||| | Sbjct 1212 ACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1153 Query 163991 GTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050 || || || ||| | ||||| ||||| || |||||||| || ||| |||||||||| Sbjct 1152 CTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 1093 Query 164051 GCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTAT--CTAT 164108 | | |||||||||||||||| |||| | || | |||||| | | ||| | || | Sbjct 1092 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-T 1034 Query 164109 GCATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGT 164168 || ||||||||||||||||||||||| || |||||| |||||||| ||||||||| | Sbjct 1033 GC-TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 975 Query 164169 GTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGT 164228 ||||| || || || || |||||||| || | || || ||| || | ||||| | ||| Sbjct 974 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGT 915 Query 164229 CAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTG 164288 ||||| || ||||||| |||||||| || ||||| || || ||||||| |||| | Sbjct 914 CAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGATT 855 Query 164289 GTGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGC 164348 || |||||||| |||||||||||||| |||||||| || || ||| | ||||| ||||| Sbjct 854 GTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGT 795 Query 164349 GTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTT 164408 ||||| ||||| || || |||||||| ||||| || || |||| || ||| || | Sbjct 794 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGTTTGATC 735 Query 164409 CGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAA 164468 | |||||||| |||| ||| || || | ||||||| || |||||||| |||||| Sbjct 734 AGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAA 675 Query 164469 ACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCA 164528 || || || || || |||||||| ||||| ||||| || ||||||||||||| ||| Sbjct 674 ACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 615 Query 164529 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGG 164588 |||||||| || ||||| || || |||||||| ||||| |||||||| || || |||||| Sbjct 614 TTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGG 555 Query 164589 TTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 164648 || ||||| | ||| | ||| ||||| |||||| | || ||||| || ||||| || Sbjct 554 TTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAA 495 Query 164649 TCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCT 164708 || | | ||| ||||||||||||| | || |||||||| || || | ||||||||| Sbjct 494 TCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGCT 435 Query 164709 GGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCT 164768 || ||||||||||||||||| || ||||| || || || |||||||| ||||| ||| Sbjct 434 AACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATCTAGCT 375 Query 164769 GCTGCTGA 164776 |||| ||| Sbjct 374 GCTGTTGA 367 Score = 565 bits (626), Expect = 3e-156 Identities = 728/1002 (73%), Gaps = 2/1002 (0%) Strand=Plus/Plus Query 165206 GATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 165265 ||||||||| | | || || ||||||||||| ||||||||||| || | || ||| Sbjct 34245 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTT 34304 Query 165266 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 165325 || ||| ||| | ||| | || |||||| | || || || || || | || ||| Sbjct 34305 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 34364 Query 165326 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGTGCAAACTTTCTTACTGCGGCAGTT 165385 ||||| || || || |||||||||||| |||| || ||||| | || || |||||| Sbjct 34365 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTAACCGCCGCAGTT 34424 Query 165386 TCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAA 165445 || ||||| || | | | | || ||| | || | || ||||||||||| || ||| Sbjct 34425 TCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 34484 Query 165446 GGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGG 165505 || ||||| | ||| ||| | || || || ||| ||||||| || || ||||| Sbjct 34485 GGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTACACGGC 34544 Query 165506 GCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACG-TCTCATCGGTAT 165564 ||||||| ||||| ||||| ||| | ||||| |||||| | || || ||| || | | Sbjct 34545 GCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 34603 Query 165565 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 165624 || || || ||||| || || ||||| ||||| || |||||||||||| || || || Sbjct 34604 GCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCT 34663 Query 165625 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAAT 165684 || || || || ||||| || |||||||||| || || ||| || || ||||| || Sbjct 34664 AATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTAT 34723 Query 165685 CTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCATAT 165744 || | ||| | ||||| | ||||| || ||||| ||||| ||||| || |||||||| Sbjct 34724 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 34783 Query 165745 GATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGT 165804 |||||| ||||| || | |||| | ||| || | | || || ||||||| ||| || Sbjct 34784 GATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGT 34843 Query 165805 AGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCTAC 165864 ||| |||||| | | | |||||||||| | ||||||||| ||| || ||| || | || Sbjct 34844 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 34903 Query 165865 TCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTCGG 165924 ||||| |||||||| || |||||||| || || ||||| || ||||| || ||||| || Sbjct 34904 TCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGG 34963 Query 165925 TATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 165984 |||| ||| ||||| | ||||| |||||||||||| | ||||| || || | || Sbjct 34964 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 35023 Query 165985 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 166044 | | |||| ||| | | || | | ||||| || || ||||| ||||| |||||||| Sbjct 35024 TTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTACGTGCCTATGACTT 35083 Query 166045 TGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAAAAA 166104 || || || || ||| | ||||| ||||| || || ||||| || |||||||| ||||| Sbjct 35084 CGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAA 35143 Query 166105 CATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATGAGAA 166164 |||||||| || |||||| ||||||||||| |||| | ||||| || ||||| || Sbjct 35144 TATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 35203 Query 166165 CTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCT 166206 | || | |||||||| || ||||| || | || ||||| || Sbjct 35204 CCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 35245 >seq2 Length=30405870 Score = 583 bits (646), Expect = 1e-161 Identities = 714/968 (74%), Gaps = 6/968 (1%) Strand=Plus/Plus Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871 ||| | || || |||| ||||| || ||| ||||||||||||| | | | |||| Sbjct 16144598 AACTGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCACAACT 16144657 Query 163872 ATCTGTT-TCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930 ||||| | || | | ||| | ||||| || || || || || |||||||||||| | Sbjct 16144658 -TCTGTACTTATTATTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAA 16144716 Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 163990 ||||||| | || || | | ||||| ||||| || || |||||||| || |||| | Sbjct 16144717 ACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 16144776 Query 163991 GTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050 || || || ||| | ||||| ||||| || |||||||| || ||| |||||||||| Sbjct 16144777 CTCTGCAGCTATAGGTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 16144836 Query 164051 GCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTAT--CTAT 164108 | | |||||||||||||||| |||| | || | |||||| | ||| | || | Sbjct 16144837 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTCACTTGGTGTAGCT-T 16144895 Query 164109 GCATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGT 164168 || |||||||||||||||||||| | || |||||| |||| ||| ||||||||| | Sbjct 16144896 GC-TACATGGGTCGTGAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCT 16144954 Query 164169 GTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGT 164228 ||||| || || || || |||||||| || | || || ||| || | ||||| | ||| Sbjct 16144955 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGT 16145014 Query 164229 CAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTG 164288 ||||| || ||||||| |||| |||| || ||||| || || ||||||| |||| | Sbjct 16145015 CAAGGAAGCTTTTCTGACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATT 16145074 Query 164289 GTGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGC 164348 || |||||||| ||||||||||||| |||||||| || || ||| | |||| || || Sbjct 16145075 GTATTCCAAGCTAAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGT 16145134 Query 164349 GTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTT 164408 ||||| ||||| || || |||||||| ||||| || || |||| || || || | Sbjct 16145135 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCCCTAGTTTGATC 16145194 Query 164409 CGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAA 164468 | ||||||| ||| ||| || || | ||||||| || |||||||| |||||| Sbjct 16145195 AGGGAAACCATAAAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAA 16145254 Query 164469 ACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCA 164528 || || || || | |||||||| ||||| ||||| || ||||||||||||| ||| Sbjct 16145255 ACCTATAATATCATAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 16145314 Query 164529 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGG 164588 |||||||| || |||| || || |||||||| ||||| |||||||| || || |||||| Sbjct 16145315 TTCAACAATTCTTGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGG 16145374 Query 164589 TTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 164648 || ||| | | ||| | || ||||| |||||| | || ||||| || ||||| || Sbjct 16145375 TTTACCACTTTAGGTATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAA 16145434 Query 164649 TCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCT 164708 || | | ||| ||||||||||||| | || |||||||| || || | ||||||| | Sbjct 16145435 TCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTT 16145494 Query 164709 GGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCT 164768 || ||||||||||||||||| || ||||| ||||| || |||||||| ||||| ||| Sbjct 16145495 AACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCT 16145554 Query 164769 GCTGCTGA 164776 |||| ||| Sbjct 16145555 GCTGTTGA 16145562 >seq6 Length=30767194 Score = 105 bits (116), Expect = 7e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 164621 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAA 164680 ||| || || ||||| || ||||| || || | | ||| ||||||||||||| | || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 164681 CACTTGGGCAGACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAA 164740 |||||||| || || | |||| |||| || |||||||| |||||||| || ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 164741 CGCTCACAACTTCCCTCTGGATCTCGCTGCTGCTGA 164776 ||||| || |||| ||| ||| | ||| ||| ||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 164442 GGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTT 164501 ||||||| || |||||||| |||||||| || || ||||| |||||||| ||||| ||| Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 164502 GGTCGTCTGATCTTCCAATACGCT 164525 || || ||||||||||||| ||| Sbjct 12498377 GGCCGATTGATCTTCCAATATGCT 12498354 Score = 86.0 bits (94), Expect = 7e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 164442 GGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTT 164501 ||||||| || |||||||| |||||||| || | ||||| |||||||| ||||| ||| Sbjct 12498661 GGTTACATATTCGGTCAAGAGGAAGAAACCTATTATATTGTAGCCGCTCATGGTTATTTT 12498602 Query 164502 GGTCGTCTGATCTTCCAATACGCTTCA 164528 || || ||||||||||||| ||| || Sbjct 12498601 GGCCGATTGATCTTCCAATATGCTACA 12498575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556923463380480