Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02]
192 sequences; 227,569,171 total letters
Query= NC_015282.1
Length=174079
Score E
Sequences producing significant alignments: (Bits) Value
seq192 670 0.0
seq2 583 1e-161
seq6 105 7e-18
>seq192
Length=157790
Score = 670 bits (742), Expect = 0.0
Identities = 733/968 (76%), Gaps = 6/968 (1%)
Strand=Plus/Minus
Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871
||||| || || |||| ||||| || ||| ||||||||||||| | | | |||||
Sbjct 1331 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1272
Query 163872 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930
||||| || || | || ||| | ||||| || || || || || ||||||||||||||
Sbjct 1271 -TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGA 1213
Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 163990
||||||| | || || | | ||||| ||||| || || |||||||| || |||| |
Sbjct 1212 ACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1153
Query 163991 GTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050
|| || || ||| | ||||| ||||| || |||||||| || ||| ||||||||||
Sbjct 1152 CTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 1093
Query 164051 GCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTAT--CTAT 164108
| | |||||||||||||||| |||| | || | |||||| | | ||| | || |
Sbjct 1092 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-T 1034
Query 164109 GCATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGT 164168
|| ||||||||||||||||||||||| || |||||| |||||||| ||||||||| |
Sbjct 1033 GC-TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 975
Query 164169 GTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGT 164228
||||| || || || || |||||||| || | || || ||| || | ||||| | |||
Sbjct 974 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGT 915
Query 164229 CAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTG 164288
||||| || ||||||| |||||||| || ||||| || || ||||||| |||| |
Sbjct 914 CAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGATT 855
Query 164289 GTGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGC 164348
|| |||||||| |||||||||||||| |||||||| || || ||| | ||||| |||||
Sbjct 854 GTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGT 795
Query 164349 GTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTT 164408
||||| ||||| || || |||||||| ||||| || || |||| || ||| || |
Sbjct 794 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGTTTGATC 735
Query 164409 CGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAA 164468
| |||||||| |||| ||| || || | ||||||| || |||||||| ||||||
Sbjct 734 AGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAA 675
Query 164469 ACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCA 164528
|| || || || || |||||||| ||||| ||||| || ||||||||||||| |||
Sbjct 674 ACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 615
Query 164529 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGG 164588
|||||||| || ||||| || || |||||||| ||||| |||||||| || || ||||||
Sbjct 614 TTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGG 555
Query 164589 TTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 164648
|| ||||| | ||| | ||| ||||| |||||| | || ||||| || ||||| ||
Sbjct 554 TTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAA 495
Query 164649 TCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCT 164708
|| | | ||| ||||||||||||| | || |||||||| || || | |||||||||
Sbjct 494 TCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGCT 435
Query 164709 GGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCT 164768
|| ||||||||||||||||| || ||||| || || || |||||||| ||||| |||
Sbjct 434 AACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATCTAGCT 375
Query 164769 GCTGCTGA 164776
|||| |||
Sbjct 374 GCTGTTGA 367
Score = 565 bits (626), Expect = 3e-156
Identities = 728/1002 (73%), Gaps = 2/1002 (0%)
Strand=Plus/Plus
Query 165206 GATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 165265
||||||||| | | || || ||||||||||| ||||||||||| || | || |||
Sbjct 34245 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTT 34304
Query 165266 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 165325
|| ||| ||| | ||| | || |||||| | || || || || || | || |||
Sbjct 34305 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 34364
Query 165326 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGTGCAAACTTTCTTACTGCGGCAGTT 165385
||||| || || || |||||||||||| |||| || ||||| | || || ||||||
Sbjct 34365 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTAACCGCCGCAGTT 34424
Query 165386 TCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAA 165445
|| ||||| || | | | | || ||| | || | || ||||||||||| || |||
Sbjct 34425 TCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 34484
Query 165446 GGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGG 165505
|| ||||| | ||| ||| | || || || ||| ||||||| || || |||||
Sbjct 34485 GGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTACACGGC 34544
Query 165506 GCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACG-TCTCATCGGTAT 165564
||||||| ||||| ||||| ||| | ||||| |||||| | || || ||| || | |
Sbjct 34545 GCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 34603
Query 165565 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 165624
|| || || ||||| || || ||||| ||||| || |||||||||||| || || ||
Sbjct 34604 GCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCT 34663
Query 165625 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAAT 165684
|| || || || ||||| || |||||||||| || || ||| || || ||||| ||
Sbjct 34664 AATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTAT 34723
Query 165685 CTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCATAT 165744
|| | ||| | ||||| | ||||| || ||||| ||||| ||||| || ||||||||
Sbjct 34724 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 34783
Query 165745 GATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGT 165804
|||||| ||||| || | |||| | ||| || | | || || ||||||| ||| ||
Sbjct 34784 GATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGT 34843
Query 165805 AGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCTAC 165864
||| |||||| | | | |||||||||| | ||||||||| ||| || ||| || | ||
Sbjct 34844 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 34903
Query 165865 TCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTCGG 165924
||||| |||||||| || |||||||| || || ||||| || ||||| || ||||| ||
Sbjct 34904 TCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGG 34963
Query 165925 TATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 165984
|||| ||| ||||| | ||||| |||||||||||| | ||||| || || | ||
Sbjct 34964 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 35023
Query 165985 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 166044
| | |||| ||| | | || | | ||||| || || ||||| ||||| ||||||||
Sbjct 35024 TTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTACGTGCCTATGACTT 35083
Query 166045 TGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAAAAA 166104
|| || || || ||| | ||||| ||||| || || ||||| || |||||||| |||||
Sbjct 35084 CGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAA 35143
Query 166105 CATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATGAGAA 166164
|||||||| || |||||| ||||||||||| |||| | ||||| || ||||| ||
Sbjct 35144 TATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 35203
Query 166165 CTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCT 166206
| || | |||||||| || ||||| || | || ||||| ||
Sbjct 35204 CCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 35245
>seq2
Length=30405870
Score = 583 bits (646), Expect = 1e-161
Identities = 714/968 (74%), Gaps = 6/968 (1%)
Strand=Plus/Plus
Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871
||| | || || |||| ||||| || ||| ||||||||||||| | | | ||||
Sbjct 16144598 AACTGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCACAACT 16144657
Query 163872 ATCTGTT-TCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930
||||| | || | | ||| | ||||| || || || || || |||||||||||| |
Sbjct 16144658 -TCTGTACTTATTATTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAA 16144716
Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 163990
||||||| | || || | | ||||| ||||| || || |||||||| || |||| |
Sbjct 16144717 ACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 16144776
Query 163991 GTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050
|| || || ||| | ||||| ||||| || |||||||| || ||| ||||||||||
Sbjct 16144777 CTCTGCAGCTATAGGTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 16144836
Query 164051 GCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTAT--CTAT 164108
| | |||||||||||||||| |||| | || | |||||| | ||| | || |
Sbjct 16144837 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTCACTTGGTGTAGCT-T 16144895
Query 164109 GCATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGT 164168
|| |||||||||||||||||||| | || |||||| |||| ||| ||||||||| |
Sbjct 16144896 GC-TACATGGGTCGTGAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCT 16144954
Query 164169 GTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGT 164228
||||| || || || || |||||||| || | || || ||| || | ||||| | |||
Sbjct 16144955 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGT 16145014
Query 164229 CAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTG 164288
||||| || ||||||| |||| |||| || ||||| || || ||||||| |||| |
Sbjct 16145015 CAAGGAAGCTTTTCTGACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATT 16145074
Query 164289 GTGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGC 164348
|| |||||||| ||||||||||||| |||||||| || || ||| | |||| || ||
Sbjct 16145075 GTATTCCAAGCTAAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGT 16145134
Query 164349 GTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTT 164408
||||| ||||| || || |||||||| ||||| || || |||| || || || |
Sbjct 16145135 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCCCTAGTTTGATC 16145194
Query 164409 CGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAA 164468
| ||||||| ||| ||| || || | ||||||| || |||||||| ||||||
Sbjct 16145195 AGGGAAACCATAAAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAA 16145254
Query 164469 ACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCA 164528
|| || || || | |||||||| ||||| ||||| || ||||||||||||| |||
Sbjct 16145255 ACCTATAATATCATAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 16145314
Query 164529 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGG 164588
|||||||| || |||| || || |||||||| ||||| |||||||| || || ||||||
Sbjct 16145315 TTCAACAATTCTTGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGG 16145374
Query 164589 TTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 164648
|| ||| | | ||| | || ||||| |||||| | || ||||| || ||||| ||
Sbjct 16145375 TTTACCACTTTAGGTATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAA 16145434
Query 164649 TCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCT 164708
|| | | ||| ||||||||||||| | || |||||||| || || | ||||||| |
Sbjct 16145435 TCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTT 16145494
Query 164709 GGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCT 164768
|| ||||||||||||||||| || ||||| ||||| || |||||||| ||||| |||
Sbjct 16145495 AACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCT 16145554
Query 164769 GCTGCTGA 164776
|||| |||
Sbjct 16145555 GCTGTTGA 16145562
>seq6
Length=30767194
Score = 105 bits (116), Expect = 7e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 164621 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAA 164680
||| || || ||||| || ||||| || || | | ||| ||||||||||||| | ||
Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610
Query 164681 CACTTGGGCAGACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAA 164740
|||||||| || || | |||| |||| || |||||||| |||||||| || |||||
Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550
Query 164741 CGCTCACAACTTCCCTCTGGATCTCGCTGCTGCTGA 164776
||||| || |||| ||| ||| | ||| ||| |||
Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514
Score = 89.7 bits (98), Expect = 6e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 164442 GGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTT 164501
||||||| || |||||||| |||||||| || || ||||| |||||||| ||||| |||
Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378
Query 164502 GGTCGTCTGATCTTCCAATACGCT 164525
|| || ||||||||||||| |||
Sbjct 12498377 GGCCGATTGATCTTCCAATATGCT 12498354
Score = 86.0 bits (94), Expect = 7e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 164442 GGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTT 164501
||||||| || |||||||| |||||||| || | ||||| |||||||| ||||| |||
Sbjct 12498661 GGTTACATATTCGGTCAAGAGGAAGAAACCTATTATATTGTAGCCGCTCATGGTTATTTT 12498602
Query 164502 GGTCGTCTGATCTTCCAATACGCTTCA 164528
|| || ||||||||||||| ||| ||
Sbjct 12498601 GGCCGATTGATCTTCCAATATGCTACA 12498575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556923463380480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |