Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq192 578 4e-160 seq2 513 2e-140 seq6 91.5 2e-13 >seq192 Length=157790 Score = 578 bits (640), Expect = 4e-160 Identities = 720/984 (73%), Gaps = 2/984 (0%) Strand=Plus/Minus Query 168500 TGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCA 168559 ||| |||| |||||| | ||| | ||||| |||| ||||| ||||| || |||||||| Sbjct 1349 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 1290 Query 168560 TGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACCACCTGTCGA 168618 |||||| || ||| | | ||| || ||| |||| || ||||||||||| || || || Sbjct 1289 ACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGA 1231 Query 168619 TATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTC 168678 ||| || || || | |||||||| | || || || | ||||||||||| || || || Sbjct 1230 TATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTC 1171 Query 168679 AGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGC 168738 ||||| || |||| | || || || ||| | ||||| ||||| || |||||||| Sbjct 1170 TGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGC 1111 Query 168739 AGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTT 168798 ||| | | ||||| |||||||| || ||||||||||| | | | | | ||||| Sbjct 1110 GGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTT 1051 Query 168799 CCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGACTAGGTAT 168858 | || | || | || |||||||||| | |||||||| | | | | || ||||| Sbjct 1050 CTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTAT 991 Query 168859 GAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCCT 168918 | | |||||||| |||||| |||||||| || || | || || ||| || ||| | Sbjct 990 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTT 931 Query 168919 TGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAAC 168978 |||| ||| ||||||| || || ||||| |||||||| |||||||| || || || Sbjct 930 GATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTAC 871 Query 168979 ATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATAT 169038 |||||||||||| | ||||||||||| ||||||||||| |||||||| || || || || Sbjct 870 TTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACAT 811 Query 169039 GGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGT 169098 | ||| ||||| ||| | ||||| || || |||||| || |||||||| || | || Sbjct 810 GTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGT 751 Query 169099 AACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTT 169158 ||| ||| | | ||||| || || || || | |||||| || | ||||||| || Sbjct 750 AACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATT 691 Query 169159 CGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAAT 169218 ||||||||| ||||||||||||||||| || || || ||||| || || || |||| || Sbjct 690 CGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGAT 631 Query 169219 CTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCC 169278 |||||| ||||| ||||||||||| || | | | || ||||||||||| | | || Sbjct 630 CTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCC 571 Query 169279 AGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGG 169338 || ||| || | ||||| ||| || | |||||| | || ||||| |||||||| || || Sbjct 570 TGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGG 511 Query 169339 ATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGA 169398 ||||| || || ||||| || || ||| | | ||| | ||| ||| |||| ||| Sbjct 510 TTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGA 451 Query 169399 CGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTT 169458 | ||||| | || ||||||||||||||||| |||||||| ||||| || || || || Sbjct 450 TATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTT 391 Query 169459 CCCACTAGACTTAGCATCTGCTGA 169482 ||| ||||| |||| ||| ||| Sbjct 390 CCCTCTAGATCTAGCTGCTGTTGA 367 >seq2 Length=30405870 Score = 513 bits (568), Expect = 2e-140 Identities = 708/985 (72%), Gaps = 4/985 (0%) Strand=Plus/Plus Query 168500 TGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCA 168559 ||| |||| |||||| | ||| | ||||| |||| ||||| ||||| || |||||||| Sbjct 16144580 TGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 16144639 Query 168560 TGTTTATTAACAGCAGCAGCATGTT-TCATTGTTGCATTTATTGCTGCACCACCTGTCGA 168618 |||||| || || | | ||| | ||| || | || ||||||||||| || || || Sbjct 16144640 ACTTTATTGACCACAACTTC-TGTACTTATTATTACTTTCATTGCTGCACCTCCAGTAGA 16144698 Query 168619 TATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTC 168678 ||| || || || | ||||||| | || || || | ||||||||||| || || || Sbjct 16144699 TATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTC 16144758 Query 168679 AGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGC 168738 ||||| || |||| | || || || ||| | ||||| ||||| || |||||||| Sbjct 16144759 TGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCGATATGGGAAGC 16144818 Query 168739 AGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTT 168798 ||| | | ||||| |||||||| || ||||||||||| | | | | | ||||| Sbjct 16144819 GGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTT 16144878 Query 168799 CCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGA-ATTATCATACAGACTAGGTA 168857 | | | || | || |||||||||| | ||||||| |||| | | | || |||| Sbjct 16144879 CTCACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAGATTAGTTTCC-GTCTGGGTA 16144937 Query 168858 TGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCC 168917 | | |||||||| |||||| |||||||| || || | || || ||| || ||| Sbjct 16144938 GGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCT 16144997 Query 168918 TTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAA 168977 | |||| ||| ||||||| || || ||||| | ||| | |||||||| || || | Sbjct 16144998 TGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAGGAATCTCCGGTA 16145057 Query 168978 CATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATA 169037 | |||||||||||| | ||||||||||| |||||||||| |||||||| || || || | Sbjct 16145058 CTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATGCACCCATTTCACA 16145117 Query 169038 TGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTG 169097 || ||| | ||| ||| | ||||| || || |||||| || |||||||| || | | Sbjct 16145118 TGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGG 16145177 Query 169098 TAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGT 169157 |||| || | | ||||| || || | | | |||||| || | ||||||| | Sbjct 16145178 TAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAATGAAGGTTACAGAT 16145237 Query 169158 TCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAA 169217 |||||||||| ||||||||||||||||| | || || ||||| || || || |||| | Sbjct 16145238 TCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTATTTTGGCCGATTGA 16145297 Query 169218 TCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCC 169277 ||||||| ||||| ||||||||||| || | | | || ||||||||||| | | | Sbjct 16145298 TCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTTCTTCCTAGCTGCTTGGC 16145357 Query 169278 CAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACG 169337 | || ||| || | ||||| ||| || | |||||| |||| ||||| |||||||| || | Sbjct 16145358 CTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACTATGGCTTTCAACTTAAATG 16145417 Query 169338 GATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTG 169397 | ||||| || || ||||| || || ||| | | ||| | ||| ||| |||| || Sbjct 16145418 GTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTG 16145477 Query 169398 ACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACT 169457 | | ||||| | | ||||||||||||||||| |||||||| ||||| ||||| || | Sbjct 16145478 ATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATT 16145537 Query 169458 TCCCACTAGACTTAGCATCTGCTGA 169482 |||| ||||| |||| ||| ||| Sbjct 16145538 TCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq6 Length=30767194 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 169148 GGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTC 169207 ||||||| ||||||||||| |||||||||||||||||||| || || ||||| || || Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 169208 GGTAGATTAATCTTCCAGTATGC 169230 || |||| |||||||| ||||| Sbjct 12498377 GGCCGATTGATCTTCCAATATGC 12498355 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 169148 GGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTC 169207 ||||||| ||||||||||| |||||||||||| ||||||| || || ||||| || || Sbjct 12498661 GGTTACATATTCGGTCAAGAGGAAGAAACCTATTATATTGTAGCCGCTCATGGTTATTTT 12498602 Query 169208 GGTAGATTAATCTTCCAGTATGC 169230 || |||| |||||||| ||||| Sbjct 12498601 GGCCGATTGATCTTCCAATATGC 12498579 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 169334 AACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGG 169393 || || ||||| || || ||||| || || ||| | | ||| | ||| ||| ||| Sbjct 16007662 AATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGG 16007603 Query 169394 GGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCAC 169453 | ||| | ||||| || |||||||||||||| || |||||||| ||||| ||||| Sbjct 16007602 GCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAATGCTCAT 16007543 Query 169454 AACTTCCCACTAGACTTAGCATCTGCTGA 169482 || |||| ||||| |||| |||| ||| Sbjct 16007542 AATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564440245340160