Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq192 513 2e-140 seq2 439 3e-118 seq1 93.3 5e-14 >seq192 Length=157790 Score = 513 bits (568), Expect = 2e-140 Identities = 701/979 (72%), Gaps = 0/979 (0%) Strand=Plus/Minus Query 171829 TGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTCATGATCCCA 171888 ||| ||||| ||| | ||| | |||| |||| ||||| ||||| | |||||||| Sbjct 1349 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 1290 Query 171889 TGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCTCCTGTCGAT 171948 ||| | || ||| | | || || |||| |||||||| |||||||| || ||| Sbjct 1289 ACTTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGAT 1230 Query 171949 ATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTCT 172008 || || || || | ||||| ||| | || ||||| | ||||| ||||| || || ||| Sbjct 1229 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCT 1170 Query 172009 GGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATCTGGGAAGCA 172068 ||||| || |||| | || || |||||| | ||||| ||||| || |||||||| Sbjct 1169 GGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCG 1110 Query 172069 GCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTCCACTTC 172128 || |||| ||||||||||| ||||| |||||||||||| | | | | | |||||| Sbjct 1109 GCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTC 1050 Query 172129 CTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTATG 172188 | | ||| | | |||||||| | |||||||||| | | | | |||||| Sbjct 1049 TTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 990 Query 172189 AGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCTT 172248 | || ||||| ||| ||||||||||| ||||| |||| || |||||| ||| | Sbjct 989 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTG 930 Query 172249 GTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACG 172308 | |||||| | ||||| || || ||||| |||||||| ||||| ||||| ||||| Sbjct 929 ATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACT 870 Query 172309 TTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATG 172368 |||||||| ||| | || |||||||| ||||| ||||| || ||||| || || |||||| Sbjct 869 TTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATG 810 Query 172369 GCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGTT 172428 ||| ||||| || | || || || || ||||| || ||||| || || || || Sbjct 809 TTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTA 750 Query 172429 ACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTTC 172488 || ||| | | ||||| || || || ||| ||||| || | || |||| ||| Sbjct 749 ACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 690 Query 172489 GGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATC 172548 || ||||| |||||||| || || || ||||| || || ||||| ||||| || | ||| Sbjct 689 GGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATC 630 Query 172549 TTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCCT 172608 ||||| |||||| ||||||||| || | | | || ||||||||||| | || ||| Sbjct 629 TTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCT 570 Query 172609 GTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGT 172668 || ||| || | ||||| ||| || | |||||| | || ||||| |||||| | || ||| Sbjct 569 GTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGT 510 Query 172669 TTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGGGGTGAC 172728 || || ||||| ||||| || || ||| | | ||| | || ||| |||| ||| Sbjct 509 TTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGAT 450 Query 172729 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTC 172788 || ||||| | || ||||| ||||||||||||||||||||| | ||||| || || ||| Sbjct 449 ATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTC 390 Query 172789 CCATTAGACCTTGCTTCTG 172807 || |||| || ||| ||| Sbjct 389 CCTCTAGATCTAGCTGCTG 371 Score = 372 bits (412), Expect = 4e-98 Identities = 708/1043 (68%), Gaps = 31/1043 (3%) Strand=Plus/Plus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| || | || ||||||||| ||| || || ||||| || | || |||||||| Sbjct 34233 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGC 34292 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | |||||||| || | || | || ||||||||| ||| || ||||| Sbjct 34293 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 34352 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || ||||||||||| ||||| | ||| ||| ||| | ||||| ||||| ||| Sbjct 34353 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTA 34412 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGT---CATAGTCTT--CTGTTCCTTT 173185 || || ||||| ||||| || ||| ||| | | | | |||| |||| || | Sbjct 34413 ACCGCCGCAGTTTCCACTCC-GGC----TAATAGTTTAGCGCACTCTTTGTTGTTACTAT 34467 Query 173186 GGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACT 173245 |||| |||||||||||||| || ||||||| ||| | || || || |||| | Sbjct 34468 GGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTT 34527 Query 173246 TTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCG 173305 |||| || |||| || | || ||||| |||||||| ||| | ||||| ||||| | | Sbjct 34528 TTGTTGCTCTACACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTG 34587 Query 173306 CAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCT 173365 | || ||| | ||||||| || ||| |||||||||| | | || || || | Sbjct 34588 CTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTT 34647 Query 173366 TCACTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCAT 173425 | | | || |||| || || ||||| ||| ||||||| || || || | Sbjct 34648 TTGTTTCTGTATTCCTAATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTT 34707 Query 173426 TCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACAT 173485 | ||||| ||||| || ||||| | ||| | || | ||||| || || || |||| Sbjct 34708 TTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACAT 34767 Query 173486 TGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCA 173545 |||| |||||||| |||||||| ||||| || | | || | || | |||| || | Sbjct 34768 TGAACCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTA 34827 Query 173546 TTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTA 173605 |||||||||| || || | || || || | ||||| || ||| ||| Sbjct 34828 TTCATGGTGCTACCGTAGAAAATACTTTATTTGAAG------------ATGGTGATGGT- 34874 Query 173606 AGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTA 173665 | | || ||| | || ||| | || || || | |||||||||||| | Sbjct 34875 --------GCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAA 34926 Query 173666 TGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGAT 173725 || | || || ||| | || ||||| || || ||||| | || ||||| || ||| | | Sbjct 34927 TGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTT 34986 Query 173726 TTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTA 173785 ||||| ||| | ||||| || ||||| || | ||| |||||| | | || Sbjct 34987 GGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTGTGGATGAGTGCTCTTGGAG 35046 Query 173786 TCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAG 173845 | || ||||| || |||||||| | || || ||||| || ||||| || || | |||| Sbjct 35047 TAGTCGGTCTGGCCCTTAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAG 35106 Query 173846 CAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGA 173905 | |||||||| || || |||||||||||||| || ||||| || | || |||||||| Sbjct 35107 CGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTC 35166 Query 173906 GAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGT 173965 | || |||||| | || |||||| || ||||| ||| | |||| || || || || Sbjct 35167 GTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTC 35226 Query 173966 TACCAAGAGGTAACGCACTTTAA 173988 |||| | || ||||| |||||| Sbjct 35227 TACCCCGTGGAAACGCTCTTTAA 35249 >seq2 Length=30405870 Score = 439 bits (486), Expect = 3e-118 Identities = 687/980 (70%), Gaps = 2/980 (0%) Strand=Plus/Plus Query 171829 TGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTCATGATCCCA 171888 ||| ||||| ||| | ||| | |||| |||| ||||| ||||| | |||||||| Sbjct 16144580 TGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 16144639 Query 171889 TGTTTGCTCACAGCAGCAGCA-TGCTTCATCGTTGCATTCATTGCAGCACCTCCTGTCGA 171947 ||| | || || | | | ||| || || | |||||||| |||||||| || || Sbjct 16144640 ACTTTATTGACCACAACTTCTGTACTT-ATTATTACTTTCATTGCTGCACCTCCAGTAGA 16144698 Query 171948 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 172007 ||| || || || | |||| ||| | || ||||| | ||||| ||||| || || || Sbjct 16144699 TATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTC 16144758 Query 172008 TGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATCTGGGAAGC 172067 |||||| || |||| | || || |||||| | ||||| ||||| || |||||||| Sbjct 16144759 TGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCGATATGGGAAGC 16144818 Query 172068 AGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTCCACTT 172127 || |||| ||||||||||| ||||| |||||||||||| | | | | | ||||| Sbjct 16144819 GGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTT 16144878 Query 172128 CCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTAT 172187 | | ||| | | |||||||| | ||||||| | | | | | |||| Sbjct 16144879 CTCACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAGATTAGTTTCCGTCTGGGTAG 16144938 Query 172188 GAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCT 172247 | | || ||||| ||| ||||||||||| ||||| |||| || |||||| ||| | Sbjct 16144939 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTT 16144998 Query 172248 TGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 172307 | |||||| | ||||| || || ||||| | ||| | ||||| ||||| ||||| Sbjct 16144999 GATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAGGAATCTCCGGTAC 16145058 Query 172308 GTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACAT 172367 |||||||| ||| | || |||||||| |||| ||||| || ||||| || || ||||| Sbjct 16145059 TTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATGCACCCATTTCACAT 16145118 Query 172368 GGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGT 172427 | ||| | ||| || | || || || || ||||| || ||||| || || || || Sbjct 16145119 GTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGT 16145178 Query 172428 TACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTT 172487 || || | | ||||| || || | || ||||| || | || |||| || Sbjct 16145179 AACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAATGAAGGTTACAGATT 16145238 Query 172488 CGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTAT 172547 ||| ||||| |||||||| || || || |||| || || ||||| ||||| || | || Sbjct 16145239 CGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTATTTTGGCCGATTGAT 16145298 Query 172548 CTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCC 172607 |||||| |||||| ||||||||| || | | | || ||||||||||| | || || Sbjct 16145299 CTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTTCTTCCTAGCTGCTTGGCC 16145358 Query 172608 TGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGG 172667 ||| ||| || | ||||| ||| || | |||||| |||| ||||| |||||| | || || Sbjct 16145359 TGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACTATGGCTTTCAACTTAAATGG 16145418 Query 172668 TTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGGGGTGA 172727 ||| || ||||| ||||| || || ||| | | ||| | || ||| |||| ||| Sbjct 16145419 TTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGA 16145478 Query 172728 CGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTT 172787 || ||||| | | ||||| ||||||||||||||||||||| | ||||| || || || Sbjct 16145479 TATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTT 16145538 Query 172788 CCCATTAGACCTTGCTTCTG 172807 ||| |||| || ||| ||| Sbjct 16145539 CCCTCTAGATCTAGCTGCTG 16145558 >seq1 Length=47851208 Score = 93.3 bits (102), Expect = 5e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 159664 CAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACAT 159723 ||||| ||||| ||| ||| || ||| || ||||| || ||||| || | || Sbjct 35964201 CAGGTTGGTCTGACAAGCCCAGGTTGGATTGGAGCTGATGTTTGCCATCTCAATCTCCAC 35964260 Query 159724 AAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 || ||||| || ||||||||||||||||| ||||||||| | |||||||||||||| Sbjct 35964261 AAAACATTTTGCATTCCACATGGAGGTGGTGGTCCTGGCATGGGTCCTATTGGTGT 35964316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588049788677120