Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq192 596 2e-165 seq2 504 8e-138 seq3 82.4 9e-11 >seq192 Length=157790 Score = 596 bits (660), Expect = 2e-165 Identities = 735/1002 (73%), Gaps = 2/1002 (0%) Strand=Plus/Plus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 ||||||||| | |||| || ||||||||||| ||||||||||| || | || ||| Sbjct 34245 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTT 34304 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || ||| ||| | ||| | || |||||| | || || || | || || || ||| Sbjct 34305 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 34364 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674 ||||| || || || |||||||||||| |||| ||| ||||| | || || |||||| Sbjct 34365 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTAACCGCCGCAGTT 34424 Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734 ||||| || || | | | || ||| | || | || ||||||||||| |||||| Sbjct 34425 TCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 34484 Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794 || ||||| | ||||||||| | || || || ||| ||||||| || || ||||| Sbjct 34485 GGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTACACGGC 34544 Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTAT 168853 ||||||| ||||| ||||| ||| | ||||| |||||||| || || ||| || | | Sbjct 34545 GCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 34603 Query 168854 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 168913 || || || ||||| || || ||||| ||||| || |||||||||||| || || || Sbjct 34604 GCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCT 34663 Query 168914 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973 || || || || ||||| || |||||||||| || || ||| || || |||| || Sbjct 34664 AATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTAT 34723 Query 168974 CTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATAT 169033 || |||||| | ||||| | ||||| || ||||| |||||| |||| ||||||||||| Sbjct 34724 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 34783 Query 169034 GATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGT 169093 |||||| || || || | ||||| | || || | | || |||||||||| ||| || Sbjct 34784 GATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGT 34843 Query 169094 AGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCAC 169153 ||| |||||| | | | |||||||||| |||||||| ||| || ||| || || Sbjct 34844 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 34903 Query 169154 TCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGG 169213 ||| | || || || ||||||||||| || || ||||| || ||||| || |||||||| Sbjct 34904 TCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGG 34963 Query 169214 TATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 169273 |||| || ||||| | ||||| |||||||||||| | ||||| || || | || Sbjct 34964 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 35023 Query 169274 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 169333 | | |||| ||| | | || | | ||||| || || ||||| ||||| |||||||| Sbjct 35024 TTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTACGTGCCTATGACTT 35083 Query 169334 TGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAA 169393 ||||| || || ||| | ||||| |||||||| || |||||||| ||||||||||| || Sbjct 35084 CGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAA 35143 Query 169394 CATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAA 169453 || ||||| ||||||||| ||||||| ||| | || || ||||| |||||||| || Sbjct 35144 TATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 35203 Query 169454 CTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 | || | ||||||||||| || || ||||| || || || || Sbjct 35204 CCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 35245 Score = 585 bits (648), Expect = 3e-162 Identities = 722/994 (73%), Gaps = 2/994 (0%) Strand=Plus/Minus Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146 |||||| | ||| | ||||||||| | |||||||| || | || ||||| || ||| | Sbjct 1359 CTTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 1300 Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205 |||||||||||| || | | ||||| ||||| || || || || ||| | | ||| | Sbjct 1299 GATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCAC 1241 Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265 |||| || || || |||||||| || ||||| ||| |||| || | | ||||| |||| Sbjct 1240 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACA 1181 Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325 | || || |||||||| || ||||| | ||| ||||| ||| | ||||| || || | Sbjct 1180 ATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGA 1121 Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385 | |||||||| || || | || || ||||| ||||| |||||||||| |||| | | Sbjct 1120 TATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTG 1061 Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445 || | |||||| | |||| | | ||| |||||||||||||||||||| || || Sbjct 1060 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCC 1001 Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505 |||| |||||||| || ||||| ||||||||| || ||||| || || || || ||| Sbjct 1000 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 941 Query 167506 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTA 167565 |||| ||| | | ||||| | |||||||| || ||||||| ||||| || || | Sbjct 940 CTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAA 881 Query 167566 TCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 167625 |||| ||||| ||||||| |||| |||| |||||||| |||||||||||||| ||||||| Sbjct 880 TCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCACC 821 Query 167626 CCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACG 167685 | || || ||| | ||||| ||||| ||||||||||| || || |||||||| ||||| | Sbjct 820 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 761 Query 167686 GTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATG 167745 | || |||| |||||| || | | |||||||| |||| ||| || || | | Sbjct 760 GGTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 701 Query 167746 GTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCG 167805 |||||| |||||||| || ||||| || ||||| ||||| || ||||||||||| || | Sbjct 700 GTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTG 641 Query 167806 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGG 167865 | || ||||||||||||| || |||||||| || || || | || |||||| | | Sbjct 640 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 581 Query 167866 CAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCA 167925 | || |||||||| || |||||||||| |||| Sbjct 580 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCA 521 Query 167926 ACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTA 167985 || | || ||||| || ||||| || ||| | |||||||| ||| || | || Sbjct 520 ACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATA 461 Query 167986 CTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 168045 ||||||| || | | ||||| ||| || ||||||||||||||||| || ||||||| Sbjct 460 CTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 401 Query 168046 CTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 168079 | || || |||||||| || || ||||||| ||| Sbjct 400 CCCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 367 >seq2 Length=30405870 Score = 504 bits (558), Expect = 8e-138 Identities = 709/1002 (71%), Gaps = 2/1002 (0%) Strand=Plus/Plus Query 167079 TGGGAATCCTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTC 167138 |||| | |||||| | ||| | ||||||||| | ||| |||| || | || ||||| Sbjct 16144562 TGGGGTTGCTTTTGTAACTGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTT 16144621 Query 167139 GGCGTTCTGATGATCCCTACGTTGCTTGCAGCAACCATCTGTT-TCATCATCGCCTTCGT 167197 || ||| ||||||||||||| || | | |||| ||||| | || || | ||| | Sbjct 16144622 GGTGTTTTGATGATCCCTACTTTATTGACCACAACT-TCTGTACTTATTATTACTTTCAT 16144680 Query 167198 CGGTGCTCCTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTA 167257 | ||| ||||| || || || |||||||| || |||| ||| |||| || | | || Sbjct 16144681 TGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTA 16144740 Query 167258 TGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTT 167317 ||| ||||| || || |||||||| || ||||| | ||| ||||| ||| | ||||| Sbjct 16144741 TGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTT 16144800 Query 167318 CTATCCCATCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCA 167377 || || || |||||||| || || | || || ||||| ||||| |||||||||| | Sbjct 16144801 TTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGA 16144860 Query 167378 ACTCGTAGTTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACT 167437 ||| | ||| | |||||| |||| | | ||| ||||||||||||||||| | Sbjct 16144861 ACTAATTGTTCTACACTTCTCACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAGAT 16144920 Query 167438 CTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGC 167497 || |||||| |||| ||| || ||||| ||||||||| || ||||| || || || Sbjct 16144921 TAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGC 16144980 Query 167498 AGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCC 167557 || ||||||| ||| | | ||||| | |||||||| || ||||||| ||| | Sbjct 16144981 TGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTC 16145040 Query 167558 TCTTGGTATCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCT 167617 || || ||||| ||||| ||||||| |||| |||| |||||||| ||||||||||||| Sbjct 16145041 CCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCT 16145100 Query 167618 GATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGC 167677 |||||||| || || ||| | |||| || || ||||||||||| || || |||||||| Sbjct 16145101 TATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGC 16145160 Query 167678 AATGCACGGTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCA 167737 ||||| || || |||| ||| || || | | ||||||| ||| ||| || Sbjct 16145161 TATGCATGGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGC 16145220 Query 167738 GAACTATGGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGG 167797 || | ||||||| |||||||| || ||||| || ||||| ||| | || |||||||| Sbjct 16145221 TAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGG 16145280 Query 167798 TTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTT 167857 ||| || || || ||||||||||||| || |||||||| || | || | || || Sbjct 16145281 TTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTT 16145340 Query 167858 CTTCTTGGCAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNN 167917 |||| | || || |||||||| || |||||||||| Sbjct 16145341 CTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACTAT 16145400 Query 167918 NNNATTCAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGT 167977 |||||| | || ||||| || ||||| || ||| | |||||||| ||| || Sbjct 16145401 GGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGT 16145460 Query 167978 TCTGCCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGA 168037 | ||||||||| || | | ||||| | | || ||||||||||||||||| || Sbjct 16145461 AATTAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGA 16145520 Query 168038 GCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 168079 ||||||||||| || |||||||| || || ||||||| ||| Sbjct 16145521 ACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq3 Length=27368013 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 4/128 (3%) Strand=Plus/Plus Query 169353 GCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGT 169412 |||| |||||||| || ||| | || || |||||||| || || |||| ||||||||| Sbjct 18684803 GCAGTGGAAGATCCTGAATTTTAAACTTTTTACACCAAAAATATTATCTTAAACGAAGGT 18684862 Query 169413 CTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAA 169472 ||||||| || | || ||||| |||||| | ||| || | ||||||||||| Sbjct 18684863 ATTCGTGCTTGA----CGGCTCAAGATCAGCCTCATAAAAACCTTATATTCCCTGAGGAG 18684918 Query 169473 GTACTTCC 169480 || ||||| Sbjct 18684919 GTTCTTCC 18684926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560606654540800