Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq192 493 2e-134 seq2 412 5e-110 >seq192 Length=157790 Score = 493 bits (546), Expect = 2e-134 Identities = 705/993 (71%), Gaps = 0/993 (0%) Strand=Plus/Minus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 |||||| | ||| | || ||||| || ||| | ||| |||| ||||||||||| | Sbjct 1358 TTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1299 Query 215354 ATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCT 215413 ||||| ||| | | | || || || || || | || ||||| ||||||||| Sbjct 1298 ATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCACCT 1239 Query 215414 CCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAAC 215473 || || ||||| || || || | || || ||| |||| |||||| | ||||| ||||| Sbjct 1238 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAAT 1179 Query 215474 ATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATC 215533 || || |||||||| || | |||| || || || || || ||||| ||||| || Sbjct 1178 ATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGATA 1119 Query 215534 TGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATC 215593 |||||||| || | ||||| |||||| | ||||| ||||| |||| |||| || | Sbjct 1118 TGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTT 1059 Query 215594 TTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGA 215653 | |||||| | ||||| | || ||| || | ||||||||||| || | | Sbjct 1058 CTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 999 Query 215654 TTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCA 215713 | |||||| | |||||||| |||||| || || || ||||| | ||||| ||| Sbjct 998 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 939 Query 215714 GTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATC 215773 || ||| | | |||||| | ||||| || || ||||| | |||||| || |||||| Sbjct 938 GTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATC 879 Query 215774 TCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCA 215833 || || || ||||||| |||| |||| ||||| || ||||||||||| || ||||||||| Sbjct 878 TCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCACCCA 819 Query 215834 TTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGT 215893 || ||||||||||| || |||||||| ||||| || || | ||| ||| ||||| || Sbjct 818 TTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGG 759 Query 215894 TCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGT 215953 || | || || ||| | | ||||| || || || || | |||||| || | ||| Sbjct 758 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 699 Query 215954 TACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGT 216013 |||| ||||| |||||||| ||||| || || |||||||| || || ||||| ||||| Sbjct 698 TACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGC 639 Query 216014 CGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCA 216073 || | ||||||||||| || ||||||||| || | | | || |||||||| || Sbjct 638 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCT 579 Query 216074 GCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAAC 216133 || | ||||| | |||||||| || || | ||| || |||||||| |||||| Sbjct 578 GCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAAC 519 Query 216134 CTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACT 216193 | || ||||| || ||||| || ||||| || || ||| || ||| |||| Sbjct 518 TTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACT 459 Query 216194 TGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCT 216253 ||||| || || ||||| | || |||||||||||||| ||||| || ||||| || Sbjct 458 TGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCC 399 Query 216254 CACAACTTCCCATTAGACTTGGCTGCTGCTGAA 216286 || || ||||| |||| | ||||||| |||| Sbjct 398 CATAATTTCCCTCTAGATCTAGCTGCTGTTGAA 366 >seq2 Length=30405870 Score = 412 bits (456), Expect = 5e-110 Identities = 693/997 (70%), Gaps = 8/997 (1%) Strand=Plus/Plus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 |||||| | ||| | || ||||| || || | ||| |||| ||||||||||| | Sbjct 16144571 TTTTGTAACTGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTG 16144630 Query 215354 ATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTC---ATCGTAGCATTCATCGCTGCA 215410 ||||| ||| | | | | | || |||| | | || | | ||||| |||||| Sbjct 16144631 ATGATCCCTA-CTTTATTGA--CCACAACTTCTGTACTTATTATTACTTTCATTGCTGCA 16144687 Query 215411 CCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAAC 215470 ||||| || ||||| || || || | | || ||| |||| |||||| | ||||| ||| Sbjct 16144688 CCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAAC 16144747 Query 215471 AACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCT 215530 || || || |||||||| || | |||| || || || || | ||||| ||||| Sbjct 16144748 AATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCG 16144807 Query 215531 ATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTT 215590 || |||||||| || | ||||| |||||| | ||||| ||||| |||| |||| || Sbjct 16144808 ATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATT 16144867 Query 215591 ATCTTCCACTTCCTCA-TTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTA 215649 | | |||||| ||| ||||| | || ||| || | ||||||| || || Sbjct 16144868 GTTCTACACTTC-TCACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAGATTAGTTT 16144926 Query 215650 CAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTT 215709 | | | |||| | | |||||||| |||||| || || || ||||| | ||||| Sbjct 16144927 CCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 16144986 Query 215710 TGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGG 215769 ||| || ||| | | |||||| | ||||| || || ||||| | ||| | || || Sbjct 16144987 TGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAGG 16145046 Query 215770 AATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCA 215829 |||||| || || ||||||| |||| |||| ||||| ||| |||||||||| || ||||| Sbjct 16145047 AATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATGCA 16145106 Query 215830 CCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCA 215889 |||||| ||||||||||| | || ||||| ||||| || || | ||| ||| ||||| Sbjct 16145107 CCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 16145166 Query 215890 CGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTA 215949 || || | || || || | | ||||| || || | | | |||||| || | Sbjct 16145167 TGGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAATGA 16145226 Query 215950 CGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTT 216009 ||||||| ||||| |||||||| ||||| || || ||| |||| || || ||||| || Sbjct 16145227 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTATTT 16145286 Query 216010 TGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCT 216069 ||| || | ||||||||||| || ||||||||| || | | | || |||||||| Sbjct 16145287 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTTCTTCCT 16145346 Query 216070 TGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTT 216129 || || | ||||| | |||||||| || | | ||| || |||||||| || Sbjct 16145347 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACTATGGCTTT 16145406 Query 216130 CAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCC 216189 |||| | || ||||| || ||||| || ||||| || || ||| || ||| Sbjct 16145407 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16145466 Query 216190 TACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAA 216249 ||||||||| || || ||||| | | |||||||||||||| ||||| || ||||| Sbjct 16145467 TACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACGTAA 16145526 Query 216250 CGCTCACAACTTCCCATTAGACTTGGCTGCTGCTGAA 216286 ||||| || ||||| |||| | ||||||| |||| Sbjct 16145527 TGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGAA 16145563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745079811804160