Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq192 650 0.0 seq2 571 7e-158 seq6 120 4e-22 seq3 93.3 5e-14 >seq192 Length=157790 Score = 650 bits (720), Expect = 0.0 Identities = 729/969 (75%), Gaps = 8/969 (1%) Strand=Plus/Minus Query 181821 AATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACC 181880 || ||||| || | || ||||||||||| |||||||||| ||| | ||| | ||||| Sbjct 1331 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1272 Query 181881 ATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGCGA 181939 ||||| || || |||||||| | || |||||||| || ||||| || ||||| || || Sbjct 1271 -TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGA 1213 Query 181940 ACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATC 181999 ||| || |||| || | | ||||| ||||| || || |||||||| || | || | Sbjct 1212 ACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1153 Query 182000 CTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTG 182059 ||| || || ||| | ||||| ||||| || |||||||| || || ||||||| || Sbjct 1152 CTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 1093 Query 182060 GCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGC 182119 | | || ||||||||||||| |||| ||||| | |||||| | | || | || || Sbjct 1092 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGG--TGTA-GC 1036 Query 182120 ---CTACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTG 182176 ||||||||| ||||||||||||||| || ||| | |||||||| || ||||| Sbjct 1035 TTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGC 976 Query 182177 TGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGG 182236 ||| ||||| || ||||| || || || || ||||||| ||||| | ||||| | || Sbjct 975 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGG 916 Query 182237 TCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTT 182296 |||||| || || || | |||||||| |||||||| || || ||||||| ||| | Sbjct 915 TCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGAT 856 Query 182297 GGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGG 182356 || |||||||| ||||||||||| |||||||| || || |||||||| || ||||| || Sbjct 855 TGTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGG 796 Query 182357 TGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGT 182416 ||||||||| || || || || ||||| ||||| || || ||||| || ||| | | Sbjct 795 TGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGTTTGAT 736 Query 182417 CCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGA 182476 | | || || || || | || || || | ||||||| ||||||||||| ||||| Sbjct 735 CAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGA 676 Query 182477 GACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATC 182536 |||||||| ||||| || || ||||| || || || || |||||||||||||| || Sbjct 675 AACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 616 Query 182537 ATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTG 182596 |||||||| || ||||| || || |||||||| ||||| |||||||| || || ||||| Sbjct 615 TTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 556 Query 182597 GTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCA 182656 ||| ||||| | ||| || ||| ||||| |||||| | || ||||| || ||||| || Sbjct 555 GTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCA 496 Query 182657 GTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGC 182716 || | ||||| ||||||||||||| |||| |||||||| ||| | | ||||| || Sbjct 495 ATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGC 436 Query 182717 TGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGC 182776 | ||||||||||||||||||||||| ||||| || || || ||||| |||||||| || Sbjct 435 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATCTAGC 376 Query 182777 TGCTGCTGA 182785 ||||| ||| Sbjct 375 TGCTGTTGA 367 Score = 560 bits (620), Expect = 1e-154 Identities = 732/1010 (72%), Gaps = 6/1010 (1%) Strand=Plus/Plus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 ||||||||| | | || ||||| || ||||| || |||||||| || | || || Sbjct 34245 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTT 34304 Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312 || ||| ||| | || | || |||||| | || || ||| | ||||| || ||| Sbjct 34305 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 34364 Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTC 183372 |||||||||||| | || ||||||| | ||||| |||||| | || || || || Sbjct 34365 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTAACCGCCGCAGTT 34424 Query 183373 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCAA 183432 || || || ||| | | | | || ||| | ||||||| ||||||||||| | ||| Sbjct 34425 TCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 34484 Query 183433 GGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGT 183492 || || ||| || ||||| ||| | || || || |||| |||||| || || ||||| Sbjct 34485 GGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTACACGGC 34544 Query 183493 GCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATC 183552 || || | || || ||||| ||| | || || |||||||||||||| | || | Sbjct 34545 GCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTG 34604 Query 183553 CGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTT 183612 || ||||| ||||| || || ||||| ||||| |||||||||||||| ||||||||| Sbjct 34605 CGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTA 34664 Query 183613 ATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATC 183672 || ||||| || ||||||||| ||||| ||||| || ||||| || |||||||| || Sbjct 34665 ATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTATA 34724 Query 183673 TTTAGAT---TCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCAT 183729 ||| ||| |||| || |||| ||||||| || || ||||| || ||||| || ||| Sbjct 34725 TTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATTTCAT 34781 Query 183730 ATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACA 183789 ||||||||||||||||| | | || | || || | | ||||| ||||||| || Sbjct 34782 ATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACC 34841 Query 183790 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCC 183849 ||||| ||||| || | ||||||||| || ||||| |||||| || ||| | | Sbjct 34842 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 34901 Query 183850 ACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTC 183909 ||||||| ||||| || ||||| ||||| || || || || || ||||| |||||||| Sbjct 34902 ACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTT 34961 Query 183910 GGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATG 183969 |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || | Sbjct 34962 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 35021 Query 183970 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGAT 184029 ||| | ||| | | || |||| | | || || || ||||| || ||||| ||||| Sbjct 35022 GGTTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTACGTGCCTATGAC 35081 Query 184030 TTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAG 184089 || || ||| || ||| | ||||| |||||||| ||||||||||| |||||||| || Sbjct 35082 TTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 35141 Query 184090 AACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAG 184149 || || || | || ||||| | ||||| ||| | || || ||||| || ||||| Sbjct 35142 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 35201 Query 184150 AATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 || ||||||| || |||||||| |||| | || || ||||||| ||| Sbjct 35202 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATG 35251 >seq2 Length=30405870 Score = 571 bits (632), Expect = 7e-158 Identities = 709/965 (73%), Gaps = 8/965 (1%) Strand=Plus/Plus Query 181825 GTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACCATCT 181884 |||| || | || ||||||||||| |||||||||| ||| | ||| | |||| ||| Sbjct 16144602 GTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCACAACT-TCT 16144660 Query 181885 GTT-TCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGCGAACCC 181943 || | || || ||||| | || |||||||| || ||||| || ||||| || |||| Sbjct 16144661 GTACTTATTATTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCT 16144720 Query 181944 GTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATCCTCC 182003 || |||| || | | ||||| ||||| || || |||||||| || | || |||| Sbjct 16144721 GTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCT 16144780 Query 182004 AACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTGGCTG 182063 || || ||| | ||||| ||||| || |||||||| || || ||||||| ||| | Sbjct 16144781 GCAGCTATAGGTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTA 16144840 Query 182064 TATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGC---C 182120 || ||||||||||||| |||| ||||| | |||||| | || | || || | Sbjct 16144841 TACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTCACTTGG--TGTA-GCTTGC 16144897 Query 182121 TACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGTGTA 182180 |||||||| ||||||||||| || || ||| | |||| ||| || ||||| ||| Sbjct 16144898 TACATGGGTCGTGAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTT 16144957 Query 182181 GCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGGTCAA 182240 ||||| || ||||| || || || || ||||||| ||||| | ||||| | |||||| Sbjct 16144958 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAA 16145017 Query 182241 GGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTGGTT 182300 || || || || | |||| |||| |||||||| || || ||||||| ||| | || Sbjct 16145018 GGAAGCTTTTCTGACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTA 16145077 Query 182301 TTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTA 182360 ||||||||| |||||||||| |||||||| || || |||||||| || | ||| |||||| Sbjct 16145078 TTCCAAGCTAAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTA 16145137 Query 182361 TTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGT 182420 ||||| || || || || ||||| ||||| || || ||||| || || | || | Sbjct 16145138 TTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCCCTAGTTTGATCAGG 16145197 Query 182421 GAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 182480 || || | | | || || || | ||||||| ||||||||||| ||||| ||| Sbjct 16145198 GAAACCATAAAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACC 16145257 Query 182481 TATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATTC 182540 ||||| ||| | || || ||||| || || || || |||||||||||||| || ||| Sbjct 16145258 TATAATATCATAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 16145317 Query 182541 AACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTC 182600 ||||| || |||| || || |||||||| ||||| |||||||| || || |||||||| Sbjct 16145318 AACAATTCTTGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTT 16145377 Query 182601 ACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCC 182660 ||| | | ||| || || ||||| |||||| | || ||||| || ||||| || || Sbjct 16145378 ACCACTTTAGGTATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCT 16145437 Query 182661 ATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGGT 182720 | ||||| ||||||||||||| |||| |||||||| ||| | | ||||| | | Sbjct 16145438 GTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAAC 16145497 Query 182721 CTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGCTGCT 182780 ||||||||||||||||||||||| ||||| || || || ||||| |||||||| |||||| Sbjct 16145498 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCT 16145557 Query 182781 GCTGA 182785 | ||| Sbjct 16145558 GTTGA 16145562 >seq6 Length=30767194 Score = 120 bits (132), Expect = 4e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 182630 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAA 182689 ||| ||||| ||||| || ||||| || || | ||||| ||||||||||||| |||| Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 182690 CACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAA 182749 |||||||| ||| | | |||| ||| ||||||||||| ||||||||||| ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 182750 CGCACACAACTTCCCACTAGATCTTGCTGCTGCTGA 182785 || || || |||| |||||| | ||| ||| ||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 182451 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTC 182510 ||||||| ||||||||||| ||||| |||||||| || || || || ||||| || || Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 182511 GGTCGTTTGATCTTCCAATACGC 182533 || || |||||||||||||| || Sbjct 12498377 GGCCGATTGATCTTCCAATATGC 12498355 >seq3 Length=27368013 Score = 93.3 bits (102), Expect = 5e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 183576 CTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTC 183635 ||| ||||| |||||||||||||| ||||||||| || |||||||| |||||| | Sbjct 2926991 CTCCGGTCCAATTGCTGTTTTTGTTTATGTATTCCTAATTTATCCACTAAGTCAGTTTGG 2927050 Query 183636 ATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTC 183681 ||||| ||||| || | ||| || |||||||| || ||| ||||| Sbjct 2927051 TTGGTTTTTTGCGCCCAATTTTGGTGTAGCAGCTATATTTTGATTC 2927096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611694531929600