Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq192 627 1e-174 seq2 542 3e-149 seq6 86.0 7e-12 >seq192 Length=157790 Score = 627 bits (694), Expect = 1e-174 Identities = 720/964 (75%), Gaps = 6/964 (1%) Strand=Plus/Minus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850 ||||||||||| | || ||||| |||||| | |||||||| ||| | |||| || Sbjct 1331 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1272 Query 164851 ATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGA 164909 | ||| ||||||| ||| ||||| ||||| || || || || ||||||||||||||||| Sbjct 1271 -TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGA 1213 Query 164910 ACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTC 164969 |||||| | || ||| || | || || ||||| || || |||||||| | |||| | Sbjct 1212 ACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1153 Query 164970 TTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATG 165029 ||| || || || | ||||| || || || |||||||| || || | |||||||| Sbjct 1152 CTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 1093 Query 165030 GTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTG 165089 ||| ||||||||||||||||| | | |||| | |||||| | | ||||||||||| Sbjct 1092 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 1033 Query 165090 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGT 165149 |||||||||||||||||||||||| || ||| || |||||||| ||||||||| || Sbjct 1032 CTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 973 Query 165150 AGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGTCA 165209 |||||| || ||||| || |||||| | || |||||| || | ||||| | ||||| Sbjct 972 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCA 913 Query 165210 AGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGT 165269 ||| || || ||||| |||||||| || || ||||| |||||||| |||| ||| | || Sbjct 912 AGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGT 853 Query 165270 CTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGT 165329 |||||||| || || ||||| |||||||| || || |||||| | ||||| ||||| || Sbjct 852 ATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 793 Query 165330 ATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTC--TTGTTACTTCCTCACTCGTC 165387 |||||| || || || ||| |||||||||||| ||| | || || || | || Sbjct 792 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGG--GTCCTTGGTAACCTCTAGTTTGATC 735 Query 165388 CGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAAGAG 165447 | || || || |||| || | || | ||||| | || || ||||| ||||| Sbjct 734 AGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAA 675 Query 165448 ACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCATCC 165507 |||||||| ||||| || || || || || || || || | || |||||||| || Sbjct 674 ACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 615 Query 165508 TTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGG 165567 ||||||||||| ||||| | || |||||||| || || ||||||||||| ||||||||| Sbjct 614 TTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGG 555 Query 165568 TTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 165627 || || ||| | ||| | ||||| ||||| |||||| | || ||||| || ||||| || Sbjct 554 TTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAA 495 Query 165628 TCTATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACGTTCTGAACCGTGCT 165687 ||| | |||||||||||| | || |||||||||||| || | ||||| ||| Sbjct 494 TCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGCT 435 Query 165688 GGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCTCGACCTCGCT 165747 || |||||||||||||||||||| ||||| || || || ||||| || || || ||| Sbjct 434 AACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATCTAGCT 375 Query 165748 GCTG 165751 |||| Sbjct 374 GCTG 371 Score = 567 bits (628), Expect = 8e-157 Identities = 720/988 (73%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || || ||||||||||| ||||||||||| || | || |||| ||| ||| | ||| Sbjct 34263 GACCGCTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 34322 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| |||| || || || || || || |||||||| |||||| | ||| Sbjct 34323 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCA 34382 Query 166311 AGCAGTTATCTGGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCT 166370 || ||| |||| || ||||| | || || |||||||| ||||| || || | Sbjct 34383 AGTTCCTATTTGGAAGGCTGTAACTTCTTAACCGCCGCAGTTTCCACTCCGGCTAATAGT 34442 Query 166371 ATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGG 166430 | | || ||| | | | || ||||||||||| || ||||| ||||| | ||| Sbjct 34443 TTAGCGCACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 34502 Query 166431 TGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGT 166490 || ||| | || || || ||| | ||||||||||| ||||| ||||| | ||||| ||| Sbjct 34503 TGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTACACGGCGCTTTCGGACTAATAGGT 34562 Query 166491 TTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAAT 166549 || ||| | || || |||||| | ||||| ||| | | | || || || |||||||| Sbjct 34563 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAAT 34621 Query 166550 CGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCA 166609 ||| || || ||||| |||||||| || ||| ||| || || || || || || ||||| Sbjct 34622 CGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTAATTTATCCGCTAGGTCA 34681 Query 166610 ATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTT 166669 || |||||||||| || || ||| || || |||| || || |||||| |||| || Sbjct 34682 GTCTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTT 34741 Query 166670 CCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTAT 166729 | ||||| || || || |||||| |||||||||||||||||||||| || || || | Sbjct 34742 TTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTGGGGT 34801 Query 166730 TCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCA 166789 | || | ||| || | | || || ||||||| ||| ||||| || ||| | | | | Sbjct 34802 GTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATTTGA 34861 Query 166790 AGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTA 166849 ||||||||| |||||||| ||| || || || | ||||||| |||||||| || Sbjct 34862 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTA 34921 Query 166850 TTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAA 166909 ||||||||| || || ||||||| |||||| || ||||| || |||| ||| ||||| Sbjct 34922 TTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAA 34981 Query 166910 GAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCAT 166969 | ||||| |||||||||||| | ||||| || || | ||| |||||| ||| | | Sbjct 34982 ACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTGTGGATGAGTGCTCT 35041 Query 166970 CGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAG 167029 || | | ||||| || || ||||| ||||| |||||||| ||||| || ||| | | Sbjct 35042 TGGAGTAGTCGGTCTGGCCCTTAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCG 35101 Query 167030 GGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGG 167089 ||||| || |||||||| ||||| || ||||| ||||| || |||||||| || || || Sbjct 35102 TGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGG 35161 Query 167090 TATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGA 167149 ||| ||| |||||||||| || ||||| |||||||| | | |||||||||| || Sbjct 35162 TATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 35221 Query 167150 GGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 |||||| || | || |||||||| ||| Sbjct 35222 GGTTCTACCCCGTGGAAACGCTCTTTAA 35249 >seq2 Length=30405870 Score = 542 bits (600), Expect = 3e-149 Identities = 707/967 (73%), Gaps = 12/967 (1%) Strand=Plus/Plus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850 ||| ||||||| | || ||||| |||||| | |||||||| ||| | || | || Sbjct 16144598 AACTGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCACAACT 16144657 Query 164851 ATTTGTT-TTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGA 164909 | ||| |||||| | | ||||| ||||| || || || || ||||||||||||||| | Sbjct 16144658 -TCTGTACTTATTATTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAA 16144716 Query 164910 ACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTC 164969 |||||| | || ||| || | || || ||||| || || |||||||| | |||| | Sbjct 16144717 ACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 16144776 Query 164970 TTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATG 165029 ||| || || || | ||||| || || || |||||||| || || | |||||||| Sbjct 16144777 CTCTGCAGCTATAGGTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 16144836 Query 165030 GTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCA-TCGGTGTAGCTT 165088 ||| ||||||||||||||||| | | |||| | ||||| |||| | |||||||||| Sbjct 16144837 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTT-CTCACTTGGTGTAGCTT 16144895 Query 165089 GCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCG 165148 |||||||||||||||||||||| | || ||| || |||| ||| ||||||||| | Sbjct 16144896 GCTACATGGGTCGTGAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTG 16144955 Query 165149 TAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGTC 165208 | |||||| || ||||| || |||||| | || |||||| || | ||||| | |||| Sbjct 16144956 TTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTC 16145015 Query 165209 AAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCG 165268 |||| || || ||||| | ||| | || || ||||| |||||||| |||| ||| | | Sbjct 16145016 AAGGAAGCTTTTCTGACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTG 16145075 Query 165269 TCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGG 165328 | |||||||| | || ||||| |||||||| || || |||||| | |||| || || | Sbjct 16145076 TATTCCAAGCTAAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTG 16145135 Query 165329 TATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGT-CTTGTTACTTCCTCACTCG-T 165386 ||||||| || || || ||| |||||||||||| || |||| || ||| | | | Sbjct 16145136 TATTCGGCGGCTCCCTATTCAGTGCTATGCATGG--GTCCTTGGTAACCCCTAGTTTGAT 16145193 Query 165387 CCGCGAGACAACTGAAACAGAGAGTCAG--AACTACGGTTATAAGTTTGGACAAGAAGAA 165444 | | || || | ||| | || || | || | ||||| | || || ||||| ||| Sbjct 16145194 CAGGGAAAC--CATAAAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAA 16145251 Query 165445 GAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCA 165504 || |||||||| ||| | || || || || || || || || | || |||||||| || Sbjct 16145252 GAAACCTATAATATCATAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCT 16145311 Query 165505 TCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATC 165564 ||||||||||| |||| | || |||||||| || || ||||||||||| |||||| Sbjct 16145312 AGTTTCAACAATTCTTGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 16145371 Query 165565 TGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAAC 165624 ||||| || || | ||| | || || ||||| |||||| | || ||||| || ||||| Sbjct 16145372 TGGTTTACCACTTTAGGTATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAAT 16145431 Query 165625 CAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACGTTCTGAACCGT 165684 || ||| | |||||||||||| | || |||||||||||| || | ||||| Sbjct 16145432 CAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGC 16145491 Query 165685 GCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCTCGACCTC 165744 | | || |||||||||||||||||||| ||||| ||||| || ||||| || || || Sbjct 16145492 GTTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTA 16145551 Query 165745 GCTGCTG 165751 ||||||| Sbjct 16145552 GCTGCTG 16145558 >seq6 Length=30767194 Score = 86.0 bits (94), Expect = 7e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 165600 CAACCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCC 165659 ||| || || ||||| || ||||| || ||| | |||||||||||| | || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 165660 TACTTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAA 165719 |||||||||||| || | |||| ||| || |||||||| ||||||||||| ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 165720 CGCTCACAACTTCCCCCTCGACCTCGCTGCTG 165751 ||||| || |||| || || | ||| ||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTG 16007518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563659447214080