Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq192 551 6e-152 seq2 462 3e-125 seq6 82.4 9e-11 >seq192 Length=157790 Score = 551 bits (610), Expect = 6e-152 Identities = 703/968 (73%), Gaps = 0/968 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || |||| ||||| ||||| ||||||||||| Sbjct 1349 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 1290 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 | |||| | ||| | | ||||| |||||||||| || || || || || || Sbjct 1289 ACTTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGAT 1230 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | |||||||| | || || || | ||||| ||||| || || ||| Sbjct 1229 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCT 1170 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| | || || || ||| | ||||| || || || |||||||| Sbjct 1169 GGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCG 1110 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 || | | ||||| ||||| || ||||||||||||||| || || || | | |||||| Sbjct 1109 GCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTC 1050 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || |||||||||| | |||||||||| | |||| | |||||| Sbjct 1049 TTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 990 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| |||||||| ||||| || |||| || ||||| ||||| Sbjct 989 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTG 930 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | ||||| | ||||| ||| || || ||||| ||||| ||||| ||||| ||||| Sbjct 929 ATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACT 870 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||||||| | ||||||||||| ||||||||||| |||||||||||||| || ||| Sbjct 869 TTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATG 810 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || ||| || ||||| || || | ||| Sbjct 809 TTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTA 750 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || ||||| || || || || | || |||| |||| Sbjct 749 ACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 690 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || || || || || ||||| || ||||| || | ||| Sbjct 689 GGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATC 630 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || |||||| |||| | | || |||||||| ||| | | ||| Sbjct 629 TTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCT 570 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| || | | ||||| |||| ||||| || ||| | ||||| Sbjct 569 GTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGT 510 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 ||||| ||||| || || | || ||| | ||| ||| || ||| ||||| || Sbjct 509 TTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGAT 450 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 || ||||| | || ||||| ||||||||||| |||||||| |||||||| || || ||| Sbjct 449 ATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTC 390 Query 170659 CCACTTGA 170666 || || || Sbjct 389 CCTCTAGA 382 >seq2 Length=30405870 Score = 462 bits (512), Expect = 3e-125 Identities = 688/971 (71%), Gaps = 6/971 (1%) Strand=Plus/Plus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||| | | || |||| ||||| ||||| ||||||||||| Sbjct 16144580 TGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 16144639 Query 169759 TGTCTATTAGCAGCAGCAAC--CTGCT-TTATCGTTGCTTTCATCGCAGCTCCACCTGTG 169815 | |||| | || |||| ||| |||| || ||||||| || || || || || Sbjct 16144640 ACTTTATTGAC--CA-CAACTTCTGTACTTATTATTACTTTCATTGCTGCACCTCCAGTA 16144696 Query 169816 GACATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATC 169875 || || ||||| || | ||||||| | || || || | ||||| ||||| || || Sbjct 16144697 GATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATT 16144756 Query 169876 TCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAA 169935 |||||||| || |||| | || || || ||| | ||||| || || || |||||| Sbjct 16144757 TCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCGATATGGGAA 16144816 Query 169936 GCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCAC 169995 || || | | ||||| ||||| || ||||||||||||||| || || || | | ||| Sbjct 16144817 GCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACAC 16144876 Query 169996 TTCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGT 170055 ||| | || | || |||||||||| | ||||||| | | |||| | ||| Sbjct 16144877 TTCTCACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAGATTAGTTTCCGTCTGGGT 16144936 Query 170056 ATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTC 170115 | ||| |||||||| ||| |||||||| ||||| || |||| || ||||| ||| Sbjct 16144937 AGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTC 16144996 Query 170116 TTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGT 170175 || | ||||| | ||||| ||| || || |||| |||| | ||||| ||||| ||| Sbjct 16144997 TTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAGGAATCTCCGGT 16145056 Query 170176 ACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCAT 170235 || || ||||||||| | ||||||||||| |||||||||| |||||||||||||| || Sbjct 16145057 ACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATGCACCCATTTCAC 16145116 Query 170236 ATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTT 170295 ||| ||| | || ||| | ||||| || | || ||| || ||||| || || | Sbjct 16145117 ATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTG 16145176 Query 170296 GTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAA 170355 ||||| || | | ||||| || || | | | || || || || | || |||| | Sbjct 16145177 GTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAATGAAGGTTACAGA 16145236 Query 170356 TTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTT 170415 ||||| ||||| |||||||| || || || | || || ||||| || ||||| || | Sbjct 16145237 TTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTATTTTGGCCGATTG 16145296 Query 170416 ATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTC 170475 ||||||||||||||||| || |||||| | || | | || |||||||| ||| | | Sbjct 16145297 ATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTTCTTCCTAGCTGCTTGG 16145356 Query 170476 CCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAAT 170535 ||||||||| | |||||||| || | | ||||| | || ||||| || ||| | ||| Sbjct 16145357 CCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACTATGGCTTTCAACTTAAAT 16145416 Query 170536 GGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCA 170595 || ||||| ||||| || || | || ||| | ||| ||| || ||| ||||| Sbjct 16145417 GGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCT 16145476 Query 170596 GACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAAC 170655 || || ||||| | | ||||| ||||||||||| |||||||| |||||||| || || Sbjct 16145477 GATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAAT 16145536 Query 170656 TTCCCACTTGA 170666 ||||| || || Sbjct 16145537 TTCCCTCTAGA 16145547 >seq6 Length=30767194 Score = 82.4 bits (90), Expect = 9e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 170347 GGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTT 170406 || |||| |||||| ||||| |||||||| || || ||||| || || ||||| || ||| Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 170407 GGTAGACTTATCTTCCAATATGCTA 170431 || || | |||||||||||||||| Sbjct 12498377 GGCCGATTGATCTTCCAATATGCTA 12498353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582846601164800