Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 4e-15 seq8 95.1 1e-14 >seq6 Length=30767194 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419 || |||||||| | ||| | || |||| ||| |||||| |||||||| ||||| ||| Sbjct 14680464 CCCCCTTGATCAACATAACGAGCTGTATCATTAAAAACTCGCAACATTGGAACAATGCCA 14680523 Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479 || ||| | ||||| ||||| |||||| || || | || | || || || || Sbjct 14680524 TTGGATGTCCCATTTGTTCCACGAATATAGCTGCCTGTGGCACGAATGTTGTGAACAGAG 14680583 Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539 | ||| || || || ||| ||| || | |||||| || | ||||||||||| Sbjct 14680584 ACACCAATTCCTCCAGCCGATTTGCTGATAACAGCACATTCCTTCAAAGTATCATAAATG 14680643 Query 48540 CCTTCTATACTATCATCTATCAT 48562 ||||| || ||||||||| |||| Sbjct 14680644 CCTTCAATGCTATCATCTTTCAT 14680666 >seq8 Length=22573980 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 ||||||| ||| || | || |||| |||||||| ||||| || || | ||| | Sbjct 3580290 AGTTCCTCCATTGAAAAGGGTCGGAGTAGCATGAATGAACCAACGCTGGGACATCAAATG 3580231 Query 48659 ATATGTTTCAATAACAGAATCTATATCC-CATTGATGTATACCTATAGATACACGCATTA 48717 || |||| | | |||| || || || | ||| |||||||| | ||| || | ||| | Sbjct 3580230 GTAGGTTTGGAGAGCAGACTCGATGTCATCCTTG-TGTATACCAACAGAAACCCTCATCA 3580172 Query 48718 ACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCA 48777 |||| | || || ||||| ||||| || | ||||| || ||||| || || | || | Sbjct 3580171 ACATGTGCTGCGGCCTTTCCACAATCTTCTCATTTACCTTTAAAAGGTAGGACCTCTCTA 3580112 Query 48778 ATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAAT 48826 |||||||||||||| |||| || |||||| | |||| ||| || Sbjct 3580111 GAGTTTTAAAACCAAAGTAGTCATAATCAAAGTCTCTTTCATAAATGAT 3580063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107450938880