Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq192 547 2e-151 seq2 462 7e-126 seq6 82.4 2e-11 >seq192 Length=157790 Score = 547 bits (606), Expect = 2e-151 Identities = 725/999 (73%), Gaps = 14/999 (1%) Strand=Plus/Plus Query 35964 TCAGCAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 36023 ||| |||| ||||| || || ||||| || || || ||||| ||||||||||||||||| Sbjct 367 TCAACAGCAGCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATA 426 Query 36024 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 36083 || | || || ||||||| ||| ||||||||||| | || | || | |||| Sbjct 427 CCAAGGTTAGCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 486 Query 36084 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 36143 || || || |||||||| ||||| || || | || |||||||||||| || || | | Sbjct 487 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAA 546 Query 36144 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTA 36203 ||||||| ||| || | || ||||||||||| ||||||||||||||| || | Sbjct 547 GCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 606 Query 36204 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 36263 || || || |||||||| |||||||| | || ||||| || |||||||| || || || Sbjct 607 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 666 Query 36264 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 36323 ||||| || ||||| ||||| |||||| | || || | || ||||||| | || Sbjct 667 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 726 Query 36324 GTTTCACGAAT--AAGT-GAGGAAGTAACAAG-ACTTCCGTGCATAGCAGCGAATAAAGC 36379 ||||| | || || | |||| || |||| || || ||||||||| ||||| | Sbjct 727 GTTTCCCTGATCAAACTAGAGGT--TACCAAGGAC--CCATGCATAGCACTGAATAGGGA 782 Query 36380 TCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTC 36439 || |||||||| || || || || | ||| || || || ||||||||||| ||||| || Sbjct 783 GCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTC 842 Query 36440 TGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGA 36499 || || || |||| ||| || |||||||| || || || || || |||||||| ||||| Sbjct 843 GGCTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGA 902 Query 36500 GAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGC 36559 || || ||||| |||| || || | ||||| |||||| || ||||||||||| || Sbjct 903 AAAGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGC 962 Query 36560 TGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCG 36619 |||||| || ||| ||||| || | |||||| || | ||||||||||||| | || Sbjct 963 TGAATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACG 1022 Query 36620 TCCCA---AGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCC 36676 |||| || ||||| | ||||| | ||||| | ||||| |||| ||| || || Sbjct 1023 ACCCATGTAGCAAGCT---ACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACC 1079 Query 36677 TCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACC 36736 ||||| |||||||| || || | || || |||||||| || ||||| ||||| | ||| Sbjct 1080 ACCGTTGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACC 1139 Query 36737 GATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGC 36796 || || || | || | || || ||||| || || ||||||||||| ||||| | Sbjct 1140 TATAGCTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGA 1199 Query 36797 TCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAAT 36856 ||| || ||||| |||||||||||||| ||||| || ||||| ||||||| || ||||| Sbjct 1200 TCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAAT 1259 Query 36857 TAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCAC 36916 | |||| | | ||| || || | | ||||||||| | || |||||||| || | Sbjct 1260 AATAAATACAGAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAAT 1319 Query 36917 ATAGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 36955 || || ||||| | || || || | ||||| ||| || Sbjct 1320 GTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAAAA 1358 >seq2 Length=30405870 Score = 462 bits (512), Expect = 7e-126 Identities = 706/998 (71%), Gaps = 12/998 (1%) Strand=Plus/Minus Query 35964 TCAGCAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 36023 ||| |||| ||||| || || ||||| || || || ||||| ||||||||||||||||| Sbjct 16145562 TCAACAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 16145503 Query 36024 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 36083 || | || | ||||||| ||| ||||||||||| | || | || | |||| Sbjct 16145502 CCAAGGTTAACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 16145443 Query 36084 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 36143 || || || |||||||| ||||| || || | || ||||||||||| || || | | Sbjct 16145442 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTAAA 16145383 Query 36144 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTA 36203 | ||||| ||| || | || ||||||||||| ||||||||||||||| | | Sbjct 16145382 GTGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAGAA 16145323 Query 36204 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 36263 || || || |||||||| |||||||| | || ||||| || |||||||| || | || Sbjct 16145322 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGATA 16145263 Query 36264 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 36323 ||||| || ||||| ||||| |||||| | || || | || ||||||| | Sbjct 16145262 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATG 16145203 Query 36324 GTTTCACGAAT-AAGTGAGGAAGTAACAAG-ACTTCCGTGCATAGCAGCGAATAAAGCTC 36381 ||||| | || || ||| || |||| || || ||||||||| ||||| | | Sbjct 16145202 GTTTCCCTGATCAAACTAGGGGTTACCAAGGAC--CCATGCATAGCACTGAATAGGGAGC 16145145 Query 36382 CACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTG 36441 | |||||||| || || | || | ||| || || || ||||||||||| ||||| | | Sbjct 16145144 CGCCGAATACACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAG 16145085 Query 36442 CCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGA 36501 | || || |||| ||| || |||||||| || || || || || | ||| | ||||| | Sbjct 16145084 CTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAAA 16145025 Query 36502 AACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTG 36561 | || ||||| |||| || || | ||||| |||||| || ||||||||||| |||| Sbjct 16145024 AGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTG 16144965 Query 36562 AATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTC 36621 |||| || ||| ||||| || | | |||| || | |||||| ||||| | || | Sbjct 16144964 AATATGCAACAGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACGAC 16144905 Query 36622 CCAAGTA---AGCTGAGATACCAA-TGAGAAAGTGGAACACAATGAGTTGATATGGTCCT 36677 ||| ||| |||| | ||||| |||||| ||| | ||||| |||| ||| || || Sbjct 16144904 CCATGTAGCAAGCT---ACACCAAGTGAGAA-GTGTAGAACAATTAGTTCATAAGGACCA 16144849 Query 36678 CCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCG 36737 ||||| |||||||| || || | || || |||||||| || ||||| ||||| | ||| Sbjct 16144848 CCGTTGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCT 16144789 Query 36738 ATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCT 36797 || || || | || | || || ||||| || || ||||||||||| ||||| | | Sbjct 16144788 ATAGCTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAT 16144729 Query 36798 CCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATT 36857 || || ||||| | |||||||||||| ||||| || ||||| ||||||| || | ||| Sbjct 16144728 CCAGAAACAGGTTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATA 16144669 Query 36858 AAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACA 36917 | || | | | || || || | | ||||||||| | || |||||||| || | Sbjct 16144668 ATAAGTACAGAAGTTGTGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATG 16144609 Query 36918 TAGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 36955 || || | ||| | || || || | ||||| ||| || Sbjct 16144608 TAAAGACAGTTTTCAGTGCTGGTTATCCAGTTACAAAA 16144571 >seq6 Length=30767194 Score = 82.4 bits (90), Expect = 2e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 35964 TCAGCAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 36023 ||| ||| |||| || || |||| || || || ||||| ||||||||||| ||||| Sbjct 16007514 TCAACAGAAGCTACATCTAGATGGAAATTATGAGCATTACGTTCATGCATAACGTCCATA 16007573 Query 36024 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 36083 || | || || |||||| ||| ||||||||||| | || | || | |||| Sbjct 16007574 CCAAGGTTAGCGTGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 16007633 Query 36084 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATT 36118 || || || |||||||| ||||| || ||||| || Sbjct 16007634 ACTACAGATTGATTGAAATTAAAACCATTGAGTTT 16007668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150454056963968