Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq192 535 1e-147 seq2 450 4e-122 seq6 91.5 4e-14 >seq192 Length=157790 Score = 535 bits (592), Expect = 1e-147 Identities = 722/999 (72%), Gaps = 14/999 (1%) Strand=Plus/Plus Query 25444 TCAGCAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 25503 ||| ||| |||| || |||||||| || || || ||||| ||||||||||||||||| Sbjct 367 TCAACAGCAGCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATA 426 Query 25504 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 25563 || | || || ||||||| ||| ||||||||||| | || | || | |||| Sbjct 427 CCAAGGTTAGCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 486 Query 25564 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 25623 || || || |||||||| ||||| || || | || |||||||||||| || || | | Sbjct 487 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAA 546 Query 25624 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTA 25683 ||||||| ||| || | || ||||||||||| ||||||||||||||| ||| | Sbjct 547 GCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 606 Query 25684 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 25743 || || || |||||||| |||||||| | || ||||| || |||||||| || || || Sbjct 607 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 666 Query 25744 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 25803 ||||| || ||||| ||||| |||||| | || || | || ||||||| | || Sbjct 667 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 726 Query 25804 GTTTCACGAAT--AAGT-GAGGAAGTAACAAG-ACTTCCGTGCATAGCAGCGAATAAAGC 25859 ||||| | || || | |||| || |||| || || ||||||||| ||||| | Sbjct 727 GTTTCCCTGATCAAACTAGAGGT--TACCAAGGAC--CCATGCATAGCACTGAATAGGGA 782 Query 25860 TCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTC 25919 || |||||||| || || || || | ||| || || || ||||||||||| ||||| || Sbjct 783 GCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTC 842 Query 25920 TGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGA 25979 || || || |||| ||| || |||||||| || || || || || |||||||| ||||| Sbjct 843 GGCTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGA 902 Query 25980 GAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGC 26039 || || ||||| |||| || || | ||||| |||||| || ||||||||||| || Sbjct 903 AAAGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGC 962 Query 26040 TGAATAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCG 26099 |||||| || ||| ||||| || | ||| || || | ||||||||||||| | || Sbjct 963 TGAATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACG 1022 Query 26100 TCCCA---AGTAAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCC 26156 |||| || ||||| | || | | ||||| | ||||| |||| ||| || || Sbjct 1023 ACCCATGTAGCAAGCT---ACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACC 1079 Query 26157 ACCGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACC 26216 |||||| || ||||| || || | || || |||||||| || ||||| ||||| | ||| Sbjct 1080 ACCGTTGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACC 1139 Query 26217 GATTGCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGC 26276 || || ||| | || | || || || || || || ||||||||||| ||||| | Sbjct 1140 TATAGCTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGA 1199 Query 26277 TCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAAT 26336 ||| || ||||| |||||||||||||| ||||| || ||||| ||||||| || ||||| Sbjct 1200 TCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAAT 1259 Query 26337 TAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCAC 26396 | |||| | | ||| || || | | ||||||||| | || |||||||| || | Sbjct 1260 AATAAATACAGAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAAT 1319 Query 26397 ATAGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 26435 || || ||||| | || || || | ||||| ||| || Sbjct 1320 GTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAAAA 1358 >seq2 Length=30405870 Score = 450 bits (498), Expect = 4e-122 Identities = 703/998 (70%), Gaps = 12/998 (1%) Strand=Plus/Minus Query 25444 TCAGCAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 25503 ||| ||| |||| || |||||||| || || || ||||| ||||||||||||||||| Sbjct 16145562 TCAACAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 16145503 Query 25504 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 25563 || | || | ||||||| ||| ||||||||||| | || | || | |||| Sbjct 16145502 CCAAGGTTAACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 16145443 Query 25564 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 25623 || || || |||||||| ||||| || || | || ||||||||||| || || | | Sbjct 16145442 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTAAA 16145383 Query 25624 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTA 25683 | ||||| ||| || | || ||||||||||| ||||||||||||||| || | Sbjct 16145382 GTGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAGAA 16145323 Query 25684 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 25743 || || || |||||||| |||||||| | || ||||| || |||||||| || | || Sbjct 16145322 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGATA 16145263 Query 25744 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 25803 ||||| || ||||| ||||| |||||| | || || | || ||||||| | Sbjct 16145262 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATG 16145203 Query 25804 GTTTCACGAAT-AAGTGAGGAAGTAACAAG-ACTTCCGTGCATAGCAGCGAATAAAGCTC 25861 ||||| | || || ||| || |||| || || ||||||||| ||||| | | Sbjct 16145202 GTTTCCCTGATCAAACTAGGGGTTACCAAGGAC--CCATGCATAGCACTGAATAGGGAGC 16145145 Query 25862 CACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTG 25921 | |||||||| || || | || | ||| || || || ||||||||||| ||||| | | Sbjct 16145144 CGCCGAATACACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAG 16145085 Query 25922 CCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGA 25981 | || || |||| ||| || |||||||| || || || || || | ||| | ||||| | Sbjct 16145084 CTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAAA 16145025 Query 25982 AACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTG 26041 | || ||||| |||| || || | ||||| |||||| || ||||||||||| |||| Sbjct 16145024 AGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTG 16144965 Query 26042 AATAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTC 26101 |||| || ||| ||||| || | | | || || | |||||| ||||| | || | Sbjct 16144964 AATATGCAACAGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACGAC 16144905 Query 26102 CCAAGTA---AGCTGAGATGCCGA-TGAGAAAGTGGAACACAATAAGTTGATATGGTCCA 26157 ||| ||| |||| | || | |||||| ||| | ||||| |||| ||| || ||| Sbjct 16144904 CCATGTAGCAAGCT---ACACCAAGTGAGAA-GTGTAGAACAATTAGTTCATAAGGACCA 16144849 Query 26158 CCGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCG 26217 ||||| || ||||| || || | || || |||||||| || ||||| ||||| | ||| Sbjct 16144848 CCGTTGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCT 16144789 Query 26218 ATTGCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCT 26277 || || ||| | || | || || || || || || ||||||||||| ||||| | | Sbjct 16144788 ATAGCTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAT 16144729 Query 26278 CCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATT 26337 || || ||||| | |||||||||||| ||||| || ||||| ||||||| || | ||| Sbjct 16144728 CCAGAAACAGGTTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATA 16144669 Query 26338 AAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACA 26397 | || | | | || || || | | ||||||||| | || |||||||| || | Sbjct 16144668 ATAAGTACAGAAGTTGTGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATG 16144609 Query 26398 TAGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 26435 || || | ||| | || || || | ||||| ||| || Sbjct 16144608 TAAAGACAGTTTTCAGTGCTGGTTATCCAGTTACAAAA 16144571 >seq6 Length=30767194 Score = 91.5 bits (100), Expect = 4e-14 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 25444 TCAGCAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 25503 ||| |||| |||| || ||| |||| || || || ||||| ||||||||||| ||||| Sbjct 16007514 TCAACAGAAGCTACATCTAGATGGAAATTATGAGCATTACGTTCATGCATAACGTCCATA 16007573 Query 25504 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 25563 || | || || |||||| ||| ||||||||||| | || | || | |||| Sbjct 16007574 CCAAGGTTAGCGTGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 16007633 Query 25564 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATT 25598 || || || |||||||| ||||| || ||||| || Sbjct 16007634 ACTACAGATTGATTGAAATTAAAACCATTGAGTTT 16007668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151993253454592