Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq192 551 6e-152 seq2 482 3e-131 seq6 86.0 7e-12 >seq192 Length=157790 Score = 551 bits (610), Expect = 6e-152 Identities = 718/991 (72%), Gaps = 4/991 (0%) Strand=Plus/Minus Query 162502 TGTAACTGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATG 162561 ||||||||| | ||| ||| || || | || | || ||||| ||||| |||||| Sbjct 1355 TGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATG 1296 Query 162562 ATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCA 162621 |||||| || | | ||| | || || || ||||| |||||||| ||||||||| Sbjct 1295 ATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCACCTCCA 1236 Query 162622 GTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATC 162681 || ||||| |||||||| | ||||||||| | || || | || ||||| ||||| || Sbjct 1235 GTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATT 1176 Query 162682 ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGG 162741 || |||||||| | |||||| || ||||| ||| | ||||| || || || ||| Sbjct 1175 ATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGG 1116 Query 162742 GAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTC 162801 ||||| || | ||||||| ||||| || || ||||| |||| |||| | || | Sbjct 1115 GAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTA 1056 Query 162802 CACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTA 162861 |||||| | | || | | ||| |||||| ||||||||||| || ||| | Sbjct 1055 CACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 996 Query 162862 GGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTG 162921 |||||||| |||||||| ||||||||| || || || || | || || ||||| Sbjct 995 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTT 936 Query 162922 TTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCT 162981 |||||| | ||||| | |||||||| || ||||||| ||||| || || || || Sbjct 935 TTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCC 876 Query 162982 GGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTC 163041 |||||||| |||| |||| | || |||||||| |||||||||||||| |||||||| || Sbjct 875 GGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTT 816 Query 163042 CATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCT 163101 || ||| | || || || ||||||||||| || || || || ||||||||||| || || Sbjct 815 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCC 756 Query 163102 CTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTAT 163161 | || || ||| | | ||||| ||||| || || | || || || | ||||| Sbjct 755 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTAC 696 Query 163162 AAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGC 163221 | ||||| ||||| ||||| || || || || || || |||||||| || ||||| || Sbjct 695 AGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGA 636 Query 163222 TTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCA 163281 ||||||||||| ||||| ||||||||| || ||||| | || |||||||| ||||| Sbjct 635 TTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCT 576 Query 163282 TTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTT 163341 | ||||| || | |||||||| || || | ||| | |||||||| |||||| | Sbjct 575 TGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTA 516 Query 163342 AACGGTTTCAACTTCAACCAATCCGTCGTTG--ACGCAGGTGGTAAAGTGATTCCTACTT 163399 || ||||| || ||||| ||||| || |||| | ||| ||| || ||| ||||| Sbjct 515 AATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAG--GGTCGTGTAATTAATACTT 458 Query 163400 GGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTC 163459 |||| ||||| ||||| | || |||||||||||||||||||| || |||||||| | Sbjct 457 GGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCCC 398 Query 163460 ACAACTTCCCACTTGACCTTGCTGCTGCTGA 163490 | || ||||| || || || ||||||| ||| Sbjct 397 ATAATTTCCCTCTAGATCTAGCTGCTGTTGA 367 >seq2 Length=30405870 Score = 482 bits (534), Expect = 3e-131 Identities = 685/956 (72%), Gaps = 12/956 (1%) Strand=Plus/Plus Query 162541 GGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTG----CTTCAT 162596 || ||||| ||||| |||||||||||| ||| | | | || |||||| ||| || Sbjct 16144613 GGATGGTTTGGTGTTTTGATGATCCCTA-CTTTATTG-ACCA-CAACTTCTGTACTT-AT 16144668 Query 162597 CATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGG 162656 ||| | |||||||| ||||||||||| ||||| |||||||| | |||||||| | || Sbjct 16144669 TATTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGG 16144728 Query 162657 TTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTAT 162716 || | || ||||| ||||| || || |||||||| | |||||| || ||||| Sbjct 16144729 ATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTAT 16144788 Query 162717 TGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATGG 162776 ||| | ||||| || || || |||||||| || | ||||||| ||||| || || || Sbjct 16144789 AGGTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGG 16144848 Query 162777 TGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCG 162836 ||| |||| |||| | || | |||||| | || | | ||| ||||| Sbjct 16144849 TGGTCCTTATGAACTAATTGTTCTACACTTCTCACTTGGTGTAGCTTGCTACATGGGTCG 16144908 Query 162837 TCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGC 162896 | ||||||| || || ||| | |||| ||| |||||||| ||||||||| || || Sbjct 16144909 TGAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGC 16144968 Query 162897 ACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTC 162956 || || | || || ||||| |||||| | ||||| | |||||||| || || Sbjct 16144969 TCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTC 16145028 Query 162957 TGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGA 163016 ||||| |||| | || || || || |||||||| |||| |||| | || |||||||| | Sbjct 16145029 TGACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAA 16145088 Query 163017 GCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTC 163076 |||||||||||| |||||||| || || ||| | || | || ||||||||||| || || Sbjct 16145089 GCACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTC 16145148 Query 163077 ACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGA 163136 || || ||||||||||| || || | || || || | | ||||| ||||| | | Sbjct 16145149 CCTATTCAGTGCTATGCATGGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAA 16145208 Query 163137 GCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGT 163196 | || || || | ||||| | ||||| ||||| ||||| || || || || | Sbjct 16145209 AAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCAT 16145268 Query 163197 TGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACG 163256 || |||||||| || ||||| || ||||||||||| ||||| ||||||||| || | Sbjct 16145269 AGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTG 16145328 Query 163257 TTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGG 163316 ||| | || |||||||| ||||| | ||||| || | |||||||| || | | || Sbjct 16145329 TTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGG 16145388 Query 163317 TGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTG--AC 163374 | | |||||||| |||||| | || ||||| || ||||| ||||| || |||| | Sbjct 16145389 TATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAG 16145448 Query 163375 GCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATG 163434 ||| ||| || ||| ||||||||| ||||| ||||| | | ||||||||| Sbjct 16145449 TCAG--GGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATG 16145506 Query 163435 GAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTGCTGA 163490 ||||||||||| || ||||||||||| || ||||| || || || ||||||| ||| Sbjct 16145507 GAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq6 Length=30767194 Score = 86.0 bits (94), Expect = 7e-12 Identities = 115/158 (73%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 163335 CAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGACG--CAGGTGGTAAAGTGATT 163392 ||| || || ||||| || ||||| ||||| || ||||| |||| || || ||| Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGG--GTCGTGTAATT 16007612 Query 163393 CCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGT 163452 ||||||||| ||||| ||||| || ||||||||||| |||||||| || ||| Sbjct 16007611 AATACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGT 16007552 Query 163453 AATGCTCACAACTTCCCACTTGACCTTGCTGCTGCTGA 163490 |||||||| || |||| || || | ||| ||| ||| Sbjct 16007551 AATGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553083472596480