Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 172 1e-37 >seq3 Length=27368013 Score = 172 bits (190), Expect = 1e-37 Identities = 561/861 (65%), Gaps = 18/861 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || || ||||| ||||| || |||||||||| || ||| ||| Sbjct 26803822 CTGGTACTCCCCAACCCTCTTCTCGAAGAAATTGGTCTTCCCCTGCAGGCTGATCAGCTC 26803763 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||| | ||| ||||| | || || | | || || || | || ||||| Sbjct 26803762 CATCCAATCGAACGGGTTCTGCACATTGTAAATCTTCGAGTAC--CCAAGCTCACCCAGC 26803705 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 || |||||| ||| |||||||||| | ||| || | |||||| || | ||| Sbjct 26803704 AGCCTATCCGCCACGAACTCGATGTACTGGCTCATCAGATCGCCGTTCATCCCCACTAGG 26803645 Query 48017 GA-CACGGGCAAAGCCTTTGTG-AGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 | ||||| ||| ||| | | ||||| ||||||||| ||| || | | | | Sbjct 26803644 GCGCACGGT--AAGGCTTCGCACACGAACTCTCTCTCTATCTCCACCGCGTTTCGTATGA 26803587 Query 48075 TCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 || ||| || || ||| | || || | ||| || | || |||| ||| | Sbjct 26803586 TCGACTTCACTCGATCCTCGCTCAGCTTCTTCCTCAGCAGCGAG---TACAGCAAGCACG 26803530 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| | |||||| || || || || ||| | | |||| ||||| || || | Sbjct 26803529 CGAAGTCGCAGTGCAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAACGTCAGTCCCG 26803470 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| | ||| | || || ||||| || || || ||| ||| |||||||| || | Sbjct 26803469 GCATTAACCCGCGCTTCTTTAGCCAAAATATCGCGCAAAAACTGCCCGAGAAGAATATCC 26803410 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA-GATC 48313 | ||||| || || || || || ||| | || || |||| | | |||| Sbjct 26803409 CTTCCACGCAAGCAAAGGCCACGATCCGCTCCGCAAACGA----TTCTGAGCCGTCGATC 26803354 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 ||| || ||||| | ||||||||| ||| ||| || || || || ||||| | || Sbjct 26803353 CAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGATGGCGTGAAAA 26803294 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 ||| | || ||| | | |||| | ||||| || || ||||||||| Sbjct 26803293 AGCCTGTTCTTCTCGTCCGAGTCCTTGATGTAGGTCTCCAGAAGGAGGCTGTACATCTCG 26803234 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||||| ||||||||||| | ||||| | ||||| Sbjct 26803233 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGAGCCTCGGAGACCTGG 26803174 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCA-GATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 ||||| | ||| || ||| ||| ||||||| || || || || || ||||| || Sbjct 26803173 ACTTCCTTCATGAACCT-TCCGGCAAGATTCTCCAAAACGATGCCGTCAGAGGCAGCGAA 26803115 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTG 48612 |||||| || || || | | ||| || |||| |||| |||| | ||| | Sbjct 26803114 GAAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCAGGGGTTAGAGTTTCCCAATGGCG 26803055 Query 48613 TACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTA 48672 || ||| | || || || || || || | ||||||||||| || || || ||||| Sbjct 26803054 TAGGTCCTGGCAGAGATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTA 26802995 Query 48673 CATGCCCCATATGTCCGGATA 48693 ||| |||| || ||||| || Sbjct 26802994 CATCTCCCAGATTTCCGGGTA 26802974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530564321280