Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq192 607 8e-169 seq2 526 2e-144 seq6 91.5 2e-13 >seq192 Length=157790 Score = 607 bits (672), Expect = 8e-169 Identities = 709/952 (74%), Gaps = 4/952 (0%) Strand=Plus/Minus Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348 || |||||||| ||| | |||||||| || || ||| |||| || | || |||| Sbjct 1316 GGATGGTTTGGTGTTTTGATGATCCCTACT-TTATTGACCGCAACTTCTGTATTTATTAT 1258 Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408 || ||| ||||||| ||||| || || || || || || || ||||| ||| ||||||| Sbjct 1257 TGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 1198 Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468 | | | || || ||||| || || |||||||| || |||| | |||| || || || Sbjct 1197 TTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGG 1138 Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528 | ||||| ||||| || |||||||| ||||| ||||||| ||| | ||||||||||| Sbjct 1137 TTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGG 1078 Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCT-TTGCTTATATGGGTCGTG 8587 |||||| | || | ||| | |||||| | ||||| || ||||| | |||||||||| Sbjct 1077 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCT-ACATGGGTCGTG 1019 Query 8588 AATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTC 8647 | ||||||||| || ||| || || ||||| |||||||| ||||||||| || |||| Sbjct 1018 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTC 959 Query 8648 CTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTG 8707 ||||||| |||||| ||||||| ||| | | ||||| |||||||||| || |||| Sbjct 958 CTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTG 899 Query 8708 ATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGC 8767 | |||||||| || || ||||||||||| ||||||| ||| |||| ||||| || |||| Sbjct 898 ACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGC 839 Query 8768 ACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTC 8827 |||||||||| |||||||| || |||||| | || || |||||||| |||||||| || | Sbjct 838 ACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCC 779 Query 8828 TCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAA 8887 | || || |||||||| || | || || ||| || | | || ||||| |||| Sbjct 778 TATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAA 719 Query 8888 CCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTG 8947 || ||| || | || |||| ||||||||||| || ||||| || || || || | Sbjct 718 ATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAG 659 Query 8948 CCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAA 9007 |||||||||| || ||||| || ||||||||||||||||| ||| ||||||||| | Sbjct 658 CCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTT 599 Query 9008 GCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCG 9067 || ||||||||||| ||||| |||||||| || || |||||||||||||| | || Sbjct 598 CTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTA 539 Query 9068 TCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGAC 9127 || || |||||||||||| | ||||| || || ||||| || || | | || | | Sbjct 538 TCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTC 479 Query 9128 AAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAG 9187 | || || || | || || ||||| || | |||||||||| || |||||||||| Sbjct 478 AGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAG 419 Query 9188 TCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTGA 9239 | ||||| ||| | || || || || ||||| || || || || |||| ||| Sbjct 418 TTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 367 Score = 533 bits (590), Expect = 2e-146 Identities = 717/998 (72%), Gaps = 0/998 (0%) Strand=Plus/Plus Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874 ||||| || | ||||||||| | | || ||||| |||||||| ||||||||||| Sbjct 34233 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGC 34292 Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934 ||| | || ||||| ||| ||| | || | || || ||| | || || || || ||| Sbjct 34293 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 34352 Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994 || || ||||| || || ||| | |||||| || | || || ||| ||| | Sbjct 34353 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTA 34412 Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054 || || || || || || || ||| || | | | || ||| | | |||| |||||| Sbjct 34413 ACCGCCGCAGTTTCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGT 34472 Query 10055 CCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTG 10114 ||||| | || |||||||| || ||| || | || || || ||| ||||||| Sbjct 34473 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTT 34532 Query 10115 GCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGA 10174 || || ||||| || |||| |||| || ||||||||||| || ||||| || || || Sbjct 34533 GCTCTACACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 34592 Query 10175 TTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTC 10234 | || | | |||||||| ||||| ||||| || || || || |||||||||||||| Sbjct 34593 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTT 34652 Query 10235 AGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGC 10294 ||| ||||| || ||||| || || |||||| ||||||| |||||||| ||||| || Sbjct 34653 TCTGTATTCCTAATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGGT 34712 Query 10295 GTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 10354 || || || || || || ||| | ||||| |||| || |||||||||||||| | || Sbjct 34713 GTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 34772 Query 10355 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCAC 10414 || || |||||||||||||||||||| | |||| | || || ||| || || || Sbjct 34773 CCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCAT 34832 Query 10415 GGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCT 10474 || | || |||||||| || | | | ||||||| || ||||| || ||| ||| Sbjct 34833 GGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 34892 Query 10475 TTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCC 10534 ||| | ||||||| ||||| || ||||| ||||| || |||||||| || |||||| Sbjct 34893 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCC 34952 Query 10535 CAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTA 10594 || || ||||| |||||||| ||||||||| ||| | |||||||||||| | |||||| Sbjct 34953 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 35012 Query 10595 CCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGT 10654 || || | ||| | |||| | || ||||| | | ||||| || || || || ||| Sbjct 35013 CCAGTAACCGGTTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTACGT 35072 Query 10655 GCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTC 10714 || || || || || ||||| || ||| | || | |||||||||||||||||||| ||| Sbjct 35073 GCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTC 35132 Query 10715 TATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAA 10774 || || || ||||| || | ||||||||| ||||||| |||||||| | || || Sbjct 35133 TACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAG 35192 Query 10775 CCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || || |||| | || | ||||| || || ||||| || Sbjct 35193 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 35230 >seq2 Length=30405870 Score = 526 bits (582), Expect = 2e-144 Identities = 693/953 (73%), Gaps = 6/953 (1%) Strand=Plus/Plus Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATT-TGCTTCATTA 8347 || |||||||| ||| | |||||||| || || ||| || | || | | ||| |||| Sbjct 16144613 GGATGGTTTGGTGTTTTGATGATCCCTACT-TTATTGACCACAACTTCTGTACTT-ATTA 16144670 Query 8348 CCGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGAT 8407 | ||| ||||||| ||||| || || || || || || || |||| ||| |||||| Sbjct 16144671 TTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGAT 16144730 Query 8408 CTCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTG 8467 || | | || || ||||| || || |||||||| || |||| | |||| || || | Sbjct 16144731 CTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAG 16144790 Query 8468 GCCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTG 8527 | | ||||| ||||| || |||||||| ||||| ||||||| ||| | |||||||||| Sbjct 16144791 GTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTG 16144850 Query 8528 GTCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGT-CTTTGCTTATATGGGTCGT 8586 ||||||| | || | ||| | |||||| ||||| || |||| || ||||||||| Sbjct 16144851 GTCCTTATGAACTAATTGTTCTACACTTCTCACTTGGTGTAGCTTGC-TACATGGGTCGT 16144909 Query 8587 GAATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCT 8646 || ||||| || || ||| || || | ||| |||||||| ||||||||| || ||| Sbjct 16144910 GAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCT 16144969 Query 8647 CCTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCT 8706 |||||||| |||||| ||||||| ||| | | ||||| |||||||||| || ||| Sbjct 16144970 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCT 16145029 Query 8707 GATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAG 8766 || | ||| | || || ||||||||||| ||||||| ||| |||| ||||| ||| || Sbjct 16145030 GACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAG 16145089 Query 8767 CACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCT 8826 ||||||||||| |||||||| || |||||| | || | || ||||| |||||||| || Sbjct 16145090 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCC 16145149 Query 8827 CTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAA 8886 || || || |||||||| || | || || || || | | || |||| || Sbjct 16145150 CTATTCAGTGCTATGCATGGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAA 16145209 Query 8887 ACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTT 8946 | || ||| || | || |||| ||||||||||| || ||||| || || || | Sbjct 16145210 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATA 16145269 Query 8947 GCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGA 9006 ||||||||||| || ||||| || ||||||||||||||||| ||| ||||||||| | Sbjct 16145270 GCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGT 16145329 Query 9007 AGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGC 9066 || ||||||||||| ||||| |||||||| || || |||||||||||| | | || Sbjct 16145330 TCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGT 16145389 Query 9067 GTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGA 9126 || || |||||||||||| | ||||| || || ||||| || || | | || | Sbjct 16145390 ATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGT 16145449 Query 9127 CAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAA 9186 || || || || | || || ||||| || | ||||||||| || ||||||||| Sbjct 16145450 CAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAA 16145509 Query 9187 GTCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTGA 9239 || ||||| ||| | || || || || ||||| || || || || |||| ||| Sbjct 16145510 GTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq6 Length=30767194 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 8905 GGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTT 8964 || |||| ||||||||||| || ||||| || || ||||| ||||||||||| || ||| Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 8965 GGTCGCTTGATCTTCCAATATGC 8987 || || ||||||||||||||||| Sbjct 12498377 GGCCGATTGATCTTCCAATATGC 12498355 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 8905 GGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTT 8964 || |||| ||||||||||| || ||||| || | ||||| ||||||||||| || ||| Sbjct 12498661 GGTTACATATTCGGTCAAGAGGAAGAAACCTATTATATTGTAGCCGCTCATGGTTATTTT 12498602 Query 8965 GGTCGCTTGATCTTCCAATATGC 8987 || || ||||||||||||||||| Sbjct 12498601 GGCCGATTGATCTTCCAATATGC 12498579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516478760448000