Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq192 668 0.0 seq2 587 8e-163 seq6 102 9e-17 >seq192 Length=157790 Score = 668 bits (740), Expect = 0.0 Identities = 751/996 (75%), Gaps = 8/996 (1%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 |||||||||||| | |||||||| || ||||| ||||| |||| ||||| || || || Sbjct 1358 TTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1299 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTC 160993 ||||| |||| ||| | | | || || | ||| || || ||||| ||| ||| ||| | Sbjct 1298 ATGAT-CCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCAC 1241 Query 160994 CCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 161053 | || || || || || || ||||||||||| || |||| || | | |||||||||| Sbjct 1240 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACA 1181 Query 161054 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 161113 | || || |||||||| |||| ||| | ||| ||||| ||| ||||||| ||||| | Sbjct 1180 ATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGA 1121 Query 161114 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 161173 | |||||||| || | || |||||| | |||||||||||||||| |||| ||| Sbjct 1120 TATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTG 1061 Query 161174 TGTTCCACTTCCTGATTGGCAT--CTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTA 161231 | | |||||| | |||| | || |||| ||||||||||||||||||||||| || Sbjct 1060 TTCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGTCGTGAGTGGGAACTTAGTTT 1003 Query 161232 CCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAG 161291 ||||||||| ||||| ||||||||| || ||||| || |||||||| || || || | Sbjct 1002 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 943 Query 161292 TGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGG 161351 ||| || ||| || | ||||| | |||||||| || ||||| | ||||| || || Sbjct 942 TGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGG 883 Query 161352 CATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCA 161411 ||||| ||||| ||||||| |||| |||| |||||||| ||||||||||| || ||||| Sbjct 882 AATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCA 823 Query 161412 CCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCA 161471 ||| || || ||| | |||||||| ||||| || ||||| || || |||||||| ||||| Sbjct 822 CCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 763 Query 161472 CGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTA 161531 || || |||| |||||| || | | |||||||| ||||| || || || | Sbjct 762 TGGGTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 703 Query 161532 TGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTT 161591 ||||||| ||||||||||| ||||| ||||| || ||||| || || || || || || Sbjct 702 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTT 643 Query 161592 CGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCT 161651 || || |||| |||||||| ||| |||||||| || || || | || |||||||| Sbjct 642 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCT 583 Query 161652 TGCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATT 161711 |||||||||||||| || || |||||||| || || | || | ||||| ||||| || Sbjct 582 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTT 523 Query 161712 CAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAA 161771 |||| | |||||||| || ||||| || ||| | ||||||||||||||| || || || Sbjct 522 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 463 Query 161772 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAA 161831 || ||||| || || | ||||| ||| ||||| |||||||| ||||| || || || Sbjct 462 TACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 403 Query 161832 TGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 161867 ||| || || |||||||| || || ||||||| ||| Sbjct 402 TGCCCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 367 Score = 500 bits (554), Expect = 9e-137 Identities = 721/1014 (71%), Gaps = 2/1014 (0%) Strand=Plus/Plus Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176 |||||| | | || |||||| | || ||||| ||||||||||| || |||||||| Sbjct 34233 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGC 34292 Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236 || | || ||||| ||| ||| | ||| | ||||||||| | || || || || || Sbjct 34293 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 34352 Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTT 162296 || || |||||||| || ||| | || ||||||||| | || || ||||| | Sbjct 34353 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTA 34412 Query 162297 ACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGT 162356 || || |||||||| ||||| || | | | | || ||| | || | ||||||||| Sbjct 34413 ACCGCCGCAGTTTCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGT 34472 Query 162357 CCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTG 162416 ||||| | ||||| || || | || ||||| ||| | || || || ||||||||||| Sbjct 34473 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTT 34532 Query 162417 GCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA 162476 || || ||||| || || | ||| |||||||| ||| | || || |||||||| || ||| Sbjct 34533 GCTCTACACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 34592 Query 162477 -CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGT 162535 || || | | || ||||| ||||| || || ||||| ||||| |||||||| || || Sbjct 34593 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGT 34651 Query 162536 TAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGG 162595 | ||| || || || ||||| | || || || ||||| || || || || || Sbjct 34652 TTCTGTATTCCTAATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGG 34711 Query 162596 GGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAA 162655 || ||||| || || |||||| | ||||| |||||||||| ||||| ||||| | || Sbjct 34712 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 34771 Query 162656 TCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCA 162715 || ||||| |||||||| || || || | | || | ||| || | | |||||||| Sbjct 34772 CCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCA 34831 Query 162716 TGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGC 162775 ||| | || || |||||||| | | |||||||| || ||||| || || || Sbjct 34832 TGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 34891 Query 162776 ATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTC 162835 ||| || | || || | |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 34892 TTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 34951 Query 162836 ACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGT 162895 || || || || |||||||| || || |||||||| |||||||||||| | ||||| Sbjct 34952 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 35011 Query 162896 TCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCG 162955 || || | ||| | |||| ||| || | || | | || || || || || || || Sbjct 35012 ACCAGTAACCGGTTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTACG 35071 Query 162956 TGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTT 163015 ||| || ||||| || ||||| ||| | ||||| || ||||| ||||| |||||||| || Sbjct 35072 TGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTT 35131 Query 163016 CTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCA 163075 ||| || || || ||||| | || ||||| |||| || ||| | || | || || Sbjct 35132 CTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 35191 Query 163076 ACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 |||||||| ||| || | |||||||| ||||| | || | || |||||||| Sbjct 35192 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 35245 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| |||||||||||||||||||||| ||| |||||| ||| | ||| | ||||| ||| Sbjct 68397 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCAAAT 68338 Query 157751 CCTGTCACCCCGACTTAT 157768 ||||||| ||| || ||| Sbjct 68337 CCTGTCATCCCTACCTAT 68320 >seq2 Length=30405870 Score = 587 bits (650), Expect = 8e-163 Identities = 731/995 (73%), Gaps = 6/995 (1%) Strand=Plus/Plus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 |||||||||||| | |||||||| || ||| | ||||| |||| ||||| || || || Sbjct 16144571 TTTTGTAACTGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTG 16144630 Query 160936 ATGATTCCCTGCTTGCTCGCTGCTACCATTTGTT-TCATCATTGCCTTCGTTGGTGCTCC 160994 ||||| |||| ||| | | | | | ||| | || ||| | ||| ||| ||| || Sbjct 16144631 ATGAT-CCCTACTTTATTGACCACAACTTCTGTACTTATTATTACTTTCATTGCTGCACC 16144689 Query 160995 CCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 161054 || || || || || || |||||| |||| || |||| || | | ||||||||||| Sbjct 16144690 TCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAACAA 16144749 Query 161055 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 161114 || || |||||||| |||| ||| | ||| ||||| ||| ||||||| ||||| || Sbjct 16144750 TATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCGAT 16144809 Query 161115 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 161174 |||||||| || | || |||||| | |||||||||||||||| |||| |||| Sbjct 16144810 ATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGT 16144869 Query 161175 GTTCCACTTCCTGATTGGCAT--CTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTAC 161232 | |||||| |||| | || |||| ||||||||||||||||||| || || | Sbjct 16144870 TCTACACTTCTCACTTGGTGTAGCT-TGCT-ACATGGGTCGTGAGTGGGAGATTAGTTTC 16144927 Query 161233 CGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGT 161292 |||||||| | ||| ||||||||| || ||||| || |||||||| || || || | | Sbjct 16144928 CGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 16144987 Query 161293 GCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGC 161352 || || ||| || | ||||| | |||||||| || ||||| | |||| | || || Sbjct 16144988 GCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAGGA 16145047 Query 161353 ATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCAC 161412 ||||| ||||| ||||||| |||| |||| |||||||| |||||||||| || |||||| Sbjct 16145048 ATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATGCAC 16145107 Query 161413 CCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCAC 161472 || || || ||| | |||| ||| ||||| || ||||| || || |||||||| ||||| Sbjct 16145108 CCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 16145167 Query 161473 GGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTAT 161532 || || |||| ||| || || | | ||||||| |||| || || || | Sbjct 16145168 GGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAATGAA 16145227 Query 161533 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTC 161592 ||||||| ||||||||||| ||||| ||||| || ||| | || || || || || || Sbjct 16145228 GGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTATTTT 16145287 Query 161593 GGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTT 161652 || || |||| |||||||| ||| |||||||| || | || | || |||||||| Sbjct 16145288 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTTCTTCCTA 16145347 Query 161653 GCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTC 161712 |||||||||||||| || || |||||||| || | | || | || || ||||| ||| Sbjct 16145348 GCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACTATGGCTTTC 16145407 Query 161713 AACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAAC 161772 ||| | |||||||| || ||||| || ||| | ||||||||||||||| || || || Sbjct 16145408 AACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAAT 16145467 Query 161773 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAAT 161832 || ||||| || || | ||||| | | ||||| |||||||| ||||| || || ||| Sbjct 16145468 ACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 16145527 Query 161833 GCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 161867 ||||| || |||||||| || || ||||||| ||| Sbjct 16145528 GCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq6 Length=30767194 Score = 102 bits (112), Expect = 9e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 161712 CAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAA 161771 ||| || |||||||| || ||||| || ||| | ||||||||||||||| || || || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 161772 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAA 161831 || ||||| || || | |||| ||| ||||| ||||| || ||||| || || || Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 161832 TGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 161867 |||||| || |||| ||| || | ||| ||| ||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547745885406720