Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq192 549 6e-152 seq2 473 4e-129 >seq192 Length=157790 Score = 549 bits (608), Expect = 6e-152 Identities = 725/993 (73%), Gaps = 18/993 (2%) Strand=Plus/Plus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| |||||| ||||| ||||| |||||||| || ||||||||||| | |||||||| Sbjct 375 AGCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATACCAAGGTT 434 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCT---CCAGCTGCTACAAT 17950 ||| | ||| | | |||||||| ||| | || | || | | | ||||| Sbjct 435 AGCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCAACTACA-- 492 Query 17951 GGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 18010 ||||| ||||| || || ||||| | || |||||||||||| ||| || | || ||| Sbjct 493 -GATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGT 551 Query 18011 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTT 18070 || ||| || | || ||||||||||| | ||||||||||| | | |||||| Sbjct 552 AAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTT 611 Query 18071 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATA 18130 || |||||||| |||||||| | || ||||| || |||||||| || || |||||||| Sbjct 612 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATA 671 Query 18131 CGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTC 18190 || ||||| ||||| || ||| | || || | || ||| ||| || || ||||| Sbjct 672 GGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 731 Query 18191 TCTAAT--AAGT-GAGGAAGTAACAAG-ACTTCCGTGCATAGCAGCGAATAAAGCTCCAC 18246 || || || | |||| || |||| || || ||||||||| ||||| | || | Sbjct 732 CCTGATCAAACTAGAGGT--TACCAAGGAC--CCATGCATAGCACTGAATAGGGAGCCGC 787 Query 18247 CGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTT 18306 ||||||| || || || || | ||| || || || ||||||||||| ||||| ||||||| Sbjct 788 CGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCGGCTT 847 Query 18307 GGAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAAC 18366 ||||||| | |||||| |||||||||||| || || || |||||||| ||||| || | Sbjct 848 GGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAAAAGC 907 Query 18367 TCCCTTGTCCAAAAGGATA-AACGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGA 18424 | ||||| |||| ||||| | | ||||| || | || | |||||||| || || || || Sbjct 908 TTCCTTGACCAATTGGATATATCAAGAAA-ACAGCAGTA-GCAGCTGCAACAGGAGCTGA 965 Query 18425 ATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCC 18484 ||| |||||| |||||| ||||||||||| || | ||||||||||||| | || || Sbjct 966 ATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 1025 Query 18485 CATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTT 18544 |||||| || | || | | ||||| | ||||| |||| ||| || || ||||| Sbjct 1026 CATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTT 1085 Query 18545 ATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGC 18604 |||||||| || || | || || |||||||| || ||||| ||||| | ||| || || Sbjct 1086 GTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATAGC 1145 Query 18605 GTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGA 18664 ||| | || | || || || || || || ||||||||||| ||||| | ||| || Sbjct 1146 TGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGA 1205 Query 18665 GACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAA 18724 ||||| |||||||||||||| || || || ||||| ||||||| || ||||| | ||| Sbjct 1206 AACAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATAAA 1265 Query 18725 TGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAG 18784 | | | || |||||| || | | ||||||||| | || |||||||| || | ||| || Sbjct 1266 TACAGAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 1325 Query 18785 GCGGTTGTTTGTACTCGTAACCCAGTCACATAA 18817 ||||| | || || || | ||||| ||| || Sbjct 1326 ACGGTTTTCAGTGCTGGTTATCCAGTTACAAAA 1358 >seq2 Length=30405870 Score = 473 bits (524), Expect = 4e-129 Identities = 708/992 (71%), Gaps = 16/992 (2%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| |||||| ||||| |||||||||||||| || ||||||||||| | |||||||| Sbjct 16145554 AGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 16145495 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCT---CCAGCTGCTACAAT 17950 | | | ||| | | |||||||| ||| | || | || | | | ||||| Sbjct 16145494 AACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCAACTACA-- 16145437 Query 17951 GGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 18010 ||||| ||||| || || ||||| | || ||||||||||| ||| || | || ||| Sbjct 16145436 -GATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTAAAGTGGT 16145378 Query 18011 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTT 18070 || ||| || | || ||||||||||| | ||||||||||| | | |||||| Sbjct 16145377 AAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAGAATTGTT 16145318 Query 18071 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATA 18130 || |||||||| |||||||| | || ||||| || |||||||| || | |||||||| Sbjct 16145317 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGATATTATA 16145258 Query 18131 CGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTC 18190 || ||||| ||||| || ||| | || || | || ||| ||| | | ||||| Sbjct 16145257 GGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATGGTTTC 16145198 Query 18191 TCTAAT-AAGTGAGGAAGTAACAAG-ACTTCCGTGCATAGCAGCGAATAAAGCTCCACCG 18248 || || || ||| || |||| || || ||||||||| ||||| | || ||| Sbjct 16145197 CCTGATCAAACTAGGGGTTACCAAGGAC--CCATGCATAGCACTGAATAGGGAGCCGCCG 16145140 Query 18249 AATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGG 18308 ||||| || || | || | ||| || || || ||||||||||| ||||| | |||||| Sbjct 16145139 AATACACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAGCTTGG 16145080 Query 18309 AATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTC 18368 ||||| | |||||| |||||||||||| || || || | ||| | ||||| || || Sbjct 16145079 AATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAAAAGCTT 16145020 Query 18369 CCTTGTCCAAAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAAT 18426 ||||| |||| ||||| | | ||||| || | || || ||||||| || || || |||| Sbjct 16145019 CCTTGACCAATTGGATATATCAAGAAA-ACAGCAGTAG-CAGCTGCAACAGGAGCTGAAT 16144962 Query 18427 AAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCA 18486 | |||||| |||||| |||||| |||| || | |||||| ||||| | || |||| Sbjct 16144961 ATGCAACAGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACGACCCA 16144902 Query 18487 TGTAAGCTGCGATGCCGA-TGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTA 18545 |||| || | || | |||||| ||| | ||||| |||| ||| || || ||||| Sbjct 16144901 TGTAGCAAGCTACACCAAGTGAGAA-GTGTAGAACAATTAGTTCATAAGGACCACCGTTG 16144843 Query 18546 TATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCG 18605 |||||||| || || | || || |||||||| || ||||| ||||| | ||| || || Sbjct 16144842 TATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCTATAGCT 16144783 Query 18606 TTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAG 18665 ||| | || | || || || || || || ||||||||||| ||||| | ||| || Sbjct 16144782 GCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGAA 16144723 Query 18666 ACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAAT 18725 ||||| | |||||||||||| || || || ||||| ||||||| || | ||| | || | Sbjct 16144722 ACAGGTTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATAATAAGT 16144663 Query 18726 GCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGG 18785 | | || || ||| || | | ||||||||| | || |||||||| || | ||| || Sbjct 16144662 ACAGAAGTTGTGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGA 16144603 Query 18786 CGGTTGTTTGTACTCGTAACCCAGTCACATAA 18817 | ||| | || || || | ||||| ||| || Sbjct 16144602 CAGTTTTCAGTGCTGGTTATCCAGTTACAAAA 16144571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151318054994048