Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq192 547 8e-151 seq2 471 5e-128 seq6 91.5 2e-13 >seq192 Length=157790 Score = 547 bits (606), Expect = 8e-151 Identities = 700/965 (73%), Gaps = 8/965 (1%) Strand=Plus/Plus Query 103170 CAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCA 103229 ||||||| || || || ||||| || || || ||||| || ||||| ||||||||||| | Sbjct 371 CAGCAGCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATACCAA 430 Query 103230 GACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGA 103289 | ||||||||| | || || ||||| || || | ||||||||||||| ||||| | Sbjct 431 GGTTAGCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCAACTA 490 Query 103290 TGGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGG 103349 || || ||||| || || || || | |||||| ||||| ||||| | ||| | |||| Sbjct 491 CAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGG 550 Query 103350 TGAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGT 103409 | ||||||||||| ||||| || | || |||| Sbjct 551 TAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGT 610 Query 103410 TGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGT 103469 |||| || |||||||||||||| || || || |||||||||||||||||||| || | Sbjct 611 TGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTAT 670 Query 103470 ATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCT 103529 | || ||||||||||| ||||| ||||||| | || ||||||| |||| || || | Sbjct 671 AGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTT 730 Query 103530 CAC-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCG 103588 | | || | | | | || || || | || || |||||||||||||| || || || ||| Sbjct 731 CCCTGATCAAACTA-GAGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGCCGCCG 789 Query 103589 AAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGG 103648 || || ||||| ||||| | |||||| || |||||||| || ||||| || ||||||||| Sbjct 790 AATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCGGCTTGG 849 Query 103649 AAGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAA 103708 || || | |||| ||||||| || || || || || | |||||| | || || || Sbjct 850 AATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAAAAGCTT 909 Query 103709 CCTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTAT 103768 |||||||||| || || | |||||| || || | ||||| ||||||||||| || ||| Sbjct 910 CCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATAT 969 Query 103769 GCGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATA 103828 || ||| ||||| |||||||| ||||||||| | | |||||||||||| ||||| Sbjct 970 GCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATG 1029 Query 103829 TATGCATAG--ATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTAT 103886 || ||| || | |||| | |||||| | || | |||| ||||||||||||| | Sbjct 1030 TA-GCA-AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGT 1087 Query 103887 ACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGT 103946 | | ||| ||||||| || || |||||||| || || || ||||| | ||| || || Sbjct 1088 ATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATAGCTG 1147 Query 103947 TGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGA 104006 |||| |||| || |||||||| || || ||||| || || | | || |||| | Sbjct 1148 CAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGAAA 1207 Query 104007 CGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-G 104065 | ||||||||||| || || ||||| || |||||||| || | |||||||| || || Sbjct 1208 CAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATAAATA 1267 Query 104066 CAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGA 104125 |||| ||||| | ||| | ||| |||||||||| ||||| ||||| |||| || ||| Sbjct 1268 CAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGA 1326 Query 104126 CGGTT 104130 ||||| Sbjct 1327 CGGTT 1331 Score = 538 bits (596), Expect = 4e-148 Identities = 727/1013 (72%), Gaps = 0/1013 (0%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | || | ||||| ||||| |||| || ||||||||| || ||||| Sbjct 35245 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 35186 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | |||| ||| ||||| | |||||| || || || || || || |||||||| ||| Sbjct 35185 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAAAGTC 35126 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || || || |||||||| ||||| | ||| || || || || |||||||| ||||| ||| Sbjct 35125 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCACGTAGG 35066 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || || || ||||| | | || | | ||| |||||| ||| | || || ||||| Sbjct 35065 TTAAGGGCCAGACCGACTACTCCAAGAGCACTCATCCACAAACCGGTTACTGGTACAAAT 35006 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 | |||||||||||| ||||| | ||||| ||| |||| ||||||||||| ||||| Sbjct 35005 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGACCAA 34946 Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069 || ||||| || || |||||||||||||| ||||| |||| || | | || || | Sbjct 34945 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGG 34886 Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129 || || ||||| ||||||||||||| | | ||| || || || || |||| || || Sbjct 34885 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACGGTAGCACCATGAATA 34826 Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189 || | | ||| || | |||| | || ||||| ||||||||||| |||||||| | Sbjct 34825 GCGCATAACAGAGCAGCGCCCAACACCCCAGCAACTCCCATCATATGAAATGGGTTCAAT 34766 Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249 ||||| ||||| || || || | ||||| | ||||| |||||| ||||| |||||||| Sbjct 34765 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCTGCTACACCAAAA 34706 Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309 ||||||||| ||||||| ||||| || || ||||| || || || ||| |||||| Sbjct 34705 CTGGGCGCAAAAAACCAACCAGACTGACCTAGCGGATAAATTAGGAATACAGAAACAAAA 34646 Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369 ||||| || || || ||||| || || ||||| || || || | | || | | ||| Sbjct 34645 ACAGCAATTGGACCGGAGAATGCGATTGCATTATAAGGTCGCAATTGAACAGATCGAGCA 34586 Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429 | || |||||||| | ||| ||||| || || | || || ||||| ||||| |||||| Sbjct 34585 AGTTCAAATTGACGTAACATAAAACCTATTAGTCCGAAAGCGCCGTGTAGAGCAACAAAA 34526 Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489 | ||| || || || | ||| ||| | ||||||||||| |||||||||||||| Sbjct 34525 GTCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCAT 34466 Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549 |||| | | ||| || | | | | ||| || || || || || || || | ||| Sbjct 34465 AGTAACAACAAAGAGTGCGCTAAACTATTAGCCGGAGTGGAAACTGCGGCGGTTAAGAAG 34406 Query 102550 TTAGCACCTTCAAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAACGTC 102609 ||| ||||| | || | || | || ||||||||||| ||||| |||| || Sbjct 34405 TTACAGCCTTCCAAATAGGAACTTGCTAATCCATGGGTATACCATGAAGTTACAAAGGTT 34346 Query 102610 GTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCAGAC 102669 || || || | ||| ||||| | |||| ||| ||| ||||| || | ||| |||||| Sbjct 34345 GTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGGCCAGAC 34286 Query 102670 CAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAA 102722 ||||| ||||| || ||||| || | | ||||||||||| || ||||| Sbjct 34285 CAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 34233 >seq2 Length=30405870 Score = 471 bits (522), Expect = 5e-128 Identities = 690/969 (71%), Gaps = 16/969 (2%) Strand=Plus/Minus Query 103170 CAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCA 103229 ||||||| || || || ||||| || ||||| ||||| || ||||| ||||||||||| | Sbjct 16145558 CAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAA 16145499 Query 103230 GACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGA 103289 | | ||||||| | || || ||||| || || | ||||||||||||| ||||| | Sbjct 16145498 GGTTAACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCAACTA 16145439 Query 103290 TGGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGG 103349 || || ||||| || || || || | |||||| ||||| || || | ||| | | || Sbjct 16145438 CAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTAAAGTGG 16145379 Query 103350 TGAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGT 103409 | ||||||||||| ||||| || || |||| Sbjct 16145378 TAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAGAATTGT 16145319 Query 103410 TGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGT 103469 |||| || |||||||||||||| || || || |||||||||||||||| ||| || | Sbjct 16145318 TGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGATATTAT 16145259 Query 103470 ATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCT 103529 | || ||||||||||| ||||| ||||||| | || ||||||| ||| | || | Sbjct 16145258 AGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATGGTTT 16145199 Query 103530 CAC-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCG 103588 | | || | | | ||| || |||| || || |||||||||||||| || || || ||| Sbjct 16145198 CCCTGATCAAACTAGGGGTTACCAAG-GACCCATGCATAGCACTGAATAGGGAGCCGCCG 16145140 Query 103589 AAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGG 103648 || || || || |||| | |||||| || |||||||| || ||||| || | |||||| Sbjct 16145139 AATACACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAGCTTGG 16145080 Query 103649 AAGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAA 103708 || || | |||| ||||||| || || || || || | | ||| | || || || Sbjct 16145079 AATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAAAAGCTT 16145020 Query 103709 CCTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTAT 103768 |||||||||| || || | |||||| || || | ||||| ||||||||||| || ||| Sbjct 16145019 CCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATAT 16144960 Query 103769 GCGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGAC-AAT-TCCCACTCACGTCCCA 103826 || ||| ||||| |||||| | ||||||||| | || ||| ||||||||||| |||| Sbjct 16144959 GCAACAGCAATCCAAGGGCGCCTACCCAGACGGAA--ACTAATCTCCCACTCACGACCCA 16144902 Query 103827 TATATGCATAG--ATGCCAA-TGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGT 103883 | || ||| || | |||| ||| |||||| | || | |||| |||||||||||| Sbjct 16144901 TGTA-GCA-AGCTACACCAAGTGA-GAAGTGTAGAACAATTAGTTCATAAGGACCACCGT 16144845 Query 103884 TATACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTG 103943 | || | ||| ||||||| || || |||||||| || || || ||||| | ||| || | Sbjct 16144844 TGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCTATAG 16144785 Query 103944 CGTTGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAG 104003 | |||| |||| || |||||||| || || ||||| || || | | || |||| Sbjct 16144784 CTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAG 16144725 Query 104004 CGACGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGA 104063 || |||| |||||| || || ||||| || |||||||| || | ||||| || || | Sbjct 16144724 AAACAGGTTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATAAT-A 16144666 Query 104064 AG--CAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATA 104121 || |||| |||| | ||| | ||| |||||||||| ||||| ||||| |||| || Sbjct 16144665 AGTACAGA-AGTTGTGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTA 16144607 Query 104122 GAGACGGTT 104130 |||| ||| Sbjct 16144606 AAGACAGTT 16144598 Score = 93.3 bits (102), Expect = 5e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 103427 AAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTATGTCTCTTCCTCTTGT 103486 |||||||| || || || |||||||||||||||||||| || || || ||||||||||| Sbjct 26097589 AAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAGGTTTCTTCCTCTTGA 26097530 Query 103487 CCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGT 103527 |||| |||||||| | || ||||||| |||| || || Sbjct 26097529 TCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTGGT 26097489 >seq6 Length=30767194 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 103418 GCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTATGTCTCT 103477 || |||||||||||||| || || || ||||||||||||||||| || || || || ||| Sbjct 12498355 GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGTTTCT 12498414 Query 103478 TCCTCTTGTCCGAACTTGTAACC 103500 |||||||| ||||| ||||||| Sbjct 12498415 TCCTCTTGACCGAATATGTAACC 12498437 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 103418 GCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTATGTCTCT 103477 || |||||||||||||| || || || ||||||||||||||||| || | || || ||| Sbjct 12498579 GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATAATAGGTTTCT 12498638 Query 103478 TCCTCTTGTCCGAACTTGTAACC 103500 |||||||| ||||| ||||||| Sbjct 12498639 TCCTCTTGACCGAATATGTAACC 12498661 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 103170 CAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCA 103229 ||| ||| | || || |||| || ||||| ||||| || ||||| || |||||||| | Sbjct 16007518 CAGAAGCTACATCTAGATGGAAATTATGAGCATTACGTTCATGCATAACGTCCATACCAA 16007577 Query 103230 GACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGA 103289 | |||| |||| | || || ||||| || || | ||||||||||||| ||||| | Sbjct 16007578 GGTTAGCGTGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCAACTA 16007637 Query 103290 TGGACTGGTTGAAGTTGAATCCGTTCAGGTTG 103321 || || ||||| || || || || || ||| Sbjct 16007638 CAGATTGATTGAAATTAAAACCATTGAGTTTG 16007669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633512079567360