Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq192 508 2e-139 seq2 437 3e-118 seq6 91.5 4e-14 >seq192 Length=157790 Score = 508 bits (562), Expect = 2e-139 Identities = 709/987 (72%), Gaps = 8/987 (1%) Strand=Plus/Plus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || || || || ||||| || || || || || |||||||| || || | |||||||| Sbjct 376 GCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 435 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 || ||||||| ||| |||||||| || || || || | || | | | | | | |||| Sbjct 436 GCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCAACTACAGAT 495 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTA--GACACGCCAAGCGCAGCAA 21648 || || || || |||||||| |||||||||||||| || || || ||||| | || Sbjct 496 TGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCG--GTAA 553 Query 21649 ACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAA 21708 |||| |||||||| |||||||| ||||| || |||||||| | | ||| ||||| || | Sbjct 554 ACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGA 613 Query 21709 AGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAG 21768 | ||||||||||||||||| | || |||||||| || ||||| || || ||||| || | Sbjct 614 AACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAGG 673 Query 21769 TCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCAC 21828 | |||||||||||||| || ||||||| | || || | | ||| || || || | Sbjct 674 TTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCC 733 Query 21829 GAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATA 21888 || | || || |||| | || ||||||||| ||| | || || |||| Sbjct 734 TGATCAAACTAGAGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGCCGCCGAATA 793 Query 21889 CGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACA 21948 | || || || || | ||||||||| || |||||||| || |||||||| || ||||| | Sbjct 794 CACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCGGCTTGGAATA 853 Query 21949 CCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCT 22008 | | |||| ||||||| || ||||| || || | ||||||| | |||||||| || | Sbjct 854 CAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAAAAGCTTCCTT 913 Query 22009 GTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAA 22068 | |||| ||||| | | ||| |||||||| ||||| || |||||||| || || |||| Sbjct 914 GACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAA 973 Query 22069 CAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAG 22128 || ||||| || | ||| || || || | |||||||||||||| || ||||||| || Sbjct 974 CAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGT-AG 1032 Query 22129 CAA-AGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGC 22187 ||| || |||| | |||||| | || | |||| | ||||| |||||||| | | Sbjct 1033 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAAC 1092 Query 22188 CATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTG 22247 |||||||||| | ||| |||||||| || ||||| ||||| | || || || | | Sbjct 1093 CATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATAGCTGCAGAG 1152 Query 22248 CTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGT 22307 | |||| | ||| || || || || ||||| ||||| | | || |||| || ||| Sbjct 1153 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGAAACAGGT 1212 Query 22308 TCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTT 22367 || || || ||||| || || || || ||||| ||| || || |||||||| || Sbjct 1213 TCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATAAATACAGAA 1272 Query 22368 GTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTT 22426 || |||| ||| | | | || ||||| | || || |||||||| | ||||||||||| Sbjct 1273 GTTGCGGTCAATAAAGTA-GGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 1331 Query 22427 ATTAGTAGAGGTGACCCAGGAACAAAA 22453 | ||| ||| | |||| |||||| Sbjct 1332 TTCAGTGCTGGTTATCCAGTTACAAAA 1358 >seq2 Length=30405870 Score = 437 bits (484), Expect = 3e-118 Identities = 697/990 (70%), Gaps = 14/990 (1%) Strand=Plus/Minus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || || || || ||||| || || || || || |||||||| || || | |||||||| Sbjct 16145553 GCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 16145494 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 | ||||||| ||| |||||||| || || || || | || | | | | | | |||| Sbjct 16145493 ACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCAACTACAGAT 16145434 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTA--GACACGCCAAGCGCAGCAA 21648 || || || || |||||||| |||||||||||||| ||| || || ||| | | || Sbjct 16145433 TGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTAAAGTG--GTAA 16145376 Query 21649 ACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAA 21708 |||| |||||||| |||||||| ||||| || |||||||| | | || ||||| || | Sbjct 16145375 ACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAGAATTGTTGA 16145316 Query 21709 AGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAG 21768 | ||||||||||||||||| | || |||||||| || ||||| || | ||||| || | Sbjct 16145315 AACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGATATTATAGG 16145256 Query 21769 TCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCAC 21828 | |||||||||||||| || ||||||| | || || | | || | || || | Sbjct 16145255 TTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATGGTTTCCC 16145196 Query 21829 GAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATA 21888 || | | || |||| | || ||||||||| ||| | || || |||| Sbjct 16145195 TGATCAAACTAGGGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGCCGCCGAATA 16145136 Query 21889 CGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACA 21948 | ||||| | || | ||||||||| || |||||||| || ||||||| ||| ||||| | Sbjct 16145135 CACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAGCTTGGAATA 16145076 Query 21949 CCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCT 22008 | | |||| ||||||| || ||||| || || | || ||| | |||||||| || | Sbjct 16145075 CAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAAAAGCTTCCTT 16145016 Query 22009 GTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAA 22068 | |||| ||||| | | ||| |||||||| ||||| || |||||||| || || |||| Sbjct 16145015 GACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAA 16144956 Query 22069 CAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAG 22128 || ||||| || | | | || || || | |||| |||||||| || |||||||| | Sbjct 16144955 CAGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACGACCCATGTA-G 16144897 Query 22129 CAAAG-ACGCCAA-TGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAG 22186 ||| || |||| |||| ||||| | || | |||| | ||||| |||||||| | Sbjct 16144896 CAAGCTACACCAAGTGAG-AAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAA 16144838 Query 22187 CCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACT 22246 ||||||||||| | ||| |||||||| || ||||| ||||| | || || || | Sbjct 16144837 CCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCTATAGCTGCAGA 16144778 Query 22247 GCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGG 22306 | | |||| | ||| || || || || ||||| ||||| | | || |||| || || Sbjct 16144777 GGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGAAACAGG 16144718 Query 22307 TTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATA---AAACA 22363 || || || ||||| || || || || ||||| ||| || | |||||| | | | Sbjct 16144717 TTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATAATAAGTACAGA 16144658 Query 22364 AGTTGTAGCGGCAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACG 22423 |||||| | ||| | | | || ||||| | || || |||||||| | ||||||| Sbjct 16144657 AGTTGT--GGTCAATAAAGTA-GGGATCATCAAAACACCAAACCATCCAATGTAAAGACA 16144601 Query 22424 GTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 ||| | ||| ||| | |||| |||||| Sbjct 16144600 GTTTTCAGTGCTGGTTATCCAGTTACAAAA 16144571 >seq6 Length=30767194 Score = 91.5 bits (100), Expect = 4e-14 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 21712 TAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCT 21771 |||||||||||||||| | || |||||||| || ||||| || |||||||| || || | Sbjct 12498353 TAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGTTT 12498412 Query 21772 CTTCCTCTTGACCAAACTTGTAACC 21796 ||||||||||||| || ||||||| Sbjct 12498413 CTTCCTCTTGACCGAATATGTAACC 12498437 Score = 86.0 bits (94), Expect = 2e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 21712 TAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCT 21771 |||||||||||||||| | || |||||||| || ||||| || ||||||| || || | Sbjct 12498577 TAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATAATAGGTTT 12498636 Query 21772 CTTCCTCTTGACCAAACTTGTAACC 21796 ||||||||||||| || ||||||| Sbjct 12498637 CTTCCTCTTGACCGAATATGTAACC 12498661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146207666645760