Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq192 518 4e-142 seq2 434 1e-116 seq1 96.9 4e-15 >seq192 Length=157790 Score = 518 bits (574), Expect = 4e-142 Identities = 692/959 (72%), Gaps = 2/959 (0%) Strand=Plus/Plus Query 124040 TCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATA 124099 ||| ||| ||||| ||||| ||||| || || ||||| | ||||||||||||||||||| Sbjct 367 TCAACAGCAGCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATA 426 Query 124100 CCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCA 124159 || | ||| || | ||| | || |||| |||| || | | || | | |||| Sbjct 427 CCAAGGTTAGCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 486 Query 124160 ACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATA 124219 || || ||||| || || || |||||||| |||||||| ||||| |||| |||||| | | Sbjct 487 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAA 546 Query 124220 GAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAG 124279 | ||| ||||| | || ||| ||||| || | ||||||||||| || | | | || Sbjct 547 GCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 606 Query 124280 TTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATG 124339 |||||||| |||||| |||||||| | || ||||| ||||| || || ||||| || Sbjct 607 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 666 Query 124340 TTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTT 124399 || || |||||||| ||||| ||||| | ||||| | || || || | ||||| Sbjct 667 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 726 Query 124400 GTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCT 124459 ||||| ||||| | | ||| || || | || |||||||| || ||||| || || Sbjct 727 GTTTCCCTGATCAAACTAGAGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGCCG 786 Query 124460 CCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCT 124519 ||||| | || ||||| ||| |||||| || || ||||| || ||||| ||||| ||| Sbjct 787 CCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCGGCT 846 Query 124520 TGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAAT 124579 ||||| || | ||| |||||||||||||| ||||| || || |||||||| ||||| || Sbjct 847 TGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAAAAG 906 Query 124580 GAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAA 124639 || ||||||| ||| |||| ||||| ||||| ||||| | || || |||||| Sbjct 907 CTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 966 Query 124640 TAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCC 124699 || |||||| |||||||| ||||| || | | | | |||||||||| | ||| Sbjct 967 TATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 1026 Query 124700 ATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTA 124759 ||||| | | ||||| | |||||| | || | | | |||||||||||| || Sbjct 1027 ATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTG 1086 Query 124760 TACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCG 124819 || |||||||||||||| | || |||||||| || ||||| ||||| | || ||||| Sbjct 1087 TATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATAGCT 1146 Query 124820 TTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCT 124879 || | |||| || |||||||| || || ||||| ||||| | ||||| || | Sbjct 1147 GCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGAA 1206 Query 124880 ACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA- 124938 || ||||| | || || || ||||| || |||||||| ||||| || |||| || || Sbjct 1207 ACAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATAAAT 1266 Query 124939 ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAA 124997 ||| | | ||| || | ||| || ||||| | |||||||||||| |||| |||| Sbjct 1267 ACA-GAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAA 1324 Score = 376 bits (416), Expect = 3e-99 Identities = 706/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 35249 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 35190 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | ||||| || || || ||||| Sbjct 35189 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAA 35130 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || ||||| || ||||| || || | Sbjct 35129 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCACG 35070 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 |||||||| || ||||| || | || | || |||||| ||| | || || || Sbjct 35069 TAGGTTAAGGGCCAGACCGACTACTCCAAGAGCACTCATCCACAAACCGGTTACTGGTAC 35010 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 35009 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGA 34950 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| |||||||||||| | || || || | || || Sbjct 34949 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGC 34890 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| | || ||| || ||||| | || || Sbjct 34889 ACGGAA---TGTAT-TTGCA-----CCATCACCAT------------CTTCAAATAAAGT 34851 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||||||||||| || |||| | || | || | | || ||||| Sbjct 34850 ATTTTCTACGGTAGCACCATGAATAGCGCATAACAGAGCAGCGCCCAACACCCCAGCAAC 34791 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| |||||||| || || || ||||| | || | ||| | Sbjct 34790 TCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 34731 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || ||||| ||||| || || || || ||||||| ||||||||| || Sbjct 34730 TCGAAATATAGCTGCTACACCAAAACTGGGCGCAAAAAACCAACCAGACTGACCTAGCGG 34671 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| || || || | | || || || || | | |||||||||| ||| || || Sbjct 34670 ATAAATTAGGAATACAGAAACAAAAACAGCAATTGGACCGGAGAATGCGATTGCATTATA 34611 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| || || | |||||||| | | ||| |||||||| ||||| Sbjct 34610 AGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAGTCC 34551 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || |||| || ||||| |||| ||||| || | ||| |||||||| || Sbjct 34550 GAAAGCGCCGTGTAGAGCAACAAAAGTCCACAGACCGCCTAATTGACACCAACGAGTAAA 34491 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 ||||||||||||||| ||||| || |||| | | || | | | | | || Sbjct 34490 ATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGAGTGCGCTAAACTATTAGCCGG 34431 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 ||||| ||||| || ||||||||||| || || | ||| ||| ||| | ||||| Sbjct 34430 AGTGGAAACTGCGGCGGTTAAGAAGTTACAGCCTTCCAAATAGGAACTTGCTAATCCATG 34371 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| ||||||||| || | | | ||| || Sbjct 34370 GGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGC 34311 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || || |||||||| |||| || || || || || ||| |||||| Sbjct 34310 ACAAGGAAAGAGCAATAGGCCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCA 34251 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 34250 GTCATCCATAATATCAAA 34233 >seq2 Length=30405870 Score = 434 bits (480), Expect = 1e-116 Identities = 673/959 (70%), Gaps = 2/959 (0%) Strand=Plus/Minus Query 124040 TCAGCAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATA 124099 ||| ||| ||||| ||||| ||||| || || ||||| | ||||||||||||||||||| Sbjct 16145562 TCAACAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 16145503 Query 124100 CCCAAGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCA 124159 || | ||| | | ||| | || |||| |||| || | | || | | |||| Sbjct 16145502 CCAAGGTTAACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 16145443 Query 124160 ACAACTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATA 124219 || || ||||| || || || |||||||| |||||||| ||||| || | |||||| | | Sbjct 16145442 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTAAA 16145383 Query 124220 GAGGTTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAG 124279 | ||| ||||| | || ||| ||||| || | ||||||||||| || | | | || Sbjct 16145382 GTGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAGAA 16145323 Query 124280 TTGTTGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATG 124339 |||||||| |||||| |||||||| | || ||||| ||||| || || |||| || Sbjct 16145322 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGATA 16145263 Query 124340 TTGTATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTT 124399 || || |||||||| ||||| ||||| | ||||| | || || || | | | | Sbjct 16145262 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATG 16145203 Query 124400 GTTTCTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCT 124459 ||||| ||||| | | || || || | || |||||||| || ||||| || || Sbjct 16145202 GTTTCCCTGATCAAACTAGGGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGCCG 16145143 Query 124460 CCGAACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCT 124519 ||||| | || ||| | ||| |||||| || || ||||| || ||||| |||| ||| Sbjct 16145142 CCGAATACACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAGCT 16145083 Query 124520 TGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAAT 124579 ||||| || | ||| |||||||||||||| ||||| || || | ||| | ||||| || Sbjct 16145082 TGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAAAAG 16145023 Query 124580 GAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAA 124639 || ||||||| ||| |||| ||||| ||||| ||||| | || || |||||| Sbjct 16145022 CTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 16144963 Query 124640 TAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCC 124699 || |||||| |||||||| ||| | || | | | | | ||||||| | ||| Sbjct 16144962 TATGCAACAGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACGACCC 16144903 Query 124700 ATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTA 124759 ||||| | | ||||| |||||| | || | | | |||||||||||| || Sbjct 16144902 ATGTAGCAAGCTACACCAAGTGAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTG 16144843 Query 124760 TACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCG 124819 || |||||||||||||| | || |||||||| || ||||| ||||| | || ||||| Sbjct 16144842 TATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCTATAGCT 16144783 Query 124820 TTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCT 124879 || | |||| || |||||||| || || ||||| ||||| | ||||| || | Sbjct 16144782 GCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGAA 16144723 Query 124880 ACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGA-A 124938 || |||| | || || || ||||| || |||||||| ||||| || | || || | Sbjct 16144722 ACAGGTTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATAATAAGT 16144663 Query 124939 ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAA 124997 ||| | | || || | ||| || ||||| | |||||||||||| |||| |||| Sbjct 16144662 ACA-GAAGTTGTGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAA 16144605 >seq1 Length=47851208 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || ||||| ||||| ||||| || ||||| || || ||||| ||||| || || || Sbjct 35961960 TGAGCAGTGCAAATGTTGCTGGTAGCCTTGTCCCTCCTGATATGTTGCTCCCTTGTCTGC 35961901 Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434 | || | | ||||| || ||| || |||| || ||| | |||||| | Sbjct 35961900 ATCGCCATACGCAGCGCAGGCTTCCCTGAAGAATCAACACTAAC--ACCAATAATTCTTC 35961843 Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494 | || ||| | ||||| |||| | | || || | |||||| |||||||||||||| | Sbjct 35961842 CCGGCATCATCCTCTTGTACTCTTGGGAGGTGGCCAGGAATGCTGCATGAGGACCTCCAT 35961783 Query 139495 ATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 | ||||| |||| ||||||||| || | || ||| ||||||| Sbjct 35961782 AACCCATTGGAACACCAAACCTCTGTGCAGAGCCAACAACAATATC 35961737 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||||||||||||| | ||||||||| ||||||||||||||||| || ||||| || || Sbjct 35964316 ACACCAATAGGACCCATGCCAGGACCACCACCTCCATGTGGAATGCAAAATGTTTTGTGG 35964257 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTG 138298 | ||| ||||| || ||||| || ||| || ||| ||| ||||| ||||| Sbjct 35964256 AGATTGAGATGGCAAACATCAGCTCCAATCCAACCTGGGCTTGTCAGACCAACCTG 35964201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997010403840