Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq192 589 3e-163 seq2 491 6e-134 seq6 87.8 2e-12 seq1 86.0 8e-12 >seq192 Length=157790 Score = 589 bits (652), Expect = 3e-163 Identities = 721/976 (74%), Gaps = 10/976 (1%) Strand=Plus/Plus Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784 ||| ||||||| ||||| | || ||||||||||| || | ||| || || || || | Sbjct 367 TCAACAGCAGCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATA 426 Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844 ||||| ||| ||||| | || || |||||||| || | ||||||||||| |||| Sbjct 427 CCAAGGTTAGCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 486 Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGT 26904 | ||||| |||||||| || ||||| || | ||||||||||| ||| | ||| | Sbjct 487 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAA 546 Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAG 26964 ||||| |||||||| || || || ||||| ||||| |||||||| || || ||||| || Sbjct 547 GCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 606 Query 26965 TTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATG 27024 |||||||| |||||||||||||||||| || || || || ||||| || || ||||| Sbjct 607 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 666 Query 27025 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTC 27084 || ||||| ||||| ||||||||||| | ||||| | || || ||| |||| || Sbjct 667 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 726 Query 27085 GTCTCACGGACGAGTGAAGATGTAACCA--GACTTCCGTGCATAGCAGAGAAAAGAGATC 27142 || || | || | ||| || |||| ||| || ||||||||| ||| || || | Sbjct 727 GTTTCCCTGATCAAACTAGAGGTTACCAAGGAC--CCATGCATAGCACTGAATAGGGAGC 784 Query 27143 CACCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTG 27202 | |||||||| ||||| || || | |||||| || |||||||||||||| ||||| || | Sbjct 785 CGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCGG 844 Query 27203 CCTGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGA 27262 | |||||||||| |||| |||| |||||||| ||||| || || |||||| | || || | Sbjct 845 CTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAAA 904 Query 27263 AAGAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAG 27322 | |||||||| | ||||| | | ||| || ||| | ||||| || || ||||| | Sbjct 905 AGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTG 964 Query 27323 AATATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTC 27382 ||||||| ||| ||||| || |||||||| | ||| | |||||||||||||| | Sbjct 965 AATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGAC 1024 Query 27383 CCATATAAGCATAG--ATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACC 27440 |||| | |||| || | || | | |||||| | || | |||| |||||||||| Sbjct 1025 CCATGT-AGCA-AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACC 1082 Query 27441 GTTATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGAT 27500 ||| || ||||| ||||| | || || |||||||| || ||||| ||||| | ||| || Sbjct 1083 GTTGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTAT 1142 Query 27501 TGCATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACC 27560 || || | || | || ||||||||||| || ||||| ||||| | | || || Sbjct 1143 AGCTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCC 1202 Query 27561 AGCAACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAAT 27620 || ||| |||||||||||||| |||||||| || || ||||| || ||||| || | ||| Sbjct 1203 AGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAAT 1262 Query 27621 GAA-GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACAT 27679 || |||| |||||| | || | || |||||||||| ||||| ||||| |||| | Sbjct 1263 AAATACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGT 1321 Query 27680 ACAAACGGTTGTTAGT 27695 | | |||||| | ||| Sbjct 1322 AAAGACGGTTTTCAGT 1337 Score = 506 bits (560), Expect = 3e-138 Identities = 725/1019 (71%), Gaps = 2/1019 (0%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCAATTACAGGAAAGTTTTCGTGTGGTT 23445 || ||||||| || || | || || | |||||| | || |||||| || || | Sbjct 35250 ATTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 35191 Query 23446 GGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGA 23505 | || || | |||||| |||| | || | ||| || | ||||||||| ||||||| Sbjct 35190 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGA 35131 Query 23506 AGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCAC 23565 | |||||| | | |||||| || ||||| || || ||| || || ||||| |||| Sbjct 35130 AAGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCAC 35071 Query 23566 GAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAA 23625 | || ||||| || || || | | |||| || | | ||| | ||| | || || | Sbjct 35070 GTAGGTTAAGGGCCAGACCGACTACTCCAAGAGCACTCATCCACAAACCGGTTACTGGTA 35011 Query 23626 CAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTG 23685 |||| ||||||||||| || |||||||| |||||| ||| |||||||| |||||||| | Sbjct 35010 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 34951 Query 23686 ACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACG 23745 ||||||| || || || || ||||| ||||| || || || | ||||| | | || | Sbjct 34950 ACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAG 34891 Query 23746 CTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCAT 23805 | || || ||||| || ||||||||| | | ||||| || || ||| | |||| Sbjct 34890 CACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACGGTAGCACCAT 34831 Query 23806 GAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGT 23865 ||||||| | | || || | |||| | |||||||||||||||||||| || |||| Sbjct 34830 GAATAGCGCATAACAGAGCAGCGCCCAACACCCCAGCAACTCCCATCATATGAAATGGGT 34771 Query 23866 TGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACAC 23925 | | ||||| |||||||| || |||| ||||| | ||| | || || || || |||| Sbjct 34770 TCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCTGCTACAC 34711 Query 23926 CGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACA 23985 | ||||| |||||||| |||||| ||||| || | ||||| || ||||||||||| | Sbjct 34710 CAAAACTGGGCGCAAAAAACCAACCAGACTGACCTAGCGGATAAATTAGGAATACAGAAA 34651 Query 23986 CGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA- 24044 | || |||||||| ||||| || || || || ||||| || || || | | || ||| Sbjct 34650 CAAAAACAGCAATTGGACCGGAGAATGCGATTGCATTATAAGGTCGCAATTGAAC-AGAT 34592 Query 24045 CGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCA 24104 || || |||||||| |||||||||||||||||||| ||| | || || ||||| |||||| Sbjct 34591 CGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAGTCCGAAAGCGCCGTGTAGAGCA 34532 Query 24105 ACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGA 24164 ||||| | ||| || || || | ||| ||| || ||| || ||||| | |||||| Sbjct 34531 ACAAAAGTCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 34472 Query 24165 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGTA 24224 ||||| |||| | | ||| || | | | | ||| || || || || || || || Sbjct 34471 CCCCATAGTAACAACAAAGAGTGCGCTAAACTATTAGCCGGAGTGGAAACTGCGGCGGTT 34412 Query 24225 AGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACA 24284 | |||||| || || | ||||||||| || | ||||||||| ||||| || ||| Sbjct 34411 AAGAAGTTACAGCCTTCCAAATAGGAACTTGCTAATCCATGGGTATACCATGAAGTTACA 34352 Query 24285 AAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAGT 24344 || | ||| || || | |||||| || | || | ||| ||| |||| || | || Sbjct 34351 AAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGG 34292 Query 24345 CCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAA 24403 ||||||||||| ||||| || ||||| |||| | |||||| |||| || ||||| Sbjct 34291 CCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 34233 >seq2 Length=30405870 Score = 491 bits (544), Expect = 6e-134 Identities = 703/979 (72%), Gaps = 16/979 (2%) Strand=Plus/Minus Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784 ||| ||||||| ||||| | || |||||||| || || | ||| || || || || | Sbjct 16145562 TCAACAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 16145503 Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844 ||||| | | ||||| | || || |||||||| || | ||||||||||| |||| Sbjct 16145502 CCAAGGTTAACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 16145443 Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTG--GATACACCAA 26902 | ||||| |||||||| || ||||| || | ||||||||||| || ||||| || Sbjct 16145442 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTAAA 16145383 Query 26903 GTGCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTG 26962 ||| || |||||||| || || || ||||| ||||| |||||||| || || |||| | Sbjct 16145382 GTG--GTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAG 16145325 Query 26963 AGTTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGA 27022 | |||||||| |||||||||||||||||| || || || || ||||| || || | || Sbjct 16145324 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGA 16145265 Query 27023 TGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAG 27082 | || ||||| ||||| ||||||||||| | ||||| | || || ||| ||| Sbjct 16145264 TATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTA 16145205 Query 27083 TCGTCTCACGGACGAGTGAAGATGTAACCA--GACTTCCGTGCATAGCAGAGAAAAGAGA 27140 | || || | || | || || |||| ||| || ||||||||| ||| || || Sbjct 16145204 TGGTTTCCCTGATCAAACTAGGGGTTACCAAGGAC--CCATGCATAGCACTGAATAGGGA 16145147 Query 27141 TCCACCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTC 27200 || |||||||| || || | || | |||||| || |||||||||||||| ||||| | Sbjct 16145146 GCCGCCGAATACACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTT 16145087 Query 27201 TGCCTGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGA 27260 || |||||||||| |||| |||| |||||||| ||||| || || | ||| | || || Sbjct 16145086 AGCTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGA 16145027 Query 27261 GAAAGAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGC 27320 || |||||||| | ||||| | | ||| || ||| | ||||| || || ||||| Sbjct 16145026 AAAGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGC 16144967 Query 27321 AGAATATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACG 27380 |||||||| ||| ||||| || ||| |||| | ||| | | ||||||||||| Sbjct 16144966 TGAATATGCAACAGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACG 16144907 Query 27381 TCCCATATAAGCATAG--ATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCA 27438 ||||| | |||| || | || | |||||| | || | |||| |||||||| Sbjct 16144906 ACCCATGT-AGCA-AGCTACACCAAGTGAGAAGTGTAGAACAATTAGTTCATAAGGACCA 16144849 Query 27439 CCGTTATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCG 27498 ||||| || ||||| ||||| | || || |||||||| || ||||| ||||| | ||| Sbjct 16144848 CCGTTGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCT 16144789 Query 27499 ATTGCATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAA 27558 || || || | || | || ||||||||||| || ||||| ||||| | | || Sbjct 16144788 ATAGCTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAT 16144729 Query 27559 CCAGCAACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACA 27618 |||| ||| |||| ||||||||| |||||||| || || ||||| || ||||| | | | Sbjct 16144728 CCAGAAACAGGTTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATA 16144669 Query 27619 ATGAAG--CAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAA 27676 || ||| |||| ||||| | || | || |||||||||| ||||| ||||| |||| Sbjct 16144668 AT-AAGTACAGA-AGTTGTGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAA 16144611 Query 27677 CATACAAACGGTTGTTAGT 27695 || | || ||| | ||| Sbjct 16144610 TGTAAAGACAGTTTTCAGT 16144592 >seq6 Length=30767194 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 26725 TCAGCAGCAGCAAGATCCA-ATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAA 26783 ||| ||| ||| | ||| | ||||||| ||||| || || | ||| || || || || | Sbjct 16007514 TCAACAGAAGCTACATCTAGATGGAAA-TTATGAGCATTACGTTCATGCATAACGTCCAT 16007572 Query 26784 TCCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATC 26843 ||||| ||| |||| | || || |||||||| || | ||||||||||| ||| Sbjct 16007573 ACCAAGGTTAGCGTGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATC 16007632 Query 26844 AATCACAGACTGATTGAAGTTGAAACCGTTGAGATTG 26880 || ||||| |||||||| || ||||| ||||| ||| Sbjct 16007633 AACTACAGATTGATTGAAATTAAAACCATTGAGTTTG 16007669 >seq1 Length=47851208 Score = 86.0 bits (94), Expect = 8e-12 Identities = 181/269 (67%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 46980 ATCATCGCGGGAAGAACATGCGAACTTTCTAGGTCAAAATTATCATTTGGACCATATAGG 47039 |||| || || | ||| |||||| | || ||| ||| || |||| ||| ||||| | Sbjct 8039068 ATCAATGCTGGCAAAACGTGCGAATTCTCGGGGTGAAAGTTGTCATGTGGCCCATACAAA 8039009 Query 47040 TTTGTAGGCATCAAAGAGATAGCATTAAATCCATACTGCTGATGGTATGCCTGACACATC 47099 || || |||||| || || |||| | ||||| |||| ||||| |||||| Sbjct 8039008 TTGGTGGGCATCCCCGAAATCGCATCCCAATTGTACTGAATCCGGTAAGCCTGGCACATC 8038949 Query 47100 TTGATACCAGCAATCTTTGCAATAGCATAAGAATCATTACTAGGTTCAAGAGGACCACTC 47159 ||||| || |||||||| ||||| ||||| | ||||| | || || ||||| || | Sbjct 8038948 TTGATCCCGGCAATCTTGGCAATCGCATACCACTCATTTGTGGGCTCCAGAGGGCC---C 8038892 Query 47160 ATTAGATATTC---TTCCCTAATAGGTTGTTCACATAATTTTGGATAAATGCAGGAAGAA 47216 ||| || | ||| ||||| ||| || || || ||||| || || || Sbjct 8038891 GTTAACAATGCGCTTTCGGGGATAGGCTGTGGCGCGAACTTGGGGTAAATACAAGAGGAG 8038832 Query 47217 CCAAGAAATAAAAGTTTCTTAACACCAAA 47245 || ||||| || || ||||| || || || Sbjct 8038831 CCGAGAAACAAGAGCTTCTTGACTCCGAA 8038803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665492802813440