Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 109 7e-19 seq8 98.7 1e-15 seq1 98.7 1e-15 >seq3 Length=27368013 Score = 109 bits (120), Expect = 7e-19 Identities = 303/462 (66%), Gaps = 12/462 (3%) Strand=Plus/Plus Query 175191 TGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAA 175250 |||||||| ||| | || | ||||| | || ||| ||| ||||||| || | || Sbjct 9412608 TGATGTTGCTGGGGTAGATGAAGCCAAGCAGGATTTTGTGGAGGTTGTGGAATTCTTGAA 9412667 Query 175251 GCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGG 175310 | | || ||||| | || ||| || || || ||| | ||||| | || Sbjct 9412668 GAAGCCTGAGAGGTTCACTGCTGTTGGGGCTCGAATTCCTAAAGGGGTTCTTCTTGTTGG 9412727 Query 175311 TAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCC 175370 | ||||| || |||||||| || | || || || || |||||| | ||| || Sbjct 9412728 TCCTCCAGGAACTGGAAAGACTCTGTTAGCAAAGGCAATTGCTGGTGAAGCTGGTGTTCC 9412787 Query 175371 ATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAG 175430 ||| || ||| | | | ||||| || |||||||||||||| ||||| | Sbjct 9412788 ATTTTTCTCCATCTCAGGTTCTGAGTTTGTTGAAATGTTTGTTGGTGTTGGTGCTTCCCG 9412847 Query 175431 GGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGA 175490 ||||| ||||| ||| | | ||| || ||| ||| || ||||| || ||||||| Sbjct 9412848 AGTTCGTGATCTTTTTAAGAAGGCCAAAGAGAATGCACCTTGCATTGTATTTGTTGATGA 9412907 Query 175491 GATTGATGCGGTGGGCAAGCAACGCAGCGCTGG---TGGTATGCCAGCAAATGACGAGAG 175547 |||||||| || || |||| | | |||| |||| | | |||||| || || Sbjct 9412908 AATTGATGCTGTTGGACGGCAAAGAGGAACTGGAATTGGTGGG---GGAAATGATGAAAG 9412964 Query 175548 AGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGG--- 175604 ||||||||| ||||||| || | || || |||||||| ||||| | ||||| Sbjct 9412965 AGAACAAACCCTTAATCAGCTTTTGACAGAAATGGATGGTTTTGAGGGCAACACTGGTAT 9413024 Query 175605 CATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGA 175646 |||||||| |||| || ||||| | | || || ||||| Sbjct 9413025 CATTGTGG---TTGCAGCGACTAACAGGGCAGACATTCTTGA 9413063 >seq8 Length=22573980 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 75933 AGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATC 75992 ||||| ||||||| | ||| |||||||| ||||| |||| || |||||| ||||||| Sbjct 3581476 AGGATTCTTGTAATAGGAAAAGTAACCAGCAGAATCTGGGTACCATCAAGTCTTCAAATC 3581535 Query 75993 TTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCAT 76052 ||||||| |||||| | |||| |||| | || || || ||||| |||||||||| Sbjct 3581536 TTTGCACTGAAATTATTGAGTTCACAAGTCCAACAGAAACTGCAGTTTGTAATTTGGCAT 3581595 Query 76053 CAATCGCCCTTCCAAAGTATGTCAATGAAGAG 76084 | || || | || |||||||| ||| || Sbjct 3581596 CCATTGCATTACCCCGATATGTCAAGGAAAAG 3581627 >seq1 Length=47851208 Score = 98.7 bits (108), Expect = 1e-15 Identities = 216/319 (68%), Gaps = 6/319 (2%) Strand=Plus/Minus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 ||| ||||| ||||| |||| ||| | | |||| || ||||| || |||||||| Sbjct 32999993 TGGAGCCAAAATCCCAAAAGGCTGTCTTTTGGTGGGTCCACCTGGTACCGGCAAGACCCT 32999934 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAA 175394 || || || ||| | || || || | || || || || ||| | || || | Sbjct 32999933 TCTGGCTCGGGCCGTGGCCGGCGAGGCTGGGGTGCCGTTTTTCTCTTGCGCAGCTTCAGA 32999874 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 || ||||| ||||||| || |||||||| || || || || | || || | || Sbjct 32999873 GTTCGTGGAATTGTTTGTGGGAGTGGGTGCGTCGAGAGTGCGGGACTTGTTCGAGAAGGC 32999814 Query 175455 CC-GCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAAC 175513 | | ||| | || || ||||| |||||||| ||||||||||| ||||| | ||| Sbjct 32999813 CAAGTCGAAAGCG-CCGTGCATTGTGTTCATTGACGAGATTGATGCAGTGGGGAGGCAGA 32999755 Query 175514 GCAGCGCTGGT--GGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACT 175571 | | || ||| || | | | ||||| ||||| || || || |||||||| || | Sbjct 32999754 GAGGAGCAGGTATGGGAGGTGGG--AATGATGAGAGGGAGCAGACCATTAATCAGCTGTT 32999697 Query 175572 CACCGAGATGGATGGCTTT 175590 || ||||||||||||||| Sbjct 32999696 GACGGAGATGGATGGCTTT 32999678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568168232960