Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq192 502 3e-137 seq2 434 1e-116 seq6 87.8 2e-12 >seq192 Length=157790 Score = 502 bits (556), Expect = 3e-137 Identities = 711/995 (71%), Gaps = 6/995 (1%) Strand=Plus/Plus Query 7882 TCAGCAGATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATA 7941 ||| ||| |||| |||| ||||| || || ||||| | ||||||||||||||||||| Sbjct 367 TCAACAGCAGCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATA 426 Query 7942 CCTAAGTTTGCTCTGTT--TAATACGTCACCCCATGTAGGAATGATTTTACCATTAACAT 7999 || | ||| || | ||| ||||| ||| |||| ||| ||| | ||| | | || Sbjct 427 CCAAGGTTAGCGCGGTTAATAATA--TCAGCCCAAGTATTAATTACACGACCCTGACTAT 484 Query 8000 CAACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCA 8059 |||| || ||||| || || ||||| || || | ||| || ||||| |||| ||||| | Sbjct 485 CAACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTA 544 Query 8060 TAGAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTAC 8119 || || ||||| | || ||| || || | | ||| |||||||| || | | | | Sbjct 545 AAGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAG 604 Query 8120 TGTTGTT-AAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACA 8178 ||||| |||| | ||||| |||||||| |||| ||||| || |||||||| || || Sbjct 605 AATTGTTGAAACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACG 663 Query 8179 ATATTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCA 8238 ||||||||||| ||||| |||||||| || | ||||| | || ||| || | ||| Sbjct 664 ATATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCT 723 Query 8239 GTTGTCTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGAT 8298 || || || ||||| | | ||| || || || || || |||||||||||||| || || Sbjct 724 GTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAG 783 Query 8299 CCACCGAACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCT 8358 || ||||| | ||| ||||| ||| ||| || || || |||||||| ||||| ||||| Sbjct 784 CCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCG 843 Query 8359 GCTTGGAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAG 8418 ||||||||||| | ||||||||| || ||||| || || ||||| ||||| || ||||| Sbjct 844 GCTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAA 903 Query 8419 AATGAACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCA 8478 || || ||||||| |||||||| ||||| || || |||||| | || ||||| Sbjct 904 AAGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCT 963 Query 8479 CTATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTA 8538 |||||| ||| ||||| || | |||||| | ||| | | ||||||| | | Sbjct 964 GAATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGA 1023 Query 8539 CCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCG 8598 |||||||| || | |||| | |||||| | | || | | ||| ||||| ||| Sbjct 1024 CCCATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCG 1083 Query 8599 TTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATA 8658 || || ||||| ||||| | | || |||||||| || || || ||||| || || ||| Sbjct 1084 TTGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATA 1143 Query 8659 GCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCT 8718 || || | |||| | |||||||| || || ||||||||||| | || || || Sbjct 1144 GCTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCA 1203 Query 8719 GCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATA 8778 | |||||||||||||||||| || ||||| || || || |||||||| || || | ||| Sbjct 1204 GAAACAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATA 1263 Query 8779 AAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAA 8838 || || || || | || || ||| ||||| | ||| |||||||| || | ||| Sbjct 1264 AATACAGAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAA 1323 Query 8839 AGTCTGTTGTTTGTACTTGTAACCCACTCGCAAAA 8873 || | ||| | || || || | ||| | ||||| Sbjct 1324 AGACGGTTTTCAGTGCTGGTTATCCAGTTACAAAA 1358 >seq2 Length=30405870 Score = 434 bits (480), Expect = 1e-116 Identities = 696/995 (70%), Gaps = 6/995 (1%) Strand=Plus/Minus Query 7882 TCAGCAGATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATA 7941 ||| ||| |||| |||| ||||| || || ||||| | ||||||||||||||||||| Sbjct 16145562 TCAACAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 16145503 Query 7942 CCTAAGTTTGCTCTGTT--TAATACGTCACCCCATGTAGGAATGATTTTACCATTAACAT 7999 || | ||| | | ||| ||||| ||| |||| ||| ||| | ||| | | || Sbjct 16145502 CCAAGGTTAACGCGGTTAATAATA--TCAGCCCAAGTATTAATTACACGACCCTGACTAT 16145445 Query 8000 CAACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCA 8059 |||| || ||||| || || ||||| || || | ||| || ||||| || | ||||| | Sbjct 16145444 CAACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTA 16145385 Query 8060 TAGAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTAC 8119 || || ||||| | || ||| || || | | ||| |||||||| || | | | | Sbjct 16145384 AAGTGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAG 16145325 Query 8120 TGTTGTT-AAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACA 8178 ||||| |||| | ||||| |||||||| |||| ||||| || |||||||| || | Sbjct 16145324 AATTGTTGAAACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATG 16145266 Query 8179 ATATTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCA 8238 ||||||||||| ||||| |||||||| || | ||||| | || ||| || | || Sbjct 16145265 ATATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTT 16145206 Query 8239 GTTGTCTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGAT 8298 | || || ||||| | | || || || || || || |||||||||||||| || || Sbjct 16145205 ATGGTTTCCCTGATCAAACTAGGGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAG 16145146 Query 8299 CCACCGAACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCT 8358 || ||||| | ||| ||| | ||| ||| || || || |||||||| ||||| |||| Sbjct 16145145 CCGCCGAATACACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTA 16145086 Query 8359 GCTTGGAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAG 8418 ||||||||||| | ||||||||| || ||||| || || ||||| | |||| | ||||| Sbjct 16145085 GCTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAA 16145026 Query 8419 AATGAACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCA 8478 || || ||||||| |||||||| ||||| || || |||||| | || ||||| Sbjct 16145025 AAGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCT 16144966 Query 8479 CTATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTA 8538 |||||| ||| ||||| || | | |||| | ||| | | |||||||| | | Sbjct 16144965 GAATATGCAACAGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACGA 16144906 Query 8539 CCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCG 8598 |||||||| || | |||| |||||| | | || | | ||| ||||| ||| Sbjct 16144905 CCCATGTAGCAAGCTACACCAAGTGAGAAGTGTAGAACAATTAGTTCATAAGGACCACCG 16144846 Query 8599 TTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATA 8658 || || ||||| ||||| | | || |||||||| || || || ||||| | || ||| Sbjct 16144845 TTGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCTATA 16144786 Query 8659 GCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCT 8718 || || | |||| | |||||||| || || ||||||||||| | || || || Sbjct 16144785 GCTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCA 16144726 Query 8719 GCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATA 8778 | |||||||| ||||||||| || ||||| || || || |||||||| || | | ||| Sbjct 16144725 GAAACAGGTTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATAATA 16144666 Query 8779 AAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAA 8838 | || || | | || || ||| ||||| | ||| |||||||| || | ||| Sbjct 16144665 AGTACAGAAGTTGTGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAA 16144606 Query 8839 AGTCTGTTGTTTGTACTTGTAACCCACTCGCAAAA 8873 || | ||| | || || || | ||| | ||||| Sbjct 16144605 AGACAGTTTTCAGTGCTGGTTATCCAGTTACAAAA 16144571 >seq6 Length=30767194 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 8134 GCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTCTCT 8193 ||||| |||||||| |||| ||||| || |||||||| || |||||||||||||| ||| Sbjct 12498355 GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGTTTCT 12498414 Query 8194 TCTTCTTGACCAAACTTATAACC 8216 || |||||||| || | ||||| Sbjct 12498415 TCCTCTTGACCGAATATGTAACC 12498437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615860921930240