Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq192 508 2e-139 seq2 437 3e-118 seq6 91.5 4e-14 >seq192 Length=157790 Score = 508 bits (562), Expect = 2e-139 Identities = 709/987 (72%), Gaps = 8/987 (1%) Strand=Plus/Minus Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293 |||||| |||| | ||| ||| | ||||||||||| | |||||||| || || | Sbjct 1358 TTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1299 Query 41294 ATGATTCCGTGCCTCCTTG-CCGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACC 41352 ||||| || | | | ||| |||| || || |||||||| || || ||| ||||| Sbjct 1298 ATGATCCC-TACTTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCACC 1240 Query 41353 ACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAA 41412 || || || || ||||| || || ||||| || |||| || | | ||||| ||||| Sbjct 1239 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAA 1180 Query 41413 CATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAAT 41472 || || || || ||| | |||| | | | || || || | ||||| ||||| || Sbjct 1179 TATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGAT 1120 Query 41473 TTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGT 41532 |||||||| ||| | ||||||||||| | |||||||| ||||| | |||| | || Sbjct 1119 ATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGT 1060 Query 41533 ATTCCACTTCCTCATTGGCGTCT-TTGCTTACATGGGACGAGAGTGGGAACTTAGCTATC 41591 | |||||| | |||| || ||||| ||||||| || |||||||||||||| | | Sbjct 1059 TCTACACTTCTTACTTGGTGTAGCTTGCT-ACATGGGTCGTGAGTGGGAACTTAGTTTCC 1001 Query 41592 GACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTG 41651 | || || ||| | || ||||| |||||| || || |||||||| || ||||| |||| Sbjct 1000 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 941 Query 41652 CTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGA 41711 |||| ||| | | ||||| |||| || || |||||||| | ||||||| | || | Sbjct 940 CTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAA 881 Query 41712 TATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATC 41771 | ||||| || ||||||| |||| | || ||||| || |||||||| || |||||||| | Sbjct 880 TCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCACC 821 Query 41772 CTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACG 41831 | ||||||||| | || || || || ||||| || || | ||| ||||||||| | Sbjct 820 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 761 Query 41832 GTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATG 41891 | | |||| || || | || | || || || ||| | | || || | | Sbjct 760 GGTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 701 Query 41892 GTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTG 41951 |||||| || |||||||||||||| || || ||||| || || ||||| || ||||||| Sbjct 700 GTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTG 641 Query 41952 GTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTG 42011 | || | ||||||||||||||||| || || ||||| ||| | | |||||||| || | Sbjct 640 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 581 Query 42012 CTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTC--TACCATGGCTTT 42069 |||| |||||||| |||||||| |||||| | ||||| || || || |||||||| Sbjct 580 CTGCTTGGCCTGTAGTAGGTATCTGGTTTAC--CGCTTTAGGTATCAGCACTATGGCTTT 523 Query 42070 CAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAA 42129 |||||| |||||||| || || || |||||| | | | | | | || | || || || Sbjct 522 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 463 Query 42130 CACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAA 42189 || |||||||| ||| ||||||| || |||||||| | || || |||||||| || || Sbjct 462 TACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 403 Query 42190 CGCACACAACTTCCCGCTTGACCTTGC 42216 || || || ||||| || || || || Sbjct 402 TGCCCATAATTTCCCTCTAGATCTAGC 376 >seq2 Length=30405870 Score = 437 bits (484), Expect = 3e-118 Identities = 697/990 (70%), Gaps = 14/990 (1%) Strand=Plus/Plus Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293 |||||| |||| | ||| ||| | ||| ||||||| | |||||||| || || | Sbjct 16144571 TTTTGTAACTGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTG 16144630 Query 41294 ATGATTCCGTGCCTCCTTGCCGCTACAACTTGTTT---TATTATCGCCTTTGTTGGCGCA 41350 ||||| || | | | ||| | ||||||| | | |||||| | || ||| ||| Sbjct 16144631 ATGATCCC-TACTTTATTGACC--ACAACTTCTGTACTTATTATTACTTTCATTGCTGCA 16144687 Query 41351 CCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAAC 41410 || || || || || ||||| || || |||| || |||| || | | ||||| ||| Sbjct 16144688 CCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAAC 16144747 Query 41411 AACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCA 41470 || || || || || ||| | |||| | | | || || || | ||||| ||||| Sbjct 16144748 AATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCG 16144807 Query 41471 ATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACC 41530 || |||||||| ||| | ||||||||||| | |||||||| ||||| | |||| | Sbjct 16144808 ATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATT 16144867 Query 41531 GTATTCCACTTCCTCA-TTGGCGT-CTTTGCTTACATGGGACGAGAGTGGGAACTTAGCT 41588 || | ||||| |||| |||| || |||| |||||||| || |||||||| |||| | Sbjct 16144868 GTTCTACACTT-CTCACTTGGTGTAGCTTGC-TACATGGGTCGTGAGTGGGAGATTAGTT 16144925 Query 41589 ATCGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGA 41648 || || || | | | || ||||| |||||| || || |||||||| || ||||| | Sbjct 16144926 TCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTA 16144985 Query 41649 CTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGG 41708 ||||||| ||| | | ||||| |||| || || |||||||| | ||| || | | Sbjct 16144986 CTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAG 16145045 Query 41709 GGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGC 41768 | || ||||| || ||||||| |||| | || ||||| ||| ||||||| || ||||||| Sbjct 16145046 GAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATGC 16145105 Query 41769 ATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGC 41828 | || ||||||||| | || | ||||| ||||| || || | ||| |||||||| Sbjct 16145106 ACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGC 16145165 Query 41829 ACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACT 41888 | || | |||| || | | || | || || | || | | || || Sbjct 16145166 ATGGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAATG 16145225 Query 41889 ATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATT 41948 | ||||||| || |||||||||||||| || || ||||| | || ||||| || |||| Sbjct 16145226 AAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTATT 16145285 Query 41949 TTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTC 42008 |||| || | ||||||||||||||||| || || ||||| || | | |||||||| | Sbjct 16145286 TTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTTCTTCC 16145345 Query 42009 TTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTC--TACCATGGC 42066 | ||||| |||||||| |||||||| |||||| | | ||| || || ||| ||||| Sbjct 16145346 TAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTAC--CACTTTAGGTATCAGTACTATGGC 16145403 Query 42067 TTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGAT 42126 ||||||||| |||||||| || || || |||||| | | | | | | || | || || Sbjct 16145404 TTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAAT 16145463 Query 42127 CAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCG 42186 || || |||||||| ||| ||||||| | |||||||| | || || |||||||| || Sbjct 16145464 TAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACG 16145523 Query 42187 GAACGCACACAACTTCCCGCTTGACCTTGC 42216 || || || || ||||| || || || || Sbjct 16145524 TAATGCTCATAATTTCCCTCTAGATCTAGC 16145553 >seq6 Length=30767194 Score = 91.5 bits (100), Expect = 4e-14 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 ||||||| || |||||||||||||| || || |||||||| || ||||| || |||||| Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 41951 GGTCGGCTTATCTTCCAATATGCTA 41975 || || | |||||||||||||||| Sbjct 12498377 GGCCGATTGATCTTCCAATATGCTA 12498353 Score = 86.0 bits (94), Expect = 2e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 ||||||| || |||||||||||||| || || ||||||| || ||||| || |||||| Sbjct 12498661 GGTTACATATTCGGTCAAGAGGAAGAAACCTATTATATTGTAGCCGCTCATGGTTATTTT 12498602 Query 41951 GGTCGGCTTATCTTCCAATATGCTA 41975 || || | |||||||||||||||| Sbjct 12498601 GGCCGATTGATCTTCCAATATGCTA 12498577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146214066631168