Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq192 565 7e-157 seq2 497 3e-136 seq6 100 8e-17 seq1 80.6 8e-11 >seq192 Length=157790 Score = 565 bits (626), Expect = 7e-157 Identities = 735/1009 (73%), Gaps = 8/1009 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || |||||||||||| | || ||| | ||||||||||| |||| |||||| Sbjct 1367 TGGGGTCGCTTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 1308 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| ||||||| || | | | | || || | ||| |||||| | |||||||| Sbjct 1307 GGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCAT 1249 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 |||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||| | || || Sbjct 1248 TGCTGCACCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTA 1189 Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518 ||| ||||| || || ||||||||| | | |||| | | || || || | || || Sbjct 1188 TGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTT 1129 Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578 || |||| |||||||| | || |||| |||||| | ||||| || || |||||| | Sbjct 1128 TTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGA 1069 Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638 || | || | |||||| | | ||| | | ||| |||| || || |||||||| Sbjct 1068 ACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACT 1009 Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGC 42698 | | ||| || || ||| | || ||||| |||||| || || || ||||| || || Sbjct 1008 TAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGC 949 Query 42699 AGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCC 42758 || ||||| || ||| | | |||||| |||| ||||| ||||| || || ||||| Sbjct 948 TGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCC 889 Query 42759 TCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCT 42818 || || || |||||||| |||||||||||| | || ||||| || || || ||||| || Sbjct 888 CCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCT 829 Query 42819 TATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGC 42878 |||||| || || || ||| | || || || || ||||| || || || | ||| || Sbjct 828 TATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGC 769 Query 42879 TATGCATGGTAGTCTT--GTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGC 42936 ||||||||| ||| | || |||||| | | | | ||||| || ||||| ||| Sbjct 768 TATGCATGG--GTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCT 711 Query 42937 CAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCAT 42996 ||| | || |||| |||||||||||||| || || ||||| || || || || ||| Sbjct 710 GCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCAT 651 Query 42997 GGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCA 43055 ||||| ||||| || | |||||||||||||| | |||| || ||| ||| ||||| || Sbjct 650 GGTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAATTCTCGTTCTTTACA 592 Query 43056 CTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTAC 43115 ||||| || || |||||||| || || || || ||||| || || | || |||| || Sbjct 591 TTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCAC 532 Query 43116 TATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCA 43175 |||||| || ||||| ||||||||||| || || ||||| | ||||||| |||| || Sbjct 531 TATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCG 472 Query 43176 TGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCA 43235 ||| || |||||||||||||||| | || || || |||||||| | || || ||||| Sbjct 471 TGTAATTAATACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCA 412 Query 43236 CGAGCGGAATGCACATAACTTCCCGCTTGATCTTGCATCCGTGGAGGTT 43284 || || ||||| ||||| ||||| || ||||| || | || || ||| Sbjct 411 TGAACGTAATGCCCATAATTTCCCTCTAGATCTAGCTGCTGTTGAAGTT 363 >seq2 Length=30405870 Score = 497 bits (550), Expect = 3e-136 Identities = 717/1002 (72%), Gaps = 12/1002 (1%) Strand=Plus/Plus Query 42289 TTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTG 42348 |||||||||||| | || ||| | ||| ||||||| |||| ||||||||||| || Sbjct 16144571 TTTTGTAACTGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTG 16144630 Query 42349 ATGATTCCCTGTCTGCTCGCTGCTACCAC--CTGTT-TTATTGTCGCTTTCATTGCTGCC 42405 ||||| |||| | | | | || || |||| ||||| | ||||||||||||| Sbjct 16144631 ATGAT-CCCTACTTTATTGA--CCACAACTTCTGTACTTATTATTACTTTCATTGCTGCA 16144687 Query 42406 CCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAAC 42465 ||||| ||||| |||||||| |||||| ||||||| ||||| ||| | || ||||| ||| Sbjct 16144688 CCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAAC 16144747 Query 42466 AACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTTGTATTCG 42525 || || || ||||||||| | | |||| | | || || || | || || || || Sbjct 16144748 AATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCG 16144807 Query 42526 ATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCAGCTCGTC 42585 || |||||||| | || |||| |||||| | ||||| || || |||||| | || | Sbjct 16144808 ATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATT 16144867 Query 42586 GTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACTTTCGTAC 42645 || | |||||| | ||| | | ||| |||| || || ||||| || | | Sbjct 16144868 GTTCTACACTTCTCACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAGATTAGTTTC 16144927 Query 42646 CGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGCAGCGACT 42705 || || || | | | || ||||| |||||| || || || ||||| || || || ||| Sbjct 16144928 CGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 16144987 Query 42706 GCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTGGC 42765 || || ||| | | |||||| |||| ||||| ||||| || | |||| | || || Sbjct 16144988 GCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAGGA 16145047 Query 42766 ATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCAT 42825 || |||||||| |||||||||||| | || ||||| ||| | || ||||| |||||||| Sbjct 16145048 ATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATGCAC 16145107 Query 42826 CCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCAT 42885 || || || ||| | || | ||||| ||||| || || || | ||| ||||||||| Sbjct 16145108 CCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 16145167 Query 42886 GGTAGTCTT--GTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATT 42943 || ||| | || ||| || | | | | ||||| | |||| ||| ||| Sbjct 16145168 GG--GTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAATG 16145225 Query 42944 ATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACT 43003 | || |||| |||||||||||||| || || ||||| || | || || |||||||| | Sbjct 16145226 AAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTATT 16145285 Query 43004 TTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTT 43062 |||| || | |||||||||||||| | |||| || ||| | | ||||| || ||||| Sbjct 16145286 TTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAATTCTTGTTCTTTACATTTCTTC 16145344 Query 43063 CTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCG 43122 || || |||||||| || || || || ||||| || || | || ||||||||||||| Sbjct 16145345 CTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACTATGGCT 16145404 Query 43123 TTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATC 43182 || ||||| ||||||||||| || || ||||| | ||||||| |||| || ||| || Sbjct 16145405 TTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATT 16145464 Query 43183 CCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGG 43242 |||||||||||||||| | || || | |||||||| | || || ||||| || || Sbjct 16145465 AATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACGT 16145524 Query 43243 AATGCACATAACTTCCCGCTTGATCTTGCATCCGTGGAGGTT 43284 ||||| ||||| ||||| || ||||| || | || || ||| Sbjct 16145525 AATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGAAGTT 16145566 >seq6 Length=30767194 Score = 100 bits (110), Expect = 8e-17 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 43132 AATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGG 43191 ||||||||||| || || ||||| | ||||||| |||| || ||| || ||||||| Sbjct 16007662 AATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGG 16007603 Query 43192 GCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACAT 43251 ||||||||| | || | || |||||||| | || || ||||| || || ||||| ||| Sbjct 16007602 GCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAATGCTCAT 16007543 Query 43252 AACTTCCCGCTTGATCTTGCATCCGTGGAGGTT 43284 || |||| || ||| | || || || || ||| Sbjct 16007542 AATTTCCATCTAGATGTAGCTTCTGTTGAAGTT 16007510 Score = 82.4 bits (90), Expect = 2e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 42946 GGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTT 43005 || |||| |||||||||||||| || || ||||| ||||| || || |||||||| ||| Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 43006 GGACGGCTTATCTTCCAATATGC 43028 || || | |||||||||||||| Sbjct 12498377 GGCCGATTGATCTTCCAATATGC 12498355 >seq1 Length=47851208 Score = 80.6 bits (88), Expect = 8e-11 Identities = 101/136 (74%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || |||||||||||| | ||| ||| | ||||||||||| |||| |||||| Sbjct 26602279 TGGGGTCGCTTTTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTT 26602338 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| |||||| ||||| | | | | | |||| |||||| | |||||||| Sbjct 26602339 GGTGTTTTGATGA-TCCCTACTTTATTGACCTCAACTTCTGTATTTATTATTGCTTTCAT 26602397 Query 42399 TGCTGCCCCTCCGGTA 42414 |||||| ||||| ||| Sbjct 26602398 TGCTGCACCTCCAGTA 26602413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143532472745216