Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq192 471 1e-128 seq2 389 1e-103 seq6 84.2 6e-12 >seq192 Length=157790 Score = 471 bits (522), Expect = 1e-128 Identities = 702/987 (71%), Gaps = 8/987 (1%) Strand=Plus/Plus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| || || || || ||||| |||||||| || ||||||||||| | || |||||| Sbjct 376 GCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 435 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 || ||||| | | ||||||||| ||| |||| || | | ||| ||||| || Sbjct 436 GCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCAACTACAGAT 495 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 || || || ||||||||||||| ||| || ||||| |||| |||||| | || || | | Sbjct 496 TGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTAAAC 555 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || || || || ||||||| ||| || |||||||| | |||||| || || ||| Sbjct 556 CAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 615 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 || ||||| || || || |||| ||||| || || || || || || |||||||| || Sbjct 616 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAGGTT 675 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236 ||||| ||||| || || | || || | ||| || | | ||||| ||||| Sbjct 676 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 735 Query 26237 ATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACC 26296 || | || || ||||| || ||||||||| ||| || | || ||||| || Sbjct 736 ATCAAACTAGAGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 795 Query 26297 CCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACG 26356 ||||| || || ||| || ||||||||||| || || || || || ||||||||||| Sbjct 796 CCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCGGCTTGGAATACA 855 Query 26357 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGT 26416 | ||| ||||| |||||||| ||||| || || ||||| || ||| ||| || ||||| Sbjct 856 ATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAAAAGCTTCCTTGA 915 Query 26417 CCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACA 26476 || | ||||| | ||||| || || ||| || | | || |||| |||||||||| Sbjct 916 CCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 975 Query 26477 AATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATAT-GC 26535 ||||| || | ||| || || | | || |||||||||| | || ||| | || Sbjct 976 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC--CATGTAGC 1033 Query 26536 -TGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCC 26594 ||||| || | ||||||||| | | ||| |||| ||| || || || ||||||| || Sbjct 1034 AAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACC 1093 Query 26595 ACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGG 26654 | || || | | | |||||||| ||||||||||| || | || || || ||||| Sbjct 1094 ATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATAGCTGCAGAGG 1153 Query 26655 AGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCT 26714 || | | || || || || ||||||||||| || | ||| || || ||||| || | Sbjct 1154 TAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGAAACAGGTT 1213 Query 26715 CACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTA 26773 |||| || ||||| |||||||| || ||||| || ||||| |||| ||||| ||| | | Sbjct 1214 CACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATAAATACA-GAA 1272 Query 26774 GTGGCTG-CGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTT 26832 || || | | | ||| |||| ||||| | || || |||||||| | || |||||||| Sbjct 1273 GTTGCGGTCAATAAAGTAGGG-ATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 1331 Query 26833 CTCAGTACTTGTAACCCACTCACAAAA 26859 ||||| || || | ||| | |||||| Sbjct 1332 TTCAGTGCTGGTTATCCAGTTACAAAA 1358 >seq2 Length=30405870 Score = 389 bits (430), Expect = 1e-103 Identities = 686/988 (69%), Gaps = 10/988 (1%) Strand=Plus/Minus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| || || || || |||||||||||||| || ||||||||||| | || |||||| Sbjct 16145553 GCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 16145494 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 | ||||| | | ||||||||| ||| |||| || | | ||| ||||| || Sbjct 16145493 ACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCAACTACAGAT 16145434 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 || || || ||||||||||||| ||| || ||||| || | |||||| | || || | | Sbjct 16145433 TGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTAAAGTGGTAAAC 16145374 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || || || || ||||||| ||| || |||||||| | ||||| || || ||| Sbjct 16145373 CAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAGAATTGTTGAAA 16145314 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 || ||||| || || || |||| ||||| || || || || || | |||||||| || Sbjct 16145313 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGATATTATAGGTT 16145254 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236 ||||| ||||| || || | || || | ||| || | | | | | ||||| Sbjct 16145253 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATGGTTTCCCTG 16145194 Query 26237 AT-AAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAAC 26295 || || ||| || ||||| || ||||||||| ||| || | || ||||| || Sbjct 16145193 ATCAAACTAGGG-GTTACCAAGGACCCATGCATAGCACTGAATAGGGAGCCGCCGAATAC 16145135 Query 26296 CCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATAC 26355 || || | || ||| || ||||||||||| || || || || | ||||||||||| Sbjct 16145134 ACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAGCTTGGAATAC 16145075 Query 26356 GAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTG 26415 | ||| ||||| |||||||| ||||| || || | |||| | ||| ||| || ||||| Sbjct 16145074 AATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAAAAGCTTCCTTG 16145015 Query 26416 TCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAAC 26475 || | ||||| | ||||| || || ||| || | | || |||| ||||||||| Sbjct 16145014 ACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAAC 16144955 Query 26476 AAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATAT-G 26534 | ||||| || | | | || || | | || | ||||||| | || ||| | | Sbjct 16144954 AGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACGACC--CATGTAG 16144897 Query 26535 CT-GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGC 26593 | ||||| || | | ||||||| | | ||| |||| ||| || || || ||||||| | Sbjct 16144896 CAAGCTACACCAAGTGAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAAC 16144837 Query 26594 CACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAG 26653 || || || | | | |||||||| ||||||||||| || | || || || |||| Sbjct 16144836 CATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCTATAGCTGCAGAG 16144777 Query 26654 GAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGC 26713 | || | | || || || || ||||||||||| || | ||| || || ||||| || Sbjct 16144776 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGAAACAGGT 16144717 Query 26714 TCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAA-AACATGT 26772 | ||| || ||||| |||||||| || ||||| || ||||| | || |||| ||| | Sbjct 16144716 TTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATAATAAGTACA-GA 16144658 Query 26773 AGTGGCTG-CGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGT 26831 ||| | | | | ||| |||| ||||| | || || |||||||| | || |||| || Sbjct 16144657 AGTTGTGGTCAATAAAGTAGGG-ATCATCAAAACACCAAACCATCCAATGTAAAGACAGT 16144599 Query 26832 TCTCAGTACTTGTAACCCACTCACAAAA 26859 | ||||| || || | ||| | |||||| Sbjct 16144598 TTTCAGTGCTGGTTATCCAGTTACAAAA 16144571 >seq6 Length=30767194 Score = 84.2 bits (92), Expect = 6e-12 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25874 GATGCTAAGTCAAG-TGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAG 25932 || |||| || || |||||| |||||||||||||| || |||||||| || | || || Sbjct 16007520 GAAGCTACATCTAGATGGAAA-TTATGAGCATTACGTTCATGCATAACGTCCATACCAAG 16007578 Query 25933 GTTAGCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTAC 25992 |||||| |||| | | ||||||||| ||| |||| || | | ||| ||||| Sbjct 16007579 GTTAGCGTGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCAACTAC 16007638 Query 25993 TGACTGGTTAAAGTTAAAACCATTTAGGTT 26022 || || || || ||||||||||| || || Sbjct 16007639 AGATTGATTGAAATTAAAACCATTGAGTTT 16007668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147711663216640