Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq192 544 9e-150 seq2 475 4e-129 seq6 89.7 6e-13 >seq192 Length=157790 Score = 544 bits (602), Expect = 9e-150 Identities = 705/973 (72%), Gaps = 6/973 (1%) Strand=Plus/Minus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | || | || ||||| |||||| | ||||||||| | | | | Sbjct 1336 CTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCG 1277 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | || | || ||| | || ||||||||||||||||| ||||| ||||||||||||| Sbjct 1276 CAACTTCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTC 1217 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 ||||||| || |||| |||||| | ||||| ||||| || || |||||||| || | | Sbjct 1216 GTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTC 1157 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 ||| || || || ||| | ||||| || || || |||||||| || | |||||| Sbjct 1156 CTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATG 1097 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCA 155290 | ||||| ||||| |||||||||| |||| | || | |||||| | | || | Sbjct 1096 AATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAG 1037 Query 155291 CAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCT 155350 | ||| |||||| ||||||||||| || |||||| || ||||| |||||||| Sbjct 1036 CTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTG 977 Query 155351 GTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCG 155410 ||||||||| || || || || | ||||| ||||| ||| | | ||||| | | Sbjct 976 CTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTG 917 Query 155411 GTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGT 155470 ||||||| || ||||| | ||||| || || ||||| |||||||| |||| ||| Sbjct 916 GTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGA 857 Query 155471 TCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAG 155530 | || |||||||| || ||||| |||||||||||||| || |||||| | || ||||| | Sbjct 856 TTGTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTG 797 Query 155531 GTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAA 155590 |||| ||||| || || || ||| ||||||||| || || ||||| || ||| | | Sbjct 796 GTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGTTTGA 737 Query 155591 TCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAG 155650 || | ||||| || || | || ||| || | ||||||| ||||| ||||| |||| Sbjct 736 TCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAG 677 Query 155651 AAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCAT 155710 |||| ||||| || || || |||||||| || || || || | |||||||| ||||| Sbjct 676 AAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTA 617 Query 155711 CCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCT 155770 |||||||| || | | | || |||||||| ||||| |||||||| || | |||| Sbjct 616 GTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCT 557 Query 155771 GGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACC 155830 || || ||| | ||| | || ||||| |||||| | || ||||| || ||||| | Sbjct 556 GGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATC 497 Query 155831 AGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACC 155887 | |||||||| || |||| ||| || || ||| ||||| || ||| |||||| Sbjct 496 AATCTGTAGTTGA---TAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACC 440 Query 155888 GCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACC 155947 ||||| |||||||||||||| ||||| || ||||| || || || |||||||| || | Sbjct 439 GCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATC 380 Query 155948 TTGCTGCTGCTGA 155960 | ||||||| ||| Sbjct 379 TAGCTGCTGTTGA 367 >seq2 Length=30405870 Score = 475 bits (526), Expect = 4e-129 Identities = 640/890 (72%), Gaps = 6/890 (1%) Strand=Plus/Plus Query 155074 TTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTA 155133 ||||||||||||||||| ||||| ||||||||||||||| |||| || |||| |||||| Sbjct 16144676 TTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTA 16144735 Query 155134 ATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTC 155193 | ||||| ||||| || || |||||||| || | |||| || || || ||| | Sbjct 16144736 CTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATG 16144795 Query 155194 CACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCT 155253 ||||| || || || |||||||| || | ||||||| ||||| ||||| ||||||||| Sbjct 16144796 CACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCT 16144855 Query 155254 TTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGG 155313 | |||| | || | |||||| | || | | ||| |||||| ||||| Sbjct 16144856 TATGAACTAATTGTTCTACACTTCTCACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGG 16144915 Query 155314 GAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTA 155373 || || || |||||| || | ||| |||||||| ||||||||| || || || || Sbjct 16144916 GAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 16144975 Query 155374 TCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCG 155433 | ||||| ||||| ||| | | ||||| | |||||||| || ||||| | Sbjct 16144976 GCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTA 16145035 Query 155434 ATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAAT 155493 ||| | || || ||||| |||||||| |||| ||| | || |||||||| | ||||| Sbjct 16145036 ATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAAC 16145095 Query 155494 ATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTC 155553 |||||||||||||| || |||||| | || | ||| ||||| ||||| || || || ||| Sbjct 16145096 ATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTC 16145155 Query 155554 TCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAG 155613 ||||||||| || || ||||| || || | ||| | ||||| | | | || Sbjct 16145156 AGTGCTATGCATGGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAA 16145215 Query 155614 TCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCT 155673 ||| || | ||||||| ||||| ||||| |||||||| ||||| || | || ||| Sbjct 16145216 TCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCT 16145275 Query 155674 CATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTT 155733 ||||| || || || || | |||||||| ||||| |||||||| || | | | Sbjct 16145276 CATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTA 16145335 Query 155734 CACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCA 155793 || |||||||| ||||| |||||||| || | |||||| || || | ||| | Sbjct 16145336 CATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGT 16145395 Query 155794 ACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT--- 155850 || ||||| |||||| | || ||||| || ||||| || |||||||| || |||| Sbjct 16145396 ACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGA---TAGTCAG 16145452 Query 155851 GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTA 155910 ||| || || ||| ||||| || ||| ||||||||| | |||||||||||||| Sbjct 16145453 GGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTT 16145512 Query 155911 ATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 155960 ||||| || ||||| ||||| || |||||||| || || ||||||| ||| Sbjct 16145513 ATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq6 Length=30767194 Score = 89.7 bits (98), Expect = 6e-13 Identities = 116/159 (73%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 155805 CAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCAT 155861 ||| || || ||||| || ||||| || |||||||| || |||| ||| || || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGA---TAGTCAGGGTCGTGTAAT 16007613 Query 155862 CCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCG 155921 ||| ||||| || ||| |||||| |||| ||||||||||| || ||||| || || Sbjct 16007612 TAATACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACG 16007553 Query 155922 TAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 155960 ||| ||||| || |||| ||| || | ||| ||| ||| Sbjct 16007552 TAATGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584833796395520