Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq192 497 3e-136 seq2 421 2e-113 seq6 95.1 3e-15 >seq192 Length=157790 Score = 497 bits (550), Expect = 3e-136 Identities = 711/996 (71%), Gaps = 8/996 (1%) Strand=Plus/Plus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||||| |||||||| || || || || ||||| || ||||| ||||||||| Sbjct 367 TCAACAGCAGCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATA 426 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 || || | | ||||| || ||||||||||||| ||| || ||| | | || Sbjct 427 CCAAGGTTAGCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 486 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 ||||| || || || || ||||||||||| | ||| ||||||||||| ||||| | Sbjct 487 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAA 546 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTA 40763 | ||||| ||| || || | || || ||||| | || ||||| |||| | ||| | Sbjct 547 GCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 606 Query 40764 TTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATG 40823 |||||||| ||||||||| || || | || ||||| ||||| || || |||||||| Sbjct 607 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 666 Query 40824 TTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTG 40883 ||||| || || | || ||||| || | || || | || |||||| |||| ||| Sbjct 667 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 726 Query 40884 GTCTCCCGAATGA---TTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCA 40940 || |||| || | | |||| || ||||| || ||||||||| || | | Sbjct 727 GTTTCCCTGATCAAACTAGAGGT--TACCAAGGAC-CCATGCATAGCACTGAATAGGGAG 783 Query 40941 CCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCT 41000 || || || || || || ||||| | ||| || ||||||||||| || |||||||| || Sbjct 784 CCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCG 843 Query 41001 GCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAG 41060 |||||||| |||| |||||||||||| || || |||||||| |||||||| ||||| Sbjct 844 GCTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAA 903 Query 41061 AAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCT 41120 || || ||||| | |||||| | ||||| ||||| ||| |||| | |||||| Sbjct 904 AAGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCT 963 Query 41121 GTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTA 41180 | ||||| ||| ||||| || | |||||| || | | | ||||||||||| | | Sbjct 964 GAATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGA 1023 Query 41181 CCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCG 41240 || ||| ||||| || | ||| ||||| | ||||| |||| ||| || || ||| Sbjct 1024 CCCATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCG 1083 Query 41241 TTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATT 41300 ||||||| ||| || || | | | |||||||| || ||||| || || | || || Sbjct 1084 TTGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATA 1143 Query 41301 GCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCG 41360 || |||| | |||| | || ||||| ||||||||||| || || | ||| || || Sbjct 1144 GCTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCA 1203 Query 41361 GAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATG 41420 ||||| || ||||| || ||||| |||||||| || ||||| || || || || || || Sbjct 1204 GAAACAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATA 1263 Query 41421 AA-ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTA 41479 || ||| | || || || | ||| | || ||||| | ||||||||||| || | ||| Sbjct 1264 AATACA-GAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTA 1322 Query 41480 TAGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 || ||||| || ||||| || | |||||||||||| Sbjct 1323 AAGACGGTTTTCAGTGCTGGTTATCCAGTTACAAAA 1358 >seq2 Length=30405870 Score = 421 bits (466), Expect = 2e-113 Identities = 693/994 (70%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||| ||||| |||||||| || || ||||| ||||| || ||||| ||||||||| Sbjct 16145562 TCAACAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 16145503 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 || || | | ||||| || ||||||||||||| ||| || ||| | | || Sbjct 16145502 CCAAGGTTAACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 16145443 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 ||||| || || || || ||||||||||| | ||| |||||||||||| ||||| | Sbjct 16145442 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTAAA 16145383 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTA 40763 | ||||| ||| || || | || || ||||| | || ||||| |||| | || | Sbjct 16145382 GTGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAGAA 16145323 Query 40764 TTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATG 40823 |||||||| ||||||||| || || | || ||||| ||||| || || |||| ||| Sbjct 16145322 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGATA 16145263 Query 40824 TTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTG 40883 ||||| || || | || ||||| || | || || | || |||||| ||| || Sbjct 16145262 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATG 16145203 Query 40884 GTCTCCCGAATGATTG-AGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACC 40942 || |||| || | ||| || ||||| || ||||||||| || | | || Sbjct 16145202 GTTTCCCTGATCAAACTAGGGGTTACCAAGGAC-CCATGCATAGCACTGAATAGGGAGCC 16145144 Query 40943 ACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGC 41002 || || || || || |||| | ||| || ||||||||||| || |||||||| | || Sbjct 16145143 GCCGAATACACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAGC 16145084 Query 41003 TTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAA 41062 |||||| |||| |||||||||||| || || |||||||| | ||| | ||||| || Sbjct 16145083 TTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAAAA 16145024 Query 41063 AGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGT 41122 || ||||| | |||||| | ||||| ||||| ||| |||| | ||||||| Sbjct 16145023 GCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGA 16144964 Query 41123 GTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACC 41182 ||||| ||| ||||| || | | |||| || | | | || ||||||| | ||| Sbjct 16144963 ATATGCAACAGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACGACC 16144904 Query 41183 AGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTT 41242 ||| ||||| || | | | ||||| | ||||| |||| ||| || || ||||| Sbjct 16144903 CATGTAGCAAGCTACACCAAGTGAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTT 16144844 Query 41243 GTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGC 41302 ||||| ||| || || | | | |||||||| || ||||| || || | || || || Sbjct 16144843 GTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCTATAGC 16144784 Query 41303 GTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGA 41362 |||| | |||| | || ||||| ||||||||||| || || | ||| || || || Sbjct 16144783 TGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGA 16144724 Query 41363 AACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGA- 41421 ||| || | ||| || ||||| |||||||| || ||||| || || || | || || | Sbjct 16144723 AACAGGTTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATAATAAG 16144664 Query 41422 AACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATA 41481 ||| | || | || | ||| | || ||||| | ||||||||||| || | ||| | Sbjct 16144663 TACA-GAAGTTGTGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAA 16144605 Query 41482 GGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 | | ||| || ||||| || | |||||||||||| Sbjct 16144604 GACAGTTTTCAGTGCTGGTTATCCAGTTACAAAA 16144571 >seq6 Length=30767194 Score = 95.1 bits (104), Expect = 3e-15 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| ||||||||| |||||| | || || ||||| ||||| || ||||| || |||||| Sbjct 16007514 TCAACAGAAGCTACATCTAGATGGAAATTATGAGCATTACGTTCATGCATAACGTCCATA 16007573 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 || || | ||||| || ||||||||||||| ||| || ||| | | || Sbjct 16007574 CCAAGGTTAGCGTGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 16007633 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTT 40678 ||||| || || || || |||||||||||||| || Sbjct 16007634 ACTACAGATTGATTGAAATTAAAACCATTGAGTTT 16007668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143702072358528