Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq192 542 3e-149 seq2 477 1e-129 >seq192 Length=157790 Score = 542 bits (600), Expect = 3e-149 Identities = 716/991 (72%), Gaps = 4/991 (0%) Strand=Plus/Plus Query 67353 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATT 67412 ||| ||||||| || || |||||||| || || || ||||| || |||||||||||||| Sbjct 367 TCAACAGCAGCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATA 426 Query 67413 CCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGT-- 67470 ||||| || | ||||| || || ||||||||| ||| || ||| ||| | Sbjct 427 CCAAGGTTAGCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACC--CTGACTAT 484 Query 67471 CAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCA 67530 |||| || ||||| ||||| || ||||| || | |||||| |||||||| | ||| | Sbjct 485 CAACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTA 544 Query 67531 TTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTG 67590 || || |||||||| | || ||||| | ||||| |||||||| || | | | | Sbjct 545 AAGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAG 604 Query 67591 AGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAA 67650 | ||||||||| ||||| ||||||||||| || || || || |||||||| || || | Sbjct 605 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGA 664 Query 67651 TGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAG 67710 | || || || ||||| ||||| ||||| ||||||| | || || || | || | Sbjct 665 TATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTG 724 Query 67711 TAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAAC 67770 | ||||| ||||| | | ||| || || | || || ||||||||||| || || || | Sbjct 725 TGGTTTCCCTGATCAAACTAGAGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGC 784 Query 67771 CACCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTG 67830 | ||||||||||| ||||| || | ||| || |||||||||||||||||||||||||| | Sbjct 785 CGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCGG 844 Query 67831 CTTGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGA 67890 ||||||| || | |||| |||| |||||||| || || || || ||||| ||||||| | Sbjct 845 CTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAAA 904 Query 67891 AAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAG 67950 | |||||||| | ||||| | |||||| ||||| || || | || ||||| | Sbjct 905 AGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTG 964 Query 67951 AGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGAC 68010 | ||||| ||| |||||||| |||||||| |||||| || ||||||||||| ||||| Sbjct 965 AATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGAC 1024 Query 68011 CACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCAT 68070 | ||| | | || | | |||||| | || | |||| |||| ||||| | Sbjct 1025 CCATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGT 1084 Query 68071 TATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTG 68130 | || ||||| ||||| | | || |||||||| || || || ||||| | ||| || | Sbjct 1085 TGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATAG 1144 Query 68131 CGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTG 68190 | || |||||| || ||||||||||| || ||||| || || | | || || | Sbjct 1145 CTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAG 1204 Query 68191 CAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGA 68250 ||||||||| | |||||||| ||||| ||||||||||| |||||||| ||||| || | Sbjct 1205 AAACAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATAA 1264 Query 68251 AGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGA 68310 | || | ||| | | || ||| |||||||| ||||| ||||| |||| || | Sbjct 1265 ATACAGAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAA 1324 Query 68311 TGCGATTGTCAACTGAGGTGACCCAGTTACA 68341 || || ||| ||| | ||||||||| Sbjct 1325 GACGGTTTTCAGTGCTGGTTATCCAGTTACA 1355 >seq2 Length=30405870 Score = 477 bits (528), Expect = 1e-129 Identities = 685/958 (72%), Gaps = 12/958 (1%) Strand=Plus/Minus Query 67353 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATT 67412 ||| ||||||| || || |||||||| || ||||| ||||| || |||||||||||||| Sbjct 16145562 TCAACAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 16145503 Query 67413 CCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGT-- 67470 ||||| | | ||||| || || ||||||||| ||| || ||| ||| | Sbjct 16145502 CCAAGGTTAACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACC--CTGACTAT 16145445 Query 67471 CAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCA 67530 |||| || ||||| ||||| || ||||| || | |||||| |||||||| | ||| | Sbjct 16145444 CAACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTA 16145385 Query 67531 TTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTG 67590 | || |||||||| | || ||||| | ||||| |||||||| || | | | | Sbjct 16145384 AAGTGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAG 16145325 Query 67591 AGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAA 67650 | ||||||||| ||||| ||||||||||| || || || || |||||||| || | | Sbjct 16145324 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGA 16145265 Query 67651 TGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAG 67710 | || || || ||||| ||||| ||||| ||||||| | || || || | | Sbjct 16145264 TATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTA 16145205 Query 67711 TAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAAC 67770 | ||||| ||||| | | || || || | || || ||||||||||| || || || | Sbjct 16145204 TGGTTTCCCTGATCAAACTAGGGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGC 16145145 Query 67771 CACCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTG 67830 | ||||||||||| ||| | || | ||| || ||||||||||||||||||||||||| | Sbjct 16145144 CGCCGAATACACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAG 16145085 Query 67831 CTTGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGA 67890 ||||||| || | |||| |||| |||||||| || || || || | |||| ||||||| | Sbjct 16145084 CTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAAA 16145025 Query 67891 AAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAG 67950 | |||||||| | ||||| | |||||| ||||| || || | || ||||| | Sbjct 16145024 AGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTG 16144965 Query 67951 AGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGAC 68010 | ||||| ||| |||||||| ||| |||| |||||| || || ||||||| ||||| Sbjct 16144964 AATATGCAACAGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACGAC 16144905 Query 68011 CACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCAT 68070 | ||| | | || | |||||| | || | |||| |||| ||||| | Sbjct 16144904 CCATGTAGCAAGCTACACCAAGTGAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGT 16144845 Query 68071 TATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTG 68130 | || ||||| ||||| | | || |||||||| || || || ||||| | ||| || | Sbjct 16144844 TGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCTATAG 16144785 Query 68131 CGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTG 68190 | || |||||| || ||||||||||| || ||||| || || | | || || | Sbjct 16144784 CTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAG 16144725 Query 68191 CAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGA 68250 |||||||| | |||||||| ||||| ||||||||||| |||||||| | ||| || | Sbjct 16144724 AAACAGGTTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATAAT-A 16144666 Query 68251 AG----CAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAA 68304 || |||||| || | | | ||| ||| |||||||| ||||| ||||| |||| Sbjct 16144665 AGTACAGAAGTTG-TGGT-CAATAAAG-TAGGGATCATCAAAACACCAAACCATCCAA 16144611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566945839326720